RNA–Protein interactions for RNA: ENST00000550869.5

ERBB3-216, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 4

Gene ERBB3, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-216ENST00000550869 GPD1LQ8N335 351 aa13.16□□□□□ -0.3
ERBB3-216ENST00000550869 POMGNT1Q8WZA1 660 aa13.16□□□□□ -0.3
ERBB3-216ENST00000550869 KHSRPQ92945 711 aaKnown RBP eCLIP13.16□□□□□ -0.3
ERBB3-216ENST00000550869 CCDC51Q96ER9 411 aa13.16□□□□□ -0.3
ERBB3-216ENST00000550869 CNOT6LQ96LI5 555 aaKnown RBP13.16□□□□□ -0.3
ERBB3-216ENST00000550869 MFSD14AQ96MC6 490 aa13.16□□□□□ -0.3
ERBB3-216ENST00000550869 SCLT1Q96NL6 688 aa13.16□□□□□ -0.3
ERBB3-216ENST00000550869 PCIF1Q9H4Z3 704 aa13.16□□□□□ -0.3
ERBB3-216ENST00000550869 CHST12Q9NRB3 414 aa13.16□□□□□ -0.3
ERBB3-216ENST00000550869 RNF216Q9NWF9 866 aaPredicted RBP13.16□□□□□ -0.3
ERBB3-216ENST00000550869 AGO2Q9UKV8 859 aaKnown RBP13.16□□□□□ -0.3
ERBB3-216ENST00000550869 GINS2Q9Y248 185 aa13.16□□□□□ -0.3
ERBB3-216ENST00000550869 KIAA1671Q9BY89 1806 aa13.16□□□□□ -0.3
ERBB3-216ENST00000550869 H3BQ06 376 aaPredicted RBP13.15□□□□□ -0.3
ERBB3-216ENST00000550869 GPR182O15218 404 aa13.15□□□□□ -0.3
ERBB3-216ENST00000550869 OGTO15294 1046 aa13.15□□□□□ -0.3
ERBB3-216ENST00000550869 EXOC3O60645 756 aa13.15□□□□□ -0.3
ERBB3-216ENST00000550869 ERLIN2O94905 339 aa13.15□□□□□ -0.3
ERBB3-216ENST00000550869 ADRB2P07550 413 aa13.15□□□□□ -0.3
ERBB3-216ENST00000550869 MCF2P10911 925 aa13.15□□□□□ -0.3
ERBB3-216ENST00000550869 EPB41P11171 864 aaKnown RBP13.15□□□□□ -0.3
ERBB3-216ENST00000550869 CDK11BP21127 795 aaKnown RBP13.15□□□□□ -0.3
ERBB3-216ENST00000550869 CYP2J2P51589 502 aa13.15□□□□□ -0.3
ERBB3-216ENST00000550869 HSP90AA2PQ14568 343 aaPredicted RBP13.15□□□□□ -0.3
ERBB3-216ENST00000550869 DSC3Q14574 896 aa13.15□□□□□ -0.3
ERBB3-216ENST00000550869 NOLC1Q14978 699 aaKnown RBP eCLIP13.15□□□□□ -0.32e-6■■□□□ 12.3
ERBB3-216ENST00000550869 NR1I3Q14994 352 aa13.15□□□□□ -0.3
ERBB3-216ENST00000550869 CTC1Q2NKJ3 1217 aa13.15□□□□□ -0.3
ERBB3-216ENST00000550869 HSP90AA4PQ58FG1 418 aa13.15□□□□□ -0.3
ERBB3-216ENST00000550869 MIIPQ5JXC2 388 aa13.15□□□□□ -0.3
ERBB3-216ENST00000550869 CEP135Q66GS9 1140 aa13.15□□□□□ -0.3
ERBB3-216ENST00000550869 NPAS4Q8IUM7 802 aa13.15□□□□□ -0.3
ERBB3-216ENST00000550869 CMTR2Q8IYT2 770 aaKnown RBP13.15□□□□□ -0.3
ERBB3-216ENST00000550869 PPP2R3CQ969Q6 453 aa13.15□□□□□ -0.3
ERBB3-216ENST00000550869 CPB2Q96IY4 423 aa13.15□□□□□ -0.3
ERBB3-216ENST00000550869 NAP1L5Q96NT1 182 aaPredicted RBP13.15□□□□□ -0.3
ERBB3-216ENST00000550869 TUBGCP2Q9BSJ2 902 aa13.15□□□□□ -0.3
ERBB3-216ENST00000550869 TRAIPQ9BWF2 469 aa13.15□□□□□ -0.3
ERBB3-216ENST00000550869 CDT1Q9H211 546 aa13.15□□□□□ -0.3
ERBB3-216ENST00000550869 INTS13Q9NVM9 706 aa13.15□□□□□ -0.3
ERBB3-216ENST00000550869 CLDND1Q9NY35 253 aa13.15□□□□□ -0.3
ERBB3-216ENST00000550869 MAGEC2Q9UBF1 373 aaPredicted RBP13.15□□□□□ -0.3
ERBB3-216ENST00000550869 CPSF3Q9UKF6 684 aaKnown RBP13.15□□□□□ -0.3
ERBB3-216ENST00000550869 ST3GAL5Q9UNP4 418 aa13.15□□□□□ -0.3
ERBB3-216ENST00000550869 FRMD4BQ9Y2L6 1034 aa13.15□□□□□ -0.3
ERBB3-216ENST00000550869 RPS6KA5O75582 802 aa13.14□□□□□ -0.31
ERBB3-216ENST00000550869 STAG3L1P0CL83 205 aa13.14□□□□□ -0.31
ERBB3-216ENST00000550869 HOXD11P31277 338 aaPredicted RBP13.14□□□□□ -0.31
ERBB3-216ENST00000550869 CD52P31358 61 aa13.14□□□□□ -0.31
ERBB3-216ENST00000550869 COPB1P53618 953 aaKnown RBP13.14□□□□□ -0.31
ERBB3-216ENST00000550869 CLDN10P78369 228 aa13.14□□□□□ -0.31
ERBB3-216ENST00000550869 ZP2Q05996 745 aa13.14□□□□□ -0.31
ERBB3-216ENST00000550869 NCBP1Q09161 790 aaKnown RBP13.14□□□□□ -0.31
ERBB3-216ENST00000550869 PAK2Q13177 524 aa13.14□□□□□ -0.31
ERBB3-216ENST00000550869 SNRNP35Q16560 246 aaKnown RBP13.14□□□□□ -0.31
ERBB3-216ENST00000550869 MAN2A1Q16706 1144 aa13.14□□□□□ -0.31
ERBB3-216ENST00000550869 DCAF4L1Q3SXM0 396 aa13.14□□□□□ -0.31
ERBB3-216ENST00000550869 C1orf220Q5T0J3 134 aa13.14□□□□□ -0.31
ERBB3-216ENST00000550869 UBXN11Q5T124 520 aa13.14□□□□□ -0.31
ERBB3-216ENST00000550869 NOTUMQ6P988 496 aa13.14□□□□□ -0.31
ERBB3-216ENST00000550869 INTS8Q75QN2 995 aaKnown RBP13.14□□□□□ -0.31
ERBB3-216ENST00000550869 CBWD2Q8IUF1 395 aa13.14□□□□□ -0.31
ERBB3-216ENST00000550869 ADHFE1Q8IWW8 467 aa13.14□□□□□ -0.31
ERBB3-216ENST00000550869 FAM186BQ8IYM0 893 aa13.14□□□□□ -0.31
ERBB3-216ENST00000550869 CRIPAKQ8N1N5 446 aa13.14□□□□□ -0.31
ERBB3-216ENST00000550869 PLEKHO2Q8TD55 490 aa13.14□□□□□ -0.31
ERBB3-216ENST00000550869 TMC2Q8TDI7 906 aa13.14□□□□□ -0.31
ERBB3-216ENST00000550869 SLC35C1Q96A29 364 aa13.14□□□□□ -0.31
ERBB3-216ENST00000550869 POP1Q99575 1024 aaKnown RBP13.14□□□□□ -0.31
ERBB3-216ENST00000550869 MSTO1Q9BUK6 570 aa13.14□□□□□ -0.31
ERBB3-216ENST00000550869 TMX1Q9H3N1 280 aa13.14□□□□□ -0.31
ERBB3-216ENST00000550869 RTN4Q9NQC3 1192 aaKnown RBP13.14□□□□□ -0.31
ERBB3-216ENST00000550869 ARMCX3Q9UH62 379 aaPredicted RBP13.14□□□□□ -0.31
ERBB3-216ENST00000550869 PADI3Q9ULW8 664 aa13.14□□□□□ -0.31
ERBB3-216ENST00000550869 ANK1P16157 1881 aa13.14□□□□□ -0.31
ERBB3-216ENST00000550869 WDFY4Q6ZS81 3184 aa13.13□□□□□ -0.31
ERBB3-216ENST00000550869 GOLGA8IPA6NC78 632 aa13.13□□□□□ -0.31
ERBB3-216ENST00000550869 C19orf67A6NJJ6 358 aa13.13□□□□□ -0.31
ERBB3-216ENST00000550869 ZNF233A6NK53 670 aa13.13□□□□□ -0.31
ERBB3-216ENST00000550869 GOLGA8JA6NMD2 632 aa13.13□□□□□ -0.31
ERBB3-216ENST00000550869 GRM6O15303 877 aa13.13□□□□□ -0.31
ERBB3-216ENST00000550869 PMM2O15305 246 aa13.13□□□□□ -0.31
ERBB3-216ENST00000550869 DCXO43602 365 aa13.13□□□□□ -0.31
ERBB3-216ENST00000550869 PRKCSHP14314 528 aaPredicted RBP13.13□□□□□ -0.31
ERBB3-216ENST00000550869 PBX1P40424 430 aa13.13□□□□□ -0.31
ERBB3-216ENST00000550869 UBASH3AP57075 661 aa13.13□□□□□ -0.31
ERBB3-216ENST00000550869 PPP2R3AQ06190 1150 aa13.13□□□□□ -0.31
ERBB3-216ENST00000550869 CYP24A1Q07973 514 aa13.13□□□□□ -0.31
ERBB3-216ENST00000550869 BFSP1Q12934 665 aa13.13□□□□□ -0.31
ERBB3-216ENST00000550869 SMAD2Q15796 467 aaKnown RBP13.13□□□□□ -0.31
ERBB3-216ENST00000550869 KYAT1Q16773 422 aa13.13□□□□□ -0.31
ERBB3-216ENST00000550869 ZNF568Q3ZCX4 644 aa13.13□□□□□ -0.31
ERBB3-216ENST00000550869 ZBTB41Q5SVQ8 909 aa13.13□□□□□ -0.31
ERBB3-216ENST00000550869 SLC27A1Q6PCB7 646 aa13.13□□□□□ -0.31
ERBB3-216ENST00000550869 CDR2LQ86X02 465 aaPredicted RBP13.13□□□□□ -0.31
ERBB3-216ENST00000550869 ANKRD20A12PQ8NF67 263 aa13.13□□□□□ -0.31
ERBB3-216ENST00000550869 PARD3BQ8TEW8 1205 aa13.13□□□□□ -0.31
ERBB3-216ENST00000550869 SAAL1Q96ER3 474 aa13.13□□□□□ -0.31
ERBB3-216ENST00000550869 MRFAP1L1Q96HT8 127 aa13.13□□□□□ -0.31
ERBB3-216ENST00000550869 FAM213AQ9BRX8 229 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms