RNA–Protein interactions for RNA: ENST00000551305.5

TMEM106C-216, Transcript of transmembrane protein 106C, humanhuman

TSL 1 (best)

Gene TMEM106C, Length 1,356 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-216ENST00000551305 DDX27Q96GQ7 796 aaKnown RBP16.3■□□□□ 0.2
TMEM106C-216ENST00000551305 SPATA6Q9NWH7 488 aaPredicted RBP16.3■□□□□ 0.2
TMEM106C-216ENST00000551305 NOTCH4Q99466 2003 aa16.3■□□□□ 0.2
TMEM106C-216ENST00000551305 GVINP1Q7Z2Y8 2422 aa16.3■□□□□ 0.2
TMEM106C-216ENST00000551305 TMEM189-UBE2V1I3L0A0 370 aa16.29■□□□□ 0.2
TMEM106C-216ENST00000551305 NEK4P51957 841 aa16.29■□□□□ 0.2
TMEM106C-216ENST00000551305 SOX4Q06945 474 aaPredicted RBP16.29■□□□□ 0.2
TMEM106C-216ENST00000551305 SLC5A9Q2M3M2 681 aa16.29■□□□□ 0.2
TMEM106C-216ENST00000551305 DCAF4L1Q3SXM0 396 aa16.29■□□□□ 0.2
TMEM106C-216ENST00000551305 CEP120Q8N960 986 aa16.29■□□□□ 0.2
TMEM106C-216ENST00000551305 BCO2Q9BYV7 579 aa16.29■□□□□ 0.2
TMEM106C-216ENST00000551305 MRPS23Q9Y3D9 190 aaKnown RBP16.29■□□□□ 0.2
TMEM106C-216ENST00000551305 BACE2Q9Y5Z0 518 aa16.29■□□□□ 0.2
TMEM106C-216ENST00000551305 CACNA1IQ9P0X4 2223 aa16.29■□□□□ 0.2
TMEM106C-216ENST00000551305 SMIM28A0A1B0GU29 152 aa16.28■□□□□ 0.2
TMEM106C-216ENST00000551305 MED19A0JLT2 244 aaPredicted RBP16.28■□□□□ 0.2
TMEM106C-216ENST00000551305 RHOP08100 348 aa16.28■□□□□ 0.2
TMEM106C-216ENST00000551305 POU2F2P09086 479 aa16.28■□□□□ 0.2
TMEM106C-216ENST00000551305 RBM25P49756 843 aaKnown RBP16.28■□□□□ 0.2
TMEM106C-216ENST00000551305 OSTNP61366 133 aa16.28■□□□□ 0.2
TMEM106C-216ENST00000551305 PRKCQQ04759 706 aa16.28■□□□□ 0.2
TMEM106C-216ENST00000551305 CSTF1Q05048 431 aaKnown RBP16.28■□□□□ 0.2
TMEM106C-216ENST00000551305 PPP2R5AQ15172 486 aa16.28■□□□□ 0.2
TMEM106C-216ENST00000551305 SAFBQ15424 915 aaKnown RBP eCLIP16.28■□□□□ 0.2
TMEM106C-216ENST00000551305 SUMF1Q8NBK3 374 aa16.28■□□□□ 0.2
TMEM106C-216ENST00000551305 IFT74Q96LB3 600 aa16.28■□□□□ 0.2
TMEM106C-216ENST00000551305 BHMT2Q9H2M3 363 aa16.28■□□□□ 0.2
TMEM106C-216ENST00000551305 LTB4R2Q9NPC1 389 aa16.28■□□□□ 0.2
TMEM106C-216ENST00000551305 KCNH3Q9ULD8 1083 aa16.28■□□□□ 0.2
TMEM106C-216ENST00000551305 EP300Q09472 2414 aaPredicted RBP16.28■□□□□ 0.2
TMEM106C-216ENST00000551305 K7ERI5 159 aa16.27■□□□□ 0.2
TMEM106C-216ENST00000551305 LAMTOR5O43504 91 aa16.27■□□□□ 0.2
TMEM106C-216ENST00000551305 CCT6AP40227 531 aaKnown RBP16.27■□□□□ 0.2
TMEM106C-216ENST00000551305 ARPP19P56211 112 aa16.27■□□□□ 0.2
TMEM106C-216ENST00000551305 PFKPQ01813 784 aa16.27■□□□□ 0.2
TMEM106C-216ENST00000551305 NBR1Q14596 966 aa16.27■□□□□ 0.2
TMEM106C-216ENST00000551305 TANGO2Q6ICL3 276 aa16.27■□□□□ 0.2
TMEM106C-216ENST00000551305 TPRG1Q6ZUI0 275 aa16.27■□□□□ 0.2
TMEM106C-216ENST00000551305 ANKS3Q6ZW76 656 aa16.27■□□□□ 0.2
TMEM106C-216ENST00000551305 RUBCNQ92622 972 aa16.27■□□□□ 0.2
TMEM106C-216ENST00000551305 KIAA1024Q9UPX6 916 aa16.27■□□□□ 0.2
TMEM106C-216ENST00000551305 TNFSF13BQ9Y275 285 aa16.27■□□□□ 0.2
TMEM106C-216ENST00000551305 NRG2O14511 850 aaPredicted RBP16.26■□□□□ 0.19
TMEM106C-216ENST00000551305 KINO60870 393 aaKnown RBP16.26■□□□□ 0.19
TMEM106C-216ENST00000551305 CEBPBP17676 345 aa16.26■□□□□ 0.19
TMEM106C-216ENST00000551305 TARSP26639 723 aaKnown RBP16.26■□□□□ 0.19
TMEM106C-216ENST00000551305 EFNA5P52803 228 aa16.26■□□□□ 0.19
TMEM106C-216ENST00000551305 ROR1Q01973 937 aa16.26■□□□□ 0.19
TMEM106C-216ENST00000551305 TTC38Q5R3I4 469 aa16.26■□□□□ 0.19
TMEM106C-216ENST00000551305 TSSK4Q6SA08 328 aa16.26■□□□□ 0.19
TMEM106C-216ENST00000551305 ALKAL1Q6UXT8 129 aa16.26■□□□□ 0.19
TMEM106C-216ENST00000551305 DGLUCYQ7Z3D6 616 aa16.26■□□□□ 0.19
TMEM106C-216ENST00000551305 C4orf32Q8N8J7 132 aa16.26■□□□□ 0.19
TMEM106C-216ENST00000551305 C8orf76Q96K31 380 aa16.26■□□□□ 0.19
TMEM106C-216ENST00000551305 UROC1Q96N76 676 aa16.26■□□□□ 0.19
TMEM106C-216ENST00000551305 ZMAT2Q96NC0 199 aaKnown RBP16.26■□□□□ 0.19
TMEM106C-216ENST00000551305 CDT1Q9H211 546 aa16.26■□□□□ 0.19
TMEM106C-216ENST00000551305 HEBP1Q9NRV9 189 aa16.26■□□□□ 0.19
TMEM106C-216ENST00000551305 WDR27A2RRH5 827 aa16.26■□□□□ 0.19
TMEM106C-216ENST00000551305 SHISA7A6NL88 538 aa16.26■□□□□ 0.19
TMEM106C-216ENST00000551305 CCDC169A6NNP5 214 aa16.26■□□□□ 0.19
TMEM106C-216ENST00000551305 TRAPPC3O43617 180 aa16.26■□□□□ 0.19
TMEM106C-216ENST00000551305 ECI2O75521 394 aa16.26■□□□□ 0.19
TMEM106C-216ENST00000551305 SEC24AO95486 1093 aa16.26■□□□□ 0.19
TMEM106C-216ENST00000551305 PTPN2P17706 415 aa16.26■□□□□ 0.19
TMEM106C-216ENST00000551305 GRM5P41594 1212 aa16.26■□□□□ 0.19
TMEM106C-216ENST00000551305 PEX3P56589 373 aa16.26■□□□□ 0.19
TMEM106C-216ENST00000551305 XKR4Q5GH76 650 aa16.26■□□□□ 0.19
TMEM106C-216ENST00000551305 VARS2Q5ST30 1063 aaKnown RBP16.26■□□□□ 0.19
TMEM106C-216ENST00000551305 ZBTB41Q5SVQ8 909 aa16.26■□□□□ 0.19
TMEM106C-216ENST00000551305 CCDC83Q8IWF9 413 aa16.26■□□□□ 0.19
TMEM106C-216ENST00000551305 ZNF461Q8TAF7 563 aa16.26■□□□□ 0.19
TMEM106C-216ENST00000551305 KIFAP3Q92845 792 aa16.26■□□□□ 0.19
TMEM106C-216ENST00000551305 TCEAL4Q96EI5 215 aa16.26■□□□□ 0.19
TMEM106C-216ENST00000551305 ACO2Q99798 780 aaKnown RBP16.26■□□□□ 0.19
TMEM106C-216ENST00000551305 CORO1BQ9BR76 489 aa16.26■□□□□ 0.19
TMEM106C-216ENST00000551305 OSBPL6Q9BZF3 934 aa16.26■□□□□ 0.19
TMEM106C-216ENST00000551305 PTPRHQ9HD43 1115 aa16.26■□□□□ 0.19
TMEM106C-216ENST00000551305 DDX19AQ9NUU7 478 aaKnown RBP16.26■□□□□ 0.19
TMEM106C-216ENST00000551305 FBXO4Q9UKT5 387 aa16.26■□□□□ 0.19
TMEM106C-216ENST00000551305 FANCMQ8IYD8 2048 aa16.25■□□□□ 0.19
TMEM106C-216ENST00000551305 TRIP11Q15643 1979 aa16.25■□□□□ 0.19
TMEM106C-216ENST00000551305 MIA3Q5JRA6 1907 aa16.25■□□□□ 0.19
TMEM106C-216ENST00000551305 ARHGEF37A1IGU5 675 aa16.25■□□□□ 0.19
TMEM106C-216ENST00000551305 E9PMD0 336 aa16.25■□□□□ 0.19
TMEM106C-216ENST00000551305 PODXLO00592 558 aa16.25■□□□□ 0.19
TMEM106C-216ENST00000551305 MEFVO15553 781 aaPredicted RBP16.25■□□□□ 0.19
TMEM106C-216ENST00000551305 TBC1D4O60343 1298 aa16.25■□□□□ 0.19
TMEM106C-216ENST00000551305 ABLIM3O94929 683 aa16.25■□□□□ 0.19
TMEM106C-216ENST00000551305 LRG1P02750 347 aa16.25■□□□□ 0.19
TMEM106C-216ENST00000551305 ELF1P32519 619 aa16.25■□□□□ 0.19
TMEM106C-216ENST00000551305 NPTX2P47972 431 aa16.25■□□□□ 0.19
TMEM106C-216ENST00000551305 YARSP54577 528 aaKnown RBP16.25■□□□□ 0.19
TMEM106C-216ENST00000551305 FZD5Q13467 585 aa16.25■□□□□ 0.19
TMEM106C-216ENST00000551305 GRM2Q14416 872 aa16.25■□□□□ 0.19
TMEM106C-216ENST00000551305 ZNF528Q3MIS6 628 aa16.25■□□□□ 0.19
TMEM106C-216ENST00000551305 ZNF568Q3ZCX4 644 aa16.25■□□□□ 0.19
TMEM106C-216ENST00000551305 PRSS36Q5K4E3 855 aa16.25■□□□□ 0.19
TMEM106C-216ENST00000551305 HAUS3Q68CZ6 603 aa16.25■□□□□ 0.19
TMEM106C-216ENST00000551305 SLC8B1Q6J4K2 584 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms