RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 RNF168Q8IYW5 571 aaPredicted RBP12.75□□□□□ -0.37
TRAFD1-209ENST00000552896 ZMAT2Q96NC0 199 aaKnown RBP12.75□□□□□ -0.37
TRAFD1-209ENST00000552896 TCF25Q9BQ70 676 aa12.75□□□□□ -0.37
TRAFD1-209ENST00000552896 HERC2P3Q9BVR0 1158 aa12.75□□□□□ -0.37
TRAFD1-209ENST00000552896 COLEC11Q9BWP8 271 aa12.75□□□□□ -0.37
TRAFD1-209ENST00000552896 VN1R3Q9BXE9 311 aa12.75□□□□□ -0.37
TRAFD1-209ENST00000552896 ZBP1Q9H171 429 aa12.75□□□□□ -0.37
TRAFD1-209ENST00000552896 NGRNQ9NPE2 291 aaKnown RBP12.75□□□□□ -0.37
TRAFD1-209ENST00000552896 ENTPD7Q9NQZ7 604 aa12.75□□□□□ -0.37
TRAFD1-209ENST00000552896 CGNQ9P2M7 1197 aaKnown RBP12.75□□□□□ -0.37
TRAFD1-209ENST00000552896 ADAM28Q9UKQ2 775 aa12.75□□□□□ -0.37
TRAFD1-209ENST00000552896 SF3B1O75533 1304 aaKnown RBP eCLIP12.74□□□□□ -0.371e-7■■■■■ 31.2
TRAFD1-209ENST00000552896 XPOTO43592 962 aaKnown RBP12.74□□□□□ -0.37
TRAFD1-209ENST00000552896 CSPG5O95196 566 aa12.74□□□□□ -0.37
TRAFD1-209ENST00000552896 KIF20AO95235 890 aa12.74□□□□□ -0.37
TRAFD1-209ENST00000552896 KIF4AO95239 1232 aa12.74□□□□□ -0.37
TRAFD1-209ENST00000552896 IL18RAPO95256 599 aa12.74□□□□□ -0.37
TRAFD1-209ENST00000552896 EFEMP2O95967 443 aa12.74□□□□□ -0.37
TRAFD1-209ENST00000552896 LDHAP00338 332 aaKnown RBP12.74□□□□□ -0.37
TRAFD1-209ENST00000552896 SOD2P04179 222 aa12.74□□□□□ -0.37
TRAFD1-209ENST00000552896 IRS1P35568 1242 aa12.74□□□□□ -0.37
TRAFD1-209ENST00000552896 ACOT2P49753 483 aa12.74□□□□□ -0.37
TRAFD1-209ENST00000552896 SOX4Q06945 474 aaPredicted RBP12.74□□□□□ -0.37
TRAFD1-209ENST00000552896 STK4Q13043 487 aa12.74□□□□□ -0.37
TRAFD1-209ENST00000552896 PNOCQ13519 176 aa12.74□□□□□ -0.37
TRAFD1-209ENST00000552896 SMC1AQ14683 1233 aaKnown RBP12.74□□□□□ -0.37
TRAFD1-209ENST00000552896 BMS1Q14692 1282 aaKnown RBP12.74□□□□□ -0.37
TRAFD1-209ENST00000552896 COL19A1Q14993 1142 aa12.74□□□□□ -0.37
TRAFD1-209ENST00000552896 KNOP1Q1ED39 458 aaKnown RBP12.74□□□□□ -0.37
TRAFD1-209ENST00000552896 TCEAL5Q5H9L2 206 aa12.74□□□□□ -0.37
TRAFD1-209ENST00000552896 PLPP4Q5VZY2 271 aa12.74□□□□□ -0.37
TRAFD1-209ENST00000552896 HS2ST1Q7LGA3 356 aa12.74□□□□□ -0.37
TRAFD1-209ENST00000552896 BRSK2Q8IWQ3 736 aa12.74□□□□□ -0.37
TRAFD1-209ENST00000552896 C12orf56Q8IXR9 622 aa12.74□□□□□ -0.37
TRAFD1-209ENST00000552896 VPS52Q8N1B4 723 aa12.74□□□□□ -0.37
TRAFD1-209ENST00000552896 SPATA20Q8TB22 786 aa12.74□□□□□ -0.37
TRAFD1-209ENST00000552896 GOLGA5Q8TBA6 731 aa12.74□□□□□ -0.37
TRAFD1-209ENST00000552896 GBP4Q96PP9 640 aa12.74□□□□□ -0.37
TRAFD1-209ENST00000552896 GSDMAQ96QA5 445 aa12.74□□□□□ -0.37
TRAFD1-209ENST00000552896 PAAF1Q9BRP4 392 aa12.74□□□□□ -0.37
TRAFD1-209ENST00000552896 CBWD1Q9BRT8 395 aa12.74□□□□□ -0.37
TRAFD1-209ENST00000552896 ASB7Q9H672 318 aa12.74□□□□□ -0.37
TRAFD1-209ENST00000552896 AGPAT3Q9NRZ7 376 aa12.74□□□□□ -0.37
TRAFD1-209ENST00000552896 RMND1Q9NWS8 449 aa12.74□□□□□ -0.37
TRAFD1-209ENST00000552896 CACNG4Q9UBN1 327 aa12.74□□□□□ -0.37
TRAFD1-209ENST00000552896 DERAQ9Y315 318 aa12.74□□□□□ -0.37
TRAFD1-209ENST00000552896 IRAK3Q9Y616 596 aa12.74□□□□□ -0.37
TRAFD1-209ENST00000552896 SPTBN5Q9NRC6 3674 aaKnown RBP12.73□□□□□ -0.37
TRAFD1-209ENST00000552896 C2orf16Q68DN1 1984 aa12.73□□□□□ -0.37
TRAFD1-209ENST00000552896 F8W810 466 aa12.73□□□□□ -0.37
TRAFD1-209ENST00000552896 TGFB1I1O43294 461 aa12.73□□□□□ -0.37
TRAFD1-209ENST00000552896 EXTL3O43909 919 aa12.73□□□□□ -0.37
TRAFD1-209ENST00000552896 SMC2O95347 1197 aa12.73□□□□□ -0.37
TRAFD1-209ENST00000552896 CTSAP10619 480 aa12.73□□□□□ -0.37
TRAFD1-209ENST00000552896 CD44P16070 742 aaKnown RBP12.73□□□□□ -0.37
TRAFD1-209ENST00000552896 CYP3A5P20815 502 aa12.73□□□□□ -0.37
TRAFD1-209ENST00000552896 ERVFC1P60507 584 aa12.73□□□□□ -0.37
TRAFD1-209ENST00000552896 CCDC85BQ15834 202 aaPredicted RBP12.73□□□□□ -0.37
TRAFD1-209ENST00000552896 UPP1Q16831 310 aa12.73□□□□□ -0.37
TRAFD1-209ENST00000552896 FUT10Q6P4F1 479 aa12.73□□□□□ -0.37
TRAFD1-209ENST00000552896 CRELD2Q6UXH1 353 aaPredicted RBP12.73□□□□□ -0.37
TRAFD1-209ENST00000552896 TMC7Q7Z402 723 aa12.73□□□□□ -0.37
TRAFD1-209ENST00000552896 NELFCDQ8IXH7 590 aa12.73□□□□□ -0.37
TRAFD1-209ENST00000552896 GPD1LQ8N335 351 aa12.73□□□□□ -0.37
TRAFD1-209ENST00000552896 SAAL1Q96ER3 474 aa12.73□□□□□ -0.37
TRAFD1-209ENST00000552896 KIF12Q96FN5 646 aa12.73□□□□□ -0.37
TRAFD1-209ENST00000552896 DDX27Q96GQ7 796 aaKnown RBP12.73□□□□□ -0.37
TRAFD1-209ENST00000552896 CDCA3Q99618 268 aaPredicted RBP12.73□□□□□ -0.37
TRAFD1-209ENST00000552896 FAM213AQ9BRX8 229 aa12.73□□□□□ -0.37
TRAFD1-209ENST00000552896 GTPBP4Q9BZE4 634 aaKnown RBP12.73□□□□□ -0.37
TRAFD1-209ENST00000552896 GOLGA2P5Q9HBQ8 144 aa12.73□□□□□ -0.37
TRAFD1-209ENST00000552896 HSPBP1Q9NZL4 362 aa12.73□□□□□ -0.37
TRAFD1-209ENST00000552896 TUBGCP4Q9UGJ1 667 aa12.73□□□□□ -0.37
TRAFD1-209ENST00000552896 UBQLN1Q9UMX0 589 aaKnown RBP12.73□□□□□ -0.37
TRAFD1-209ENST00000552896 C2CD2Q9Y426 696 aa12.73□□□□□ -0.37
TRAFD1-209ENST00000552896 PCDHGC5Q9Y5F6 944 aa12.73□□□□□ -0.37
TRAFD1-209ENST00000552896 DENND4AQ7Z401 1863 aa12.73□□□□□ -0.37
TRAFD1-209ENST00000552896 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.72□□□□□ -0.37
TRAFD1-209ENST00000552896 LACTBL1A8MY62 500 aa12.72□□□□□ -0.37
TRAFD1-209ENST00000552896 PODXLO00592 558 aa12.72□□□□□ -0.37
TRAFD1-209ENST00000552896 NCK2O43639 380 aa12.72□□□□□ -0.37
TRAFD1-209ENST00000552896 PRPF40AO75400 957 aaKnown RBP12.72□□□□□ -0.37
TRAFD1-209ENST00000552896 URODP06132 367 aa12.72□□□□□ -0.37
TRAFD1-209ENST00000552896 NFICP08651 508 aa12.72□□□□□ -0.37
TRAFD1-209ENST00000552896 RPL9P32969 192 aaKnown RBP12.72□□□□□ -0.37
TRAFD1-209ENST00000552896 GLUD2P49448 558 aa12.72□□□□□ -0.37
TRAFD1-209ENST00000552896 CLCNKBP51801 687 aa12.72□□□□□ -0.37
TRAFD1-209ENST00000552896 HYAL1Q12794 435 aa12.72□□□□□ -0.37
TRAFD1-209ENST00000552896 ELAVL2Q12926 359 aaKnown RBP12.72□□□□□ -0.37
TRAFD1-209ENST00000552896 TMEM132DQ14C87 1099 aa12.72□□□□□ -0.37
TRAFD1-209ENST00000552896 PTPN14Q15678 1187 aa12.72□□□□□ -0.37
TRAFD1-209ENST00000552896 ZBTB6Q15916 424 aa12.72□□□□□ -0.37
TRAFD1-209ENST00000552896 JADE1Q6IE81 842 aa12.72□□□□□ -0.37
TRAFD1-209ENST00000552896 ADGRD2Q7Z7M1 963 aa12.72□□□□□ -0.37
TRAFD1-209ENST00000552896 NT5DC4Q86YG4 428 aa12.72□□□□□ -0.37
TRAFD1-209ENST00000552896 GPR65Q8IYL9 337 aa12.72□□□□□ -0.37
TRAFD1-209ENST00000552896 TMEM174Q8WUU8 243 aa12.72□□□□□ -0.37
TRAFD1-209ENST00000552896 PPM1EQ8WY54 764 aa12.72□□□□□ -0.37
TRAFD1-209ENST00000552896 SMARCE1Q969G3 411 aa12.72□□□□□ -0.37
TRAFD1-209ENST00000552896 C18orf25Q96B23 403 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms