RNA–Protein interactions for RNA: ENST00000554567.1

KTN1-215, Transcript of kinectin 1, humanhuman

TSL 5

Gene KTN1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-215ENST00000554567 MTF2Q9Y483 593 aaPredicted RBP29.17■■■□□ 2.26
KTN1-215ENST00000554567 COL4A3Q01955 1670 aa29.17■■■□□ 2.26
KTN1-215ENST00000554567 TMEM189-UBE2V1I3L0A0 370 aa29.16■■■□□ 2.26
KTN1-215ENST00000554567 TRAPPC3O43617 180 aa29.16■■■□□ 2.26
KTN1-215ENST00000554567 OSTNP61366 133 aa29.16■■■□□ 2.26
KTN1-215ENST00000554567 UPP1Q16831 310 aa29.16■■■□□ 2.26
KTN1-215ENST00000554567 TTC38Q5R3I4 469 aa29.16■■■□□ 2.26
KTN1-215ENST00000554567 CD300LGQ6UXG3 332 aa29.16■■■□□ 2.26
KTN1-215ENST00000554567 APBB1IPQ7Z5R6 666 aaPredicted RBP29.16■■■□□ 2.26
KTN1-215ENST00000554567 NPAS3Q8IXF0 933 aa29.16■■■□□ 2.26
KTN1-215ENST00000554567 KIFAP3Q92845 792 aa29.16■■■□□ 2.26
KTN1-215ENST00000554567 MCRS1Q96EZ8 462 aa29.16■■■□□ 2.26
KTN1-215ENST00000554567 BCO2Q9BYV7 579 aa29.16■■■□□ 2.26
KTN1-215ENST00000554567 SPATA6Q9NWH7 488 aaPredicted RBP29.16■■■□□ 2.26
KTN1-215ENST00000554567 KIAA1024Q9UPX6 916 aa29.16■■■□□ 2.26
KTN1-215ENST00000554567 CD72P21854 359 aa29.15■■■□□ 2.26
KTN1-215ENST00000554567 GNL2Q13823 731 aaKnown RBP29.15■■■□□ 2.26
KTN1-215ENST00000554567 ANKS3Q6ZW76 656 aa29.15■■■□□ 2.26
KTN1-215ENST00000554567 CCDC83Q8IWF9 413 aa29.15■■■□□ 2.26
KTN1-215ENST00000554567 C3orf58Q8NDZ4 430 aa29.15■■■□□ 2.26
KTN1-215ENST00000554567 DDX27Q96GQ7 796 aaKnown RBP29.15■■■□□ 2.26
KTN1-215ENST00000554567 UROC1Q96N76 676 aa29.15■■■□□ 2.26
KTN1-215ENST00000554567 KCNH3Q9ULD8 1083 aa29.15■■■□□ 2.26
KTN1-215ENST00000554567 BACE2Q9Y5Z0 518 aa29.15■■■□□ 2.26
KTN1-215ENST00000554567 TRIP11Q15643 1979 aa29.15■■■□□ 2.26
KTN1-215ENST00000554567 CACNA1IQ9P0X4 2223 aa29.14■■■□□ 2.26
KTN1-215ENST00000554567 SMIM28A0A1B0GU29 152 aa29.14■■■□□ 2.26
KTN1-215ENST00000554567 FAM170BA6NMN3 283 aa29.14■■■□□ 2.26
KTN1-215ENST00000554567 CCDC169A6NNP5 214 aa29.14■■■□□ 2.26
KTN1-215ENST00000554567 YARSP54577 528 aaKnown RBP29.14■■■□□ 2.26
KTN1-215ENST00000554567 PFKPQ01813 784 aa29.14■■■□□ 2.26
KTN1-215ENST00000554567 PRKCQQ04759 706 aa29.14■■■□□ 2.26
KTN1-215ENST00000554567 ORC2Q13416 577 aaPredicted RBP29.14■■■□□ 2.26
KTN1-215ENST00000554567 MAML2Q8IZL2 1156 aaPredicted RBP29.14■■■□□ 2.26
KTN1-215ENST00000554567 CEP120Q8N960 986 aa29.14■■■□□ 2.26
KTN1-215ENST00000554567 FOXP1Q9H334 677 aaPredicted RBP29.14■■■□□ 2.26
KTN1-215ENST00000554567 LRWD1Q9UFC0 647 aa29.14■■■□□ 2.26
KTN1-215ENST00000554567 TNFSF13BQ9Y275 285 aa29.14■■■□□ 2.26
KTN1-215ENST00000554567 NOTCH4Q99466 2003 aa29.13■■■□□ 2.25
KTN1-215ENST00000554567 RHOP08100 348 aa29.13■■■□□ 2.25
KTN1-215ENST00000554567 POU2F2P09086 479 aa29.13■■■□□ 2.25
KTN1-215ENST00000554567 MUTP22033 750 aa29.13■■■□□ 2.25
KTN1-215ENST00000554567 ARPP19P56211 112 aa29.13■■■□□ 2.25
KTN1-215ENST00000554567 NBR1Q14596 966 aa29.13■■■□□ 2.25
KTN1-215ENST00000554567 DCLK2Q8N568 766 aa29.13■■■□□ 2.25
KTN1-215ENST00000554567 RMDN1Q96DB5 314 aa29.13■■■□□ 2.25
KTN1-215ENST00000554567 DDX23Q9BUQ8 820 aaKnown RBP29.13■■■□□ 2.25
KTN1-215ENST00000554567 CCDC94Q9BW85 323 aaPredicted RBP29.13■■■□□ 2.25
KTN1-215ENST00000554567 DDX19AQ9NUU7 478 aaKnown RBP29.13■■■□□ 2.25
KTN1-215ENST00000554567 MIA3Q5JRA6 1907 aa29.13■■■□□ 2.25
KTN1-215ENST00000554567 LAMTOR5O43504 91 aa29.12■■■□□ 2.25
KTN1-215ENST00000554567 ELF1P32519 619 aa29.12■■■□□ 2.25
KTN1-215ENST00000554567 PEX3P56589 373 aa29.12■■■□□ 2.25
KTN1-215ENST00000554567 SOX4Q06945 474 aaPredicted RBP29.12■■■□□ 2.25
KTN1-215ENST00000554567 TOPORSQ9NS56 1045 aaPredicted RBP29.12■■■□□ 2.25
KTN1-215ENST00000554567 PRRG1O14668 218 aa29.11■■■□□ 2.25
KTN1-215ENST00000554567 LRG1P02750 347 aa29.11■■■□□ 2.25
KTN1-215ENST00000554567 GRM5P41594 1212 aa29.11■■■□□ 2.25
KTN1-215ENST00000554567 SLC5A9Q2M3M2 681 aa29.11■■■□□ 2.25
KTN1-215ENST00000554567 ZNF568Q3ZCX4 644 aa29.11■■■□□ 2.25
KTN1-215ENST00000554567 RTL10Q7L3V2 364 aa29.11■■■□□ 2.25
KTN1-215ENST00000554567 RUBCNQ92622 972 aa29.11■■■□□ 2.25
KTN1-215ENST00000554567 ACO2Q99798 780 aaKnown RBP29.11■■■□□ 2.25
KTN1-215ENST00000554567 PLA2G2FQ9BZM2 168 aa29.11■■■□□ 2.25
KTN1-215ENST00000554567 CDT1Q9H211 546 aa29.11■■■□□ 2.25
KTN1-215ENST00000554567 LIMCH1Q9UPQ0 1083 aa29.11■■■□□ 2.25
KTN1-215ENST00000554567 KINO60870 393 aaKnown RBP29.1■■■□□ 2.25
KTN1-215ENST00000554567 NEFLP07196 543 aa29.1■■■□□ 2.25
KTN1-215ENST00000554567 NPTX2P47972 431 aa29.1■■■□□ 2.25
KTN1-215ENST00000554567 FXR2P51116 673 aaKnown RBP eCLIP29.1■■■□□ 2.255e-8■■□□□ 14.1
KTN1-215ENST00000554567 ROR1Q01973 937 aa29.1■■■□□ 2.25
KTN1-215ENST00000554567 CSTF1Q05048 431 aaKnown RBP29.1■■■□□ 2.25
KTN1-215ENST00000554567 TPRG1Q6ZUI0 275 aa29.1■■■□□ 2.25
KTN1-215ENST00000554567 C4orf32Q8N8J7 132 aa29.1■■■□□ 2.25
KTN1-215ENST00000554567 ZNF461Q8TAF7 563 aa29.1■■■□□ 2.25
KTN1-215ENST00000554567 TCHPQ9BT92 498 aa29.1■■■□□ 2.25
KTN1-215ENST00000554567 LTB4R2Q9NPC1 389 aa29.1■■■□□ 2.25
KTN1-215ENST00000554567 ZNF292O60281 2723 aa29.1■■■□□ 2.25
KTN1-215ENST00000554567 PODXLO00592 558 aa29.09■■■□□ 2.25
KTN1-215ENST00000554567 PTPN2P17706 415 aa29.09■■■□□ 2.25
KTN1-215ENST00000554567 VARS2Q5ST30 1063 aaKnown RBP29.09■■■□□ 2.25
KTN1-215ENST00000554567 ZBTB41Q5SVQ8 909 aa29.09■■■□□ 2.25
KTN1-215ENST00000554567 ALKAL1Q6UXT8 129 aa29.09■■■□□ 2.25
KTN1-215ENST00000554567 SNX29Q8TEQ0 813 aa29.09■■■□□ 2.25
KTN1-215ENST00000554567 ZMAT2Q96NC0 199 aaKnown RBP29.09■■■□□ 2.25
KTN1-215ENST00000554567 CORO1BQ9BR76 489 aa29.09■■■□□ 2.25
KTN1-215ENST00000554567 TARS2Q9BW92 718 aaKnown RBP29.09■■■□□ 2.25
KTN1-215ENST00000554567 SLC38A7Q9NVC3 462 aa29.09■■■□□ 2.25
KTN1-215ENST00000554567 GDE1Q9NZC3 331 aa29.09■■■□□ 2.25
KTN1-215ENST00000554567 NOL7Q9UMY1 257 aaKnown RBP29.09■■■□□ 2.25
KTN1-215ENST00000554567 E9PMD0 336 aa29.08■■■□□ 2.25
KTN1-215ENST00000554567 ECI2O75521 394 aa29.08■■■□□ 2.25
KTN1-215ENST00000554567 CEBPBP17676 345 aa29.08■■■□□ 2.25
KTN1-215ENST00000554567 TANGO2Q6ICL3 276 aa29.08■■■□□ 2.25
KTN1-215ENST00000554567 FBXO18Q8NFZ0 1043 aa29.08■■■□□ 2.25
KTN1-215ENST00000554567 MRPL4Q9BYD3 311 aaKnown RBP29.08■■■□□ 2.25
KTN1-215ENST00000554567 OSBPL6Q9BZF3 934 aa29.08■■■□□ 2.25
KTN1-215ENST00000554567 DAXXQ9UER7 740 aaPredicted RBP29.08■■■□□ 2.25
KTN1-215ENST00000554567 PHLPP2Q6ZVD8 1323 aa29.08■■■□□ 2.25
KTN1-215ENST00000554567 FANCMQ8IYD8 2048 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms