RNA–Protein interactions for RNA: ENST00000551931.5

LETMD1-231, Transcript of LETM1 domain containing 1, human

TSL 3

Gene LETMD1, Length 705 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LETMD1-231	ENST00000551931	MTSS1L	Q765P7	747 aa		13.86	□□□□□ -0.19
LETMD1-231	ENST00000551931	KIAA2013	Q8IYS2	634 aa		13.86	□□□□□ -0.19
LETMD1-231	ENST00000551931	C3orf58	Q8NDZ4	430 aa		13.86	□□□□□ -0.19
LETMD1-231	ENST00000551931	ING5	Q8WYH8	240 aa		13.86	□□□□□ -0.19
LETMD1-231	ENST00000551931	RMDN1	Q96DB5	314 aa		13.86	□□□□□ -0.19
LETMD1-231	ENST00000551931	SHD	Q96IW2	340 aa		13.86	□□□□□ -0.19
LETMD1-231	ENST00000551931	KXD1	Q9BQD3	176 aa		13.86	□□□□□ -0.19
LETMD1-231	ENST00000551931	MTF2	Q9Y483	593 aa	Predicted RBP	13.86	□□□□□ -0.19
LETMD1-231	ENST00000551931	CDY1	Q9Y6F8	540 aa		13.86	□□□□□ -0.19
LETMD1-231	ENST00000551931	KANSL1L	A0AUZ9	987 aa		13.85	□□□□□ -0.19
LETMD1-231	ENST00000551931	B3GAT3	O94766	335 aa		13.85	□□□□□ -0.19
LETMD1-231	ENST00000551931	POU2F2	P09086	479 aa		13.85	□□□□□ -0.19
LETMD1-231	ENST00000551931	OR52Z1	P0C646	297 aa		13.85	□□□□□ -0.19
LETMD1-231	ENST00000551931	RBM25	P49756	843 aa	Known RBP	13.85	□□□□□ -0.19
LETMD1-231	ENST00000551931	ZNF174	Q15697	407 aa		13.85	□□□□□ -0.19
LETMD1-231	ENST00000551931	UPP1	Q16831	310 aa		13.85	□□□□□ -0.19
LETMD1-231	ENST00000551931	DCAF4L1	Q3SXM0	396 aa		13.85	□□□□□ -0.19
LETMD1-231	ENST00000551931	PABPC1L	Q4VXU2	614 aa	Known RBP	13.85	□□□□□ -0.19
LETMD1-231	ENST00000551931	ATF7IP2	Q5U623	682 aa		13.85	□□□□□ -0.19
LETMD1-231	ENST00000551931	ZC3H14	Q6PJT7	736 aa	Known RBP	13.85	□□□□□ -0.19
LETMD1-231	ENST00000551931	POTEH	Q6S545	545 aa		13.85	□□□□□ -0.19
LETMD1-231	ENST00000551931	CEP120	Q8N960	986 aa		13.85	□□□□□ -0.19
LETMD1-231	ENST00000551931	DDX27	Q96GQ7	796 aa	Known RBP	13.85	□□□□□ -0.19
LETMD1-231	ENST00000551931	CD72	P21854	359 aa		13.84	□□□□□ -0.19
LETMD1-231	ENST00000551931	BRCC3	P46736	316 aa		13.84	□□□□□ -0.19
LETMD1-231	ENST00000551931	NEK4	P51957	841 aa		13.84	□□□□□ -0.19
LETMD1-231	ENST00000551931	PRKCQ	Q04759	706 aa		13.84	□□□□□ -0.19
LETMD1-231	ENST00000551931	SOX4	Q06945	474 aa	Predicted RBP	13.84	□□□□□ -0.19
LETMD1-231	ENST00000551931	UBXN2B	Q14CS0	331 aa		13.84	□□□□□ -0.19
LETMD1-231	ENST00000551931	PPP2R5A	Q15172	486 aa		13.84	□□□□□ -0.19
LETMD1-231	ENST00000551931	SLC5A9	Q2M3M2	681 aa		13.84	□□□□□ -0.19
LETMD1-231	ENST00000551931	UVSSA	Q2YD98	709 aa		13.84	□□□□□ -0.19
LETMD1-231	ENST00000551931	SLC44A4	Q53GD3	710 aa		13.84	□□□□□ -0.19
LETMD1-231	ENST00000551931	DCLK2	Q8N568	766 aa		13.84	□□□□□ -0.19
LETMD1-231	ENST00000551931	ERMN	Q8TAM6	284 aa		13.84	□□□□□ -0.19
LETMD1-231	ENST00000551931	BHMT2	Q9H2M3	363 aa		13.84	□□□□□ -0.19
LETMD1-231	ENST00000551931	RALGAPA1	Q6GYQ0	2036 aa		13.84	□□□□□ -0.19
LETMD1-231	ENST00000551931	KIF26A	Q9ULI4	1882 aa	Predicted RBP	13.84	□□□□□ -0.19
LETMD1-231	ENST00000551931	EFNA5	P52803	228 aa		13.83	□□□□□ -0.2
LETMD1-231	ENST00000551931	SAFB	Q15424	915 aa	Known RBP eCLIP	13.83	□□□□□ -0.2
LETMD1-231	ENST00000551931	SUMF1	Q8NBK3	374 aa		13.83	□□□□□ -0.2
LETMD1-231	ENST00000551931	MCRS1	Q96EZ8	462 aa		13.83	□□□□□ -0.2
LETMD1-231	ENST00000551931	IFT74	Q96LB3	600 aa		13.83	□□□□□ -0.2
LETMD1-231	ENST00000551931	HINFP	Q9BQA5	517 aa		13.83	□□□□□ -0.2
LETMD1-231	ENST00000551931	BCO2	Q9BYV7	579 aa		13.83	□□□□□ -0.2
LETMD1-231	ENST00000551931	PLA2G2F	Q9BZM2	168 aa		13.83	□□□□□ -0.2
LETMD1-231	ENST00000551931	LTB4R2	Q9NPC1	389 aa		13.83	□□□□□ -0.2
LETMD1-231	ENST00000551931	SPATA6	Q9NWH7	488 aa	Predicted RBP	13.83	□□□□□ -0.2
LETMD1-231	ENST00000551931	KCNH3	Q9ULD8	1083 aa		13.83	□□□□□ -0.2
LETMD1-231	ENST00000551931	MRPS23	Q9Y3D9	190 aa	Known RBP	13.83	□□□□□ -0.2
LETMD1-231	ENST00000551931	BACE2	Q9Y5Z0	518 aa		13.83	□□□□□ -0.2
LETMD1-231	ENST00000551931	SMIM28	A0A1B0GU29	152 aa		13.82	□□□□□ -0.2
LETMD1-231	ENST00000551931	MED19	A0JLT2	244 aa	Predicted RBP	13.82	□□□□□ -0.2
LETMD1-231	ENST00000551931	FAM170B	A6NMN3	283 aa		13.82	□□□□□ -0.2
LETMD1-231	ENST00000551931	RHO	P08100	348 aa		13.82	□□□□□ -0.2
LETMD1-231	ENST00000551931	CEBPB	P17676	345 aa		13.82	□□□□□ -0.2
LETMD1-231	ENST00000551931	MUT	P22033	750 aa		13.82	□□□□□ -0.2
LETMD1-231	ENST00000551931	CCT6A	P40227	531 aa	Known RBP	13.82	□□□□□ -0.2
LETMD1-231	ENST00000551931	OSTN	P61366	133 aa		13.82	□□□□□ -0.2
LETMD1-231	ENST00000551931	PFKP	Q01813	784 aa		13.82	□□□□□ -0.2
LETMD1-231	ENST00000551931	ROR1	Q01973	937 aa		13.82	□□□□□ -0.2
LETMD1-231	ENST00000551931	ORC2	Q13416	577 aa	Predicted RBP	13.82	□□□□□ -0.2
LETMD1-231	ENST00000551931	NBR1	Q14596	966 aa		13.82	□□□□□ -0.2
LETMD1-231	ENST00000551931	TTC38	Q5R3I4	469 aa		13.82	□□□□□ -0.2
LETMD1-231	ENST00000551931	HAUS3	Q68CZ6	603 aa		13.82	□□□□□ -0.2
LETMD1-231	ENST00000551931	ANKS3	Q6ZW76	656 aa		13.82	□□□□□ -0.2
LETMD1-231	ENST00000551931	RUBCN	Q92622	972 aa		13.82	□□□□□ -0.2
LETMD1-231	ENST00000551931	KIFAP3	Q92845	792 aa		13.82	□□□□□ -0.2
LETMD1-231	ENST00000551931	C8orf76	Q96K31	380 aa		13.82	□□□□□ -0.2
LETMD1-231	ENST00000551931	UROC1	Q96N76	676 aa		13.82	□□□□□ -0.2
LETMD1-231	ENST00000551931	ZMAT2	Q96NC0	199 aa	Known RBP	13.82	□□□□□ -0.2
LETMD1-231	ENST00000551931	CDT1	Q9H211	546 aa		13.82	□□□□□ -0.2
LETMD1-231	ENST00000551931	TNFSF13B	Q9Y275	285 aa		13.82	□□□□□ -0.2
LETMD1-231	ENST00000551931	TPR	P12270	2363 aa	Known RBP	13.81	□□□□□ -0.2
LETMD1-231	ENST00000551931	TSC2	P49815	1807 aa		13.81	□□□□□ -0.2
LETMD1-231	ENST00000551931	NUP210	Q8TEM1	1887 aa	Predicted RBP	13.81	□□□□□ -0.2
LETMD1-231	ENST00000551931	WDR27	A2RRH5	827 aa		13.81	□□□□□ -0.2
LETMD1-231	ENST00000551931	SHISA7	A6NL88	538 aa		13.81	□□□□□ -0.2
LETMD1-231	ENST00000551931		K7ERI5	159 aa		13.81	□□□□□ -0.2
LETMD1-231	ENST00000551931	NRG2	O14511	850 aa	Predicted RBP	13.81	□□□□□ -0.2
LETMD1-231	ENST00000551931	LAMTOR5	O43504	91 aa		13.81	□□□□□ -0.2
LETMD1-231	ENST00000551931	KIN	O60870	393 aa	Known RBP	13.81	□□□□□ -0.2
LETMD1-231	ENST00000551931	ECI2	O75521	394 aa		13.81	□□□□□ -0.2
LETMD1-231	ENST00000551931	TARS	P26639	723 aa	Known RBP	13.81	□□□□□ -0.2
LETMD1-231	ENST00000551931	GRM5	P41594	1212 aa		13.81	□□□□□ -0.2
LETMD1-231	ENST00000551931	FXR2	P51116	673 aa	Known RBP eCLIP	13.81	□□□□□ -0.2
LETMD1-231	ENST00000551931	ZNF568	Q3ZCX4	644 aa		13.81	□□□□□ -0.2
LETMD1-231	ENST00000551931	XKR4	Q5GH76	650 aa		13.81	□□□□□ -0.2
LETMD1-231	ENST00000551931	VARS2	Q5ST30	1063 aa	Known RBP	13.81	□□□□□ -0.2
LETMD1-231	ENST00000551931	TANGO2	Q6ICL3	276 aa		13.81	□□□□□ -0.2
LETMD1-231	ENST00000551931	SLC8B1	Q6J4K2	584 aa		13.81	□□□□□ -0.2
LETMD1-231	ENST00000551931	ALKAL1	Q6UXT8	129 aa		13.81	□□□□□ -0.2
LETMD1-231	ENST00000551931	TPRG1	Q6ZUI0	275 aa		13.81	□□□□□ -0.2
LETMD1-231	ENST00000551931	RTL10	Q7L3V2	364 aa		13.81	□□□□□ -0.2
LETMD1-231	ENST00000551931	TAS1R3	Q7RTX0	852 aa		13.81	□□□□□ -0.2
LETMD1-231	ENST00000551931	CCDC83	Q8IWF9	413 aa		13.81	□□□□□ -0.2
LETMD1-231	ENST00000551931	DAW1	Q8N136	415 aa		13.81	□□□□□ -0.2
LETMD1-231	ENST00000551931	C4orf32	Q8N8J7	132 aa		13.81	□□□□□ -0.2
LETMD1-231	ENST00000551931	ZNF461	Q8TAF7	563 aa		13.81	□□□□□ -0.2
LETMD1-231	ENST00000551931	ACO2	Q99798	780 aa	Known RBP	13.81	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms