RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 KNOP1Q1ED39 458 aaKnown RBP15.36■□□□□ 0.05
PTCH1-226ENST00000553011 VPS52Q8N1B4 723 aa15.36■□□□□ 0.05
PTCH1-226ENST00000553011 MICAL1Q8TDZ2 1067 aa15.36■□□□□ 0.05
PTCH1-226ENST00000553011 HASPINQ8TF76 798 aa15.36■□□□□ 0.05
PTCH1-226ENST00000553011 NOC3LQ8WTT2 800 aaKnown RBP15.36■□□□□ 0.05
PTCH1-226ENST00000553011 KIF12Q96FN5 646 aa15.36■□□□□ 0.05
PTCH1-226ENST00000553011 TCF25Q9BQ70 676 aa15.36■□□□□ 0.05
PTCH1-226ENST00000553011 FAM213AQ9BRX8 229 aa15.36■□□□□ 0.05
PTCH1-226ENST00000553011 COLEC11Q9BWP8 271 aa15.36■□□□□ 0.05
PTCH1-226ENST00000553011 PRDM6Q9NQX0 595 aa15.36■□□□□ 0.05
PTCH1-226ENST00000553011 ENTPD7Q9NQZ7 604 aa15.36■□□□□ 0.05
PTCH1-226ENST00000553011 AGPAT3Q9NRZ7 376 aa15.36■□□□□ 0.05
PTCH1-226ENST00000553011 PCDHA5Q9Y5H7 936 aa15.36■□□□□ 0.05
PTCH1-226ENST00000553011 CLIC2O15247 247 aa15.35■□□□□ 0.05
PTCH1-226ENST00000553011 KIF4AO95239 1232 aa15.35■□□□□ 0.05
PTCH1-226ENST00000553011 ADRB2P07550 413 aa15.35■□□□□ 0.05
PTCH1-226ENST00000553011 CLCNKBP51801 687 aa15.35■□□□□ 0.05
PTCH1-226ENST00000553011 GUCY2FP51841 1108 aa15.35■□□□□ 0.05
PTCH1-226ENST00000553011 WNT7BP56706 349 aa15.35■□□□□ 0.05
PTCH1-226ENST00000553011 TAS1R1Q7RTX1 841 aa15.35■□□□□ 0.05
PTCH1-226ENST00000553011 TMC7Q7Z402 723 aa15.35■□□□□ 0.05
PTCH1-226ENST00000553011 ADGRD2Q7Z7M1 963 aa15.35■□□□□ 0.05
PTCH1-226ENST00000553011 SMYD4Q8IYR2 804 aaPredicted RBP15.35■□□□□ 0.05
PTCH1-226ENST00000553011 AUTS2Q8WXX7 1259 aa15.35■□□□□ 0.05
PTCH1-226ENST00000553011 ZBP1Q9H171 429 aa15.35■□□□□ 0.05
PTCH1-226ENST00000553011 SLC38A7Q9NVC3 462 aa15.35■□□□□ 0.05
PTCH1-226ENST00000553011 HSPBP1Q9NZL4 362 aa15.35■□□□□ 0.05
PTCH1-226ENST00000553011 TUBGCP4Q9UGJ1 667 aa15.35■□□□□ 0.05
PTCH1-226ENST00000553011 ADAM28Q9UKQ2 775 aa15.35■□□□□ 0.05
PTCH1-226ENST00000553011 MAPK8IP1Q9UQF2 711 aa15.35■□□□□ 0.05
PTCH1-226ENST00000553011 HIDE1A8MVS5 230 aa15.34■□□□□ 0.05
PTCH1-226ENST00000553011 EXTL3O43909 919 aa15.34■□□□□ 0.05
PTCH1-226ENST00000553011 TADA2AO75478 443 aa15.34■□□□□ 0.05
PTCH1-226ENST00000553011 EFEMP2O95967 443 aa15.34■□□□□ 0.05
PTCH1-226ENST00000553011 LDHAP00338 332 aaKnown RBP15.34■□□□□ 0.05
PTCH1-226ENST00000553011 NFICP08651 508 aa15.34■□□□□ 0.05
PTCH1-226ENST00000553011 GTF2F1P35269 517 aaKnown RBP eCLIP15.34■□□□□ 0.05
PTCH1-226ENST00000553011 SKIV2LQ15477 1246 aaKnown RBP15.34■□□□□ 0.05
PTCH1-226ENST00000553011 ZBTB6Q15916 424 aa15.34■□□□□ 0.05
PTCH1-226ENST00000553011 JADE1Q6IE81 842 aa15.34■□□□□ 0.05
PTCH1-226ENST00000553011 FUT10Q6P4F1 479 aa15.34■□□□□ 0.05
PTCH1-226ENST00000553011 ELOA2Q8IYF1 753 aaPredicted RBP15.34■□□□□ 0.05
PTCH1-226ENST00000553011 GPD1LQ8N335 351 aa15.34■□□□□ 0.05
PTCH1-226ENST00000553011 C3orf58Q8NDZ4 430 aa15.34■□□□□ 0.05
PTCH1-226ENST00000553011 SPATA20Q8TB22 786 aa15.34■□□□□ 0.05
PTCH1-226ENST00000553011 SMARCE1Q969G3 411 aa15.34■□□□□ 0.05
PTCH1-226ENST00000553011 GBP4Q96PP9 640 aa15.34■□□□□ 0.05
PTCH1-226ENST00000553011 GPR62Q9BZJ7 368 aa15.34■□□□□ 0.05
PTCH1-226ENST00000553011 LMBRD1Q9NUN5 540 aa15.34■□□□□ 0.05
PTCH1-226ENST00000553011 HOOK1Q9UJC3 728 aaKnown RBP15.34■□□□□ 0.05
PTCH1-226ENST00000553011 TULP1O00294 542 aaPredicted RBP15.33■□□□□ 0.04
PTCH1-226ENST00000553011 PODXLO00592 558 aa15.33■□□□□ 0.04
PTCH1-226ENST00000553011 KIAA0391O15091 583 aaKnown RBP15.33■□□□□ 0.04
PTCH1-226ENST00000553011 SMC2O95347 1197 aa15.33■□□□□ 0.04
PTCH1-226ENST00000553011 SOD2P04179 222 aa15.33■□□□□ 0.04
PTCH1-226ENST00000553011 CTSAP10619 480 aa15.33■□□□□ 0.04
PTCH1-226ENST00000553011 CA8P35219 290 aa15.33■□□□□ 0.04
PTCH1-226ENST00000553011 CYP2J2P51589 502 aa15.33■□□□□ 0.04
PTCH1-226ENST00000553011 HYAL1Q12794 435 aa15.33■□□□□ 0.04
PTCH1-226ENST00000553011 UPP1Q16831 310 aa15.33■□□□□ 0.04
PTCH1-226ENST00000553011 CD300LGQ6UXG3 332 aa15.33■□□□□ 0.04
PTCH1-226ENST00000553011 HS2ST1Q7LGA3 356 aa15.33■□□□□ 0.04
PTCH1-226ENST00000553011 RBM23Q86U06 439 aaKnown RBP15.33■□□□□ 0.04
PTCH1-226ENST00000553011 CBWD2Q8IUF1 395 aa15.33■□□□□ 0.04
PTCH1-226ENST00000553011 BRSK2Q8IWQ3 736 aa15.33■□□□□ 0.04
PTCH1-226ENST00000553011 CD302Q8IX05 232 aa15.33■□□□□ 0.04
PTCH1-226ENST00000553011 RNF168Q8IYW5 571 aaPredicted RBP15.33■□□□□ 0.04
PTCH1-226ENST00000553011 B3GALT6Q96L58 329 aa15.33■□□□□ 0.04
PTCH1-226ENST00000553011 UROC1Q96N76 676 aa15.33■□□□□ 0.04
PTCH1-226ENST00000553011 GSDMAQ96QA5 445 aa15.33■□□□□ 0.04
PTCH1-226ENST00000553011 HERC2P3Q9BVR0 1158 aa15.33■□□□□ 0.04
PTCH1-226ENST00000553011 KCTD10Q9H3F6 313 aa15.33■□□□□ 0.04
PTCH1-226ENST00000553011 IGFLR1Q9H665 355 aa15.33■□□□□ 0.04
PTCH1-226ENST00000553011 NGRNQ9NPE2 291 aaKnown RBP15.33■□□□□ 0.04
PTCH1-226ENST00000553011 RMND1Q9NWS8 449 aa15.33■□□□□ 0.04
PTCH1-226ENST00000553011 RBAKQ9NYW8 714 aaPredicted RBP15.33■□□□□ 0.04
PTCH1-226ENST00000553011 UBQLN1Q9UMX0 589 aaKnown RBP15.33■□□□□ 0.04
PTCH1-226ENST00000553011 PLXNA3P51805 1871 aa15.32■□□□□ 0.04
PTCH1-226ENST00000553011 C2orf71A6NGG8 1288 aa15.32■□□□□ 0.04
PTCH1-226ENST00000553011 TMEM189-UBE2V1I3L0A0 370 aa15.32■□□□□ 0.04
PTCH1-226ENST00000553011 PER2O15055 1255 aa15.32■□□□□ 0.04
PTCH1-226ENST00000553011 B3GAT3O94766 335 aa15.32■□□□□ 0.04
PTCH1-226ENST00000553011 IL18RAPO95256 599 aa15.32■□□□□ 0.04
PTCH1-226ENST00000553011 CXCL14O95715 111 aa15.32■□□□□ 0.04
PTCH1-226ENST00000553011 NRIP1P48552 1158 aa15.32■□□□□ 0.04
PTCH1-226ENST00000553011 SNRPFP62306 86 aaKnown RBP15.32■□□□□ 0.04
PTCH1-226ENST00000553011 POU5F1Q01860 360 aaKnown RBP15.32■□□□□ 0.04
PTCH1-226ENST00000553011 SMC1AQ14683 1233 aaKnown RBP15.32■□□□□ 0.04
PTCH1-226ENST00000553011 TMEM132DQ14C87 1099 aa15.32■□□□□ 0.04
PTCH1-226ENST00000553011 ISM2Q6H9L7 571 aa15.32■□□□□ 0.04
PTCH1-226ENST00000553011 PDE12Q6L8Q7 609 aaKnown RBP15.32■□□□□ 0.04
PTCH1-226ENST00000553011 DCLRE1AQ6PJP8 1040 aa15.32■□□□□ 0.04
PTCH1-226ENST00000553011 EFCAB13Q8IY85 973 aa15.32■□□□□ 0.04
PTCH1-226ENST00000553011 GUF1Q8N442 669 aaKnown RBP15.32■□□□□ 0.04
PTCH1-226ENST00000553011 RDH13Q8NBN7 331 aa15.32■□□□□ 0.04
PTCH1-226ENST00000553011 DDX27Q96GQ7 796 aaKnown RBP15.32■□□□□ 0.04
PTCH1-226ENST00000553011 FAM84AQ96KN4 292 aa15.32■□□□□ 0.04
PTCH1-226ENST00000553011 ASB7Q9H672 318 aa15.32■□□□□ 0.04
PTCH1-226ENST00000553011 CGNQ9P2M7 1197 aaKnown RBP15.32■□□□□ 0.04
PTCH1-226ENST00000553011 NCOR1O75376 2440 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms