RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 BMPR1AP36894 532 aa10.81□□□□□ -0.68
LETMD1-234ENST00000552645 ALDH7A1P49419 539 aaKnown RBP10.81□□□□□ -0.68
LETMD1-234ENST00000552645 HNRNPH2P55795 449 aaKnown RBP10.81□□□□□ -0.68
LETMD1-234ENST00000552645 BCAR1P56945 870 aa10.81□□□□□ -0.68
LETMD1-234ENST00000552645 SPAG1Q07617 926 aa10.81□□□□□ -0.68
LETMD1-234ENST00000552645 TEX35Q5T0J7 233 aa10.81□□□□□ -0.68
LETMD1-234ENST00000552645 GPR153Q6NV75 609 aa10.81□□□□□ -0.68
LETMD1-234ENST00000552645 COLGALT1Q8NBJ5 622 aa10.81□□□□□ -0.68
LETMD1-234ENST00000552645 ZNF507Q8TCN5 953 aa10.81□□□□□ -0.68
LETMD1-234ENST00000552645 RABGGTAQ92696 567 aa10.81□□□□□ -0.68
LETMD1-234ENST00000552645 KCNN1Q92952 543 aa10.81□□□□□ -0.68
LETMD1-234ENST00000552645 CLP1Q92989 425 aaKnown RBP10.81□□□□□ -0.68
LETMD1-234ENST00000552645 ZNF558Q96NG5 402 aa10.81□□□□□ -0.68
LETMD1-234ENST00000552645 CBWD1Q9BRT8 395 aa10.81□□□□□ -0.68
LETMD1-234ENST00000552645 FAM213AQ9BRX8 229 aa10.81□□□□□ -0.68
LETMD1-234ENST00000552645 NRDE2Q9H7Z3 1164 aa10.81□□□□□ -0.68
LETMD1-234ENST00000552645 RMND1Q9NWS8 449 aa10.81□□□□□ -0.68
LETMD1-234ENST00000552645 CACNG4Q9UBN1 327 aa10.81□□□□□ -0.68
LETMD1-234ENST00000552645 PLAGL2Q9UPG8 496 aa10.81□□□□□ -0.68
LETMD1-234ENST00000552645 RWDD3Q9Y3V2 267 aa10.81□□□□□ -0.68
LETMD1-234ENST00000552645 ZMYM2Q9UBW7 1377 aa10.81□□□□□ -0.68
LETMD1-234ENST00000552645 ANK1P16157 1881 aa10.81□□□□□ -0.68
LETMD1-234ENST00000552645 MYO7AQ13402 2215 aa10.81□□□□□ -0.68
LETMD1-234ENST00000552645 ERICH4A6NGS2 130 aa10.8□□□□□ -0.68
LETMD1-234ENST00000552645 CLIC2O15247 247 aa10.8□□□□□ -0.68
LETMD1-234ENST00000552645 DDHD2O94830 711 aa10.8□□□□□ -0.68
LETMD1-234ENST00000552645 UBE4BO95155 1302 aa10.8□□□□□ -0.68
LETMD1-234ENST00000552645 SLU7O95391 586 aaKnown RBP10.8□□□□□ -0.68
LETMD1-234ENST00000552645 CAVIN2O95810 425 aa10.8□□□□□ -0.68
LETMD1-234ENST00000552645 THP07101 528 aa10.8□□□□□ -0.68
LETMD1-234ENST00000552645 CLTAP09496 248 aa10.8□□□□□ -0.68
LETMD1-234ENST00000552645 ADSSP30520 456 aa10.8□□□□□ -0.68
LETMD1-234ENST00000552645 OR1G1P47890 313 aa10.8□□□□□ -0.68
LETMD1-234ENST00000552645 CYP2J2P51589 502 aa10.8□□□□□ -0.68
LETMD1-234ENST00000552645 ZNF75DP51815 510 aa10.8□□□□□ -0.68
LETMD1-234ENST00000552645 GPM6BQ13491 265 aa10.8□□□□□ -0.68
LETMD1-234ENST00000552645 KCNB1Q14721 858 aa10.8□□□□□ -0.68
LETMD1-234ENST00000552645 KNOP1Q1ED39 458 aaKnown RBP10.8□□□□□ -0.68
LETMD1-234ENST00000552645 KCNT2Q6UVM3 1135 aa10.8□□□□□ -0.68
LETMD1-234ENST00000552645 HS2ST1Q7LGA3 356 aa10.8□□□□□ -0.68
LETMD1-234ENST00000552645 CCDC186Q7Z3E2 898 aa10.8□□□□□ -0.68
LETMD1-234ENST00000552645 MICALL1Q8N3F8 863 aa10.8□□□□□ -0.68
LETMD1-234ENST00000552645 KLHL23Q8NBE8 558 aa10.8□□□□□ -0.68
LETMD1-234ENST00000552645 SPC24Q8NBT2 197 aa10.8□□□□□ -0.68
LETMD1-234ENST00000552645 MYLIPQ8WY64 445 aa10.8□□□□□ -0.68
LETMD1-234ENST00000552645 SAMD11Q96NU1 681 aa10.8□□□□□ -0.68
LETMD1-234ENST00000552645 GSDMAQ96QA5 445 aa10.8□□□□□ -0.68
LETMD1-234ENST00000552645 GAS2L1Q99501 681 aaPredicted RBP10.8□□□□□ -0.68
LETMD1-234ENST00000552645 CDX2Q99626 313 aaPredicted RBP10.8□□□□□ -0.68
LETMD1-234ENST00000552645 RASSF4Q9H2L5 321 aa10.8□□□□□ -0.68
LETMD1-234ENST00000552645 RPF1Q9H9Y2 349 aaKnown RBP10.8□□□□□ -0.68
LETMD1-234ENST00000552645 ALG13Q9NP73 1137 aaKnown RBP10.8□□□□□ -0.68
LETMD1-234ENST00000552645 PRG3Q9Y2Y8 225 aaPredicted RBP10.8□□□□□ -0.68
LETMD1-234ENST00000552645 CASTOR2A6NHX0 329 aa10.8□□□□□ -0.68
LETMD1-234ENST00000552645 PTGESO14684 152 aa10.8□□□□□ -0.68
LETMD1-234ENST00000552645 ATP8B1O43520 1251 aa10.8□□□□□ -0.68
LETMD1-234ENST00000552645 B4GALT3O60512 393 aa10.8□□□□□ -0.68
LETMD1-234ENST00000552645 LINC00271P0C7V0 271 aa10.8□□□□□ -0.68
LETMD1-234ENST00000552645 SLC11A1P49279 550 aa10.8□□□□□ -0.68
LETMD1-234ENST00000552645 TPM4P67936 248 aa10.8□□□□□ -0.68
LETMD1-234ENST00000552645 PPP2R3AQ06190 1150 aa10.8□□□□□ -0.68
LETMD1-234ENST00000552645 GRIK3Q13003 919 aa10.8□□□□□ -0.68
LETMD1-234ENST00000552645 ENOX2Q16206 610 aaKnown RBP10.8□□□□□ -0.68
LETMD1-234ENST00000552645 TPD52L1Q16890 204 aaPredicted RBP10.8□□□□□ -0.68
LETMD1-234ENST00000552645 SLC10A6Q3KNW5 377 aa10.8□□□□□ -0.68
LETMD1-234ENST00000552645 RDH13Q8NBN7 331 aa10.8□□□□□ -0.68
LETMD1-234ENST00000552645 GSTCDQ8NEC7 633 aa10.8□□□□□ -0.68
LETMD1-234ENST00000552645 ZSWIM2Q8NEG5 633 aa10.8□□□□□ -0.68
LETMD1-234ENST00000552645 SNX27Q96L92 541 aa10.8□□□□□ -0.68
LETMD1-234ENST00000552645 C11orf84Q9BUA3 381 aaPredicted RBP10.8□□□□□ -0.68
LETMD1-234ENST00000552645 AGPAT3Q9NRZ7 376 aa10.8□□□□□ -0.68
LETMD1-234ENST00000552645 MTMR10Q9NXD2 777 aa10.8□□□□□ -0.68
LETMD1-234ENST00000552645 PRRC2BQ5JSZ5 2229 aaKnown RBP10.8□□□□□ -0.68
LETMD1-234ENST00000552645 SMIM28A0A1B0GU29 152 aa10.79□□□□□ -0.68
LETMD1-234ENST00000552645 LACTBL1A8MY62 500 aa10.79□□□□□ -0.68
LETMD1-234ENST00000552645 TGFB1I1O43294 461 aa10.79□□□□□ -0.68
LETMD1-234ENST00000552645 FAM189A1O60320 539 aa10.79□□□□□ -0.68
LETMD1-234ENST00000552645 FGF18O76093 207 aa10.79□□□□□ -0.68
LETMD1-234ENST00000552645 TUBB4AP04350 444 aa10.79□□□□□ -0.68
LETMD1-234ENST00000552645 ALDH2P05091 517 aa10.79□□□□□ -0.68
LETMD1-234ENST00000552645 FOSL2P15408 326 aa10.79□□□□□ -0.68
LETMD1-234ENST00000552645 GARTP22102 1010 aa10.79□□□□□ -0.68
LETMD1-234ENST00000552645 CA8P35219 290 aa10.79□□□□□ -0.68
LETMD1-234ENST00000552645 KYAT1Q16773 422 aa10.79□□□□□ -0.68
LETMD1-234ENST00000552645 BMT2Q1RMZ1 405 aa10.79□□□□□ -0.68
LETMD1-234ENST00000552645 ZNF658Q5TYW1 1059 aaPredicted RBP10.79□□□□□ -0.68
LETMD1-234ENST00000552645 RBM43Q6ZSC3 357 aaKnown RBP10.79□□□□□ -0.68
LETMD1-234ENST00000552645 RSPH1Q8WYR4 309 aa10.79□□□□□ -0.68
LETMD1-234ENST00000552645 KIF12Q96FN5 646 aa10.79□□□□□ -0.68
LETMD1-234ENST00000552645 GUCD1Q96NT3 240 aa10.79□□□□□ -0.68
LETMD1-234ENST00000552645 NUP62CLQ9H1M0 184 aa10.79□□□□□ -0.68
LETMD1-234ENST00000552645 CLSTN2Q9H4D0 955 aa10.79□□□□□ -0.68
LETMD1-234ENST00000552645 GOLGA2P5Q9HBQ8 144 aa10.79□□□□□ -0.68
LETMD1-234ENST00000552645 SPG21Q9NZD8 308 aa10.79□□□□□ -0.68
LETMD1-234ENST00000552645 HSPBP1Q9NZL4 362 aa10.79□□□□□ -0.68
LETMD1-234ENST00000552645 CPSF3Q9UKF6 684 aaKnown RBP10.79□□□□□ -0.68
LETMD1-234ENST00000552645 MAN1B1Q9UKM7 699 aa10.79□□□□□ -0.68
LETMD1-234ENST00000552645 FAN1Q9Y2M0 1017 aa10.79□□□□□ -0.68
LETMD1-234ENST00000552645 STYXL1Q9Y6J8 313 aa10.79□□□□□ -0.68
LETMD1-234ENST00000552645 V9GYY5 206 aaPredicted RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms