RNA–Protein interactions for RNA: ENST00000550716.1

ATP2B1-207, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2B1, Length 486 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-207ENST00000550716 PSMA5P28066 241 aa9.72□□□□□ -0.85
ATP2B1-207ENST00000550716 QARSP47897 775 aaKnown RBP9.72□□□□□ -0.85
ATP2B1-207ENST00000550716 RAB27AP51159 221 aa9.72□□□□□ -0.85
ATP2B1-207ENST00000550716 CLCN4P51793 760 aa9.72□□□□□ -0.85
ATP2B1-207ENST00000550716 SPIRE1Q08AE8 756 aa9.72□□□□□ -0.85
ATP2B1-207ENST00000550716 LAMTOR4Q0VGL1 99 aa9.72□□□□□ -0.85
ATP2B1-207ENST00000550716 SCRN1Q12765 414 aa9.72□□□□□ -0.85
ATP2B1-207ENST00000550716 PPP2R5CQ13362 524 aa9.72□□□□□ -0.85
ATP2B1-207ENST00000550716 EFHC2Q5JST6 749 aa9.72□□□□□ -0.85
ATP2B1-207ENST00000550716 KRT25Q7Z3Z0 450 aa9.72□□□□□ -0.85
ATP2B1-207ENST00000550716 MRPL10Q7Z7H8 261 aaKnown RBP9.72□□□□□ -0.85
ATP2B1-207ENST00000550716 GPR149Q86SP6 731 aa9.72□□□□□ -0.85
ATP2B1-207ENST00000550716 CABP7Q86V35 215 aa9.72□□□□□ -0.85
ATP2B1-207ENST00000550716 UBALD2Q8IYN6 164 aa9.72□□□□□ -0.85
ATP2B1-207ENST00000550716 CEP170P1Q96L14 293 aa9.72□□□□□ -0.85
ATP2B1-207ENST00000550716 PRRX2Q99811 253 aa9.72□□□□□ -0.85
ATP2B1-207ENST00000550716 LXNQ9BS40 222 aa9.72□□□□□ -0.85
ATP2B1-207ENST00000550716 PHF20Q9BVI0 1012 aa9.72□□□□□ -0.85
ATP2B1-207ENST00000550716 ZMYND15Q9H091 742 aa9.72□□□□□ -0.85
ATP2B1-207ENST00000550716 RSAD1Q9HA92 442 aa9.72□□□□□ -0.85
ATP2B1-207ENST00000550716 XPNPEP1Q9NQW7 623 aa9.72□□□□□ -0.85
ATP2B1-207ENST00000550716 DBR1Q9UK59 544 aaKnown RBP9.72□□□□□ -0.85
ATP2B1-207ENST00000550716 PRG3Q9Y2Y8 225 aaPredicted RBP9.72□□□□□ -0.85
ATP2B1-207ENST00000550716 HES2Q9Y543 173 aa9.72□□□□□ -0.85
ATP2B1-207ENST00000550716 SPTBN4Q9H254 2564 aa9.72□□□□□ -0.85
ATP2B1-207ENST00000550716 RIF1Q5UIP0 2472 aaKnown RBP9.71□□□□□ -0.85
ATP2B1-207ENST00000550716 DENND4AQ7Z401 1863 aa9.71□□□□□ -0.85
ATP2B1-207ENST00000550716 C2CD2LO14523 706 aa9.71□□□□□ -0.86
ATP2B1-207ENST00000550716 NRP1O14786 923 aa9.71□□□□□ -0.86
ATP2B1-207ENST00000550716 CPLX1O14810 134 aa9.71□□□□□ -0.86
ATP2B1-207ENST00000550716 PI15O43692 258 aa9.71□□□□□ -0.86
ATP2B1-207ENST00000550716 NARSO43776 548 aaKnown RBP9.71□□□□□ -0.86
ATP2B1-207ENST00000550716 TSPAN1O60635 241 aa9.71□□□□□ -0.86
ATP2B1-207ENST00000550716 CTDNEP1O95476 244 aa9.71□□□□□ -0.86
ATP2B1-207ENST00000550716 EFEMP2O95967 443 aa9.71□□□□□ -0.86
ATP2B1-207ENST00000550716 NPR3P17342 541 aa9.71□□□□□ -0.86
ATP2B1-207ENST00000550716 FOXK2Q01167 660 aa9.71□□□□□ -0.86
ATP2B1-207ENST00000550716 CYP4A11Q02928 519 aa9.71□□□□□ -0.86
ATP2B1-207ENST00000550716 CTTNQ14247 550 aaKnown RBP9.71□□□□□ -0.86
ATP2B1-207ENST00000550716 EMC2Q15006 297 aa9.71□□□□□ -0.86
ATP2B1-207ENST00000550716 CRTC2Q53ET0 693 aaPredicted RBP9.71□□□□□ -0.86
ATP2B1-207ENST00000550716 ATAT1Q5SQI0 421 aa9.71□□□□□ -0.86
ATP2B1-207ENST00000550716 NCAPH2Q6IBW4 605 aa9.71□□□□□ -0.86
ATP2B1-207ENST00000550716 PIK3AP1Q6ZUJ8 805 aa9.71□□□□□ -0.86
ATP2B1-207ENST00000550716 RNF149Q8NC42 400 aa9.71□□□□□ -0.86
ATP2B1-207ENST00000550716 TSEN2Q8NCE0 465 aaKnown RBP9.71□□□□□ -0.86
ATP2B1-207ENST00000550716 C1orf216Q8TAB5 229 aa9.71□□□□□ -0.86
ATP2B1-207ENST00000550716 ASAP3Q8TDY4 903 aa9.71□□□□□ -0.86
ATP2B1-207ENST00000550716 RSAD2Q8WXG1 361 aa9.71□□□□□ -0.86
ATP2B1-207ENST00000550716 SLC7A3Q8WY07 619 aa9.71□□□□□ -0.86
ATP2B1-207ENST00000550716 ZNF274Q96GC6 653 aaPredicted RBP9.71□□□□□ -0.86
ATP2B1-207ENST00000550716 DYDC2Q96IM9 177 aa9.71□□□□□ -0.86
ATP2B1-207ENST00000550716 CPB2Q96IY4 423 aa9.71□□□□□ -0.86
ATP2B1-207ENST00000550716 B3GALT6Q96L58 329 aa9.71□□□□□ -0.86
ATP2B1-207ENST00000550716 INO80BQ9C086 356 aaPredicted RBP9.71□□□□□ -0.86
ATP2B1-207ENST00000550716 CRISPLD1Q9H336 500 aa9.71□□□□□ -0.86
ATP2B1-207ENST00000550716 SFXN1Q9H9B4 322 aa9.71□□□□□ -0.86
ATP2B1-207ENST00000550716 MIOSQ9NXC5 875 aa9.71□□□□□ -0.86
ATP2B1-207ENST00000550716 CACNG4Q9UBN1 327 aa9.71□□□□□ -0.86
ATP2B1-207ENST00000550716 IPPQ9Y573 584 aa9.71□□□□□ -0.86
ATP2B1-207ENST00000550716 CYP46A1Q9Y6A2 500 aa9.71□□□□□ -0.86
ATP2B1-207ENST00000550716 DCHS1Q96JQ0 3298 aa9.71□□□□□ -0.86
ATP2B1-207ENST00000550716 A0A087WWV3 80 aa9.7□□□□□ -0.86
ATP2B1-207ENST00000550716 TEX28O15482 410 aa9.7□□□□□ -0.86
ATP2B1-207ENST00000550716 RFPL2O75678 378 aa9.7□□□□□ -0.86
ATP2B1-207ENST00000550716 P4HBP07237 508 aaKnown RBP9.7□□□□□ -0.86
ATP2B1-207ENST00000550716 NCLP19338 710 aaKnown RBP9.7□□□□□ -0.86
ATP2B1-207ENST00000550716 KLRC2P26717 231 aa9.7□□□□□ -0.86
ATP2B1-207ENST00000550716 YWHABP31946 246 aaKnown RBP9.7□□□□□ -0.86
ATP2B1-207ENST00000550716 MLH1P40692 756 aa9.7□□□□□ -0.86
ATP2B1-207ENST00000550716 SCNN1GP51170 649 aa9.7□□□□□ -0.86
ATP2B1-207ENST00000550716 CDC42EP1Q00587 391 aa9.7□□□□□ -0.86
ATP2B1-207ENST00000550716 LBRQ14739 615 aaKnown RBP9.7□□□□□ -0.86
ATP2B1-207ENST00000550716 EPHA7Q15375 998 aa9.7□□□□□ -0.86
ATP2B1-207ENST00000550716 CCDC149Q6ZUS6 474 aa9.7□□□□□ -0.86
ATP2B1-207ENST00000550716 SRGAP1Q7Z6B7 1085 aa9.7□□□□□ -0.86
ATP2B1-207ENST00000550716 FRMD5Q7Z6J6 570 aa9.7□□□□□ -0.86
ATP2B1-207ENST00000550716 NEK8Q86SG6 692 aa9.7□□□□□ -0.86
ATP2B1-207ENST00000550716 FERMT3Q86UX7 667 aa9.7□□□□□ -0.86
ATP2B1-207ENST00000550716 CDR2LQ86X02 465 aaPredicted RBP9.7□□□□□ -0.86
ATP2B1-207ENST00000550716 COLGALT2Q8IYK4 626 aa9.7□□□□□ -0.86
ATP2B1-207ENST00000550716 RNF168Q8IYW5 571 aaPredicted RBP9.7□□□□□ -0.86
ATP2B1-207ENST00000550716 TMEM87AQ8NBN3 555 aa9.7□□□□□ -0.86
ATP2B1-207ENST00000550716 FLCNQ8NFG4 579 aa9.7□□□□□ -0.86
ATP2B1-207ENST00000550716 ST13P5Q8NFI4 369 aaPredicted RBP9.7□□□□□ -0.86
ATP2B1-207ENST00000550716 URGCPQ8TCY9 931 aa9.7□□□□□ -0.86
ATP2B1-207ENST00000550716 ZDHHC1Q8WTX9 485 aa9.7□□□□□ -0.86
ATP2B1-207ENST00000550716 PSPC1Q8WXF1 523 aaKnown RBP9.7□□□□□ -0.86
ATP2B1-207ENST00000550716 RABGGTAQ92696 567 aa9.7□□□□□ -0.86
ATP2B1-207ENST00000550716 TNFRSF25Q93038 417 aa9.7□□□□□ -0.86
ATP2B1-207ENST00000550716 PGBD4Q96DM1 585 aa9.7□□□□□ -0.86
ATP2B1-207ENST00000550716 GAD1Q99259 594 aa9.7□□□□□ -0.86
ATP2B1-207ENST00000550716 TMEM175Q9BSA9 504 aa9.7□□□□□ -0.86
ATP2B1-207ENST00000550716 HERC2P3Q9BVR0 1158 aa9.7□□□□□ -0.86
ATP2B1-207ENST00000550716 APOL6Q9BWW8 343 aa9.7□□□□□ -0.86
ATP2B1-207ENST00000550716 TM6SF1Q9BZW5 370 aa9.7□□□□□ -0.86
ATP2B1-207ENST00000550716 TSPAN10Q9H1Z9 355 aaPredicted RBP9.7□□□□□ -0.86
ATP2B1-207ENST00000550716 SLKQ9H2G2 1235 aaPredicted RBP9.7□□□□□ -0.86
ATP2B1-207ENST00000550716 MAN1C1Q9NR34 630 aa9.7□□□□□ -0.86
ATP2B1-207ENST00000550716 TPCN1Q9ULQ1 816 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms