RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 B3GALT6Q96L58 329 aa14.95□□□□□ -0.02
TROAP-213ENST00000550709 NGRNQ9NPE2 291 aaKnown RBP14.95□□□□□ -0.02
TROAP-213ENST00000550709 SLC38A7Q9NVC3 462 aa14.95□□□□□ -0.02
TROAP-213ENST00000550709 TUBGCP4Q9UGJ1 667 aa14.95□□□□□ -0.02
TROAP-213ENST00000550709 MAPK8IP1Q9UQF2 711 aa14.95□□□□□ -0.02
TROAP-213ENST00000550709 FNDC1Q4ZHG4 1894 aaPredicted RBP14.95□□□□□ -0.02
TROAP-213ENST00000550709 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.94□□□□□ -0.02
TROAP-213ENST00000550709 C2CD2LO14523 706 aa14.94□□□□□ -0.02
TROAP-213ENST00000550709 TGFB1I1O43294 461 aa14.94□□□□□ -0.02
TROAP-213ENST00000550709 B3GAT3O94766 335 aa14.94□□□□□ -0.02
TROAP-213ENST00000550709 KIF4AO95239 1232 aa14.94□□□□□ -0.02
TROAP-213ENST00000550709 GARTP22102 1010 aa14.94□□□□□ -0.02
TROAP-213ENST00000550709 CYP2J2P51589 502 aa14.94□□□□□ -0.02
TROAP-213ENST00000550709 CLCNKBP51801 687 aa14.94□□□□□ -0.02
TROAP-213ENST00000550709 GUCY2FP51841 1108 aa14.94□□□□□ -0.02
TROAP-213ENST00000550709 UBE2HP62256 183 aa14.94□□□□□ -0.02
TROAP-213ENST00000550709 SMC1AQ14683 1233 aaKnown RBP14.94□□□□□ -0.02
TROAP-213ENST00000550709 BMS1Q14692 1282 aaKnown RBP14.94□□□□□ -0.02
TROAP-213ENST00000550709 KNOP1Q1ED39 458 aaKnown RBP14.94□□□□□ -0.02
TROAP-213ENST00000550709 JADE1Q6IE81 842 aa14.94□□□□□ -0.02
TROAP-213ENST00000550709 PDE12Q6L8Q7 609 aaKnown RBP14.94□□□□□ -0.02
TROAP-213ENST00000550709 CRELD2Q6UXH1 353 aaPredicted RBP14.94□□□□□ -0.02
TROAP-213ENST00000550709 HS2ST1Q7LGA3 356 aa14.94□□□□□ -0.02
TROAP-213ENST00000550709 MRPL43Q8N983 215 aaKnown RBP14.94□□□□□ -0.02
TROAP-213ENST00000550709 PPP2R3CQ969Q6 453 aa14.94□□□□□ -0.02
TROAP-213ENST00000550709 TIGD1Q96MW7 591 aa14.94□□□□□ -0.02
TROAP-213ENST00000550709 GPR62Q9BZJ7 368 aa14.94□□□□□ -0.02
TROAP-213ENST00000550709 ZBP1Q9H171 429 aa14.94□□□□□ -0.02
TROAP-213ENST00000550709 AGPAT3Q9NRZ7 376 aa14.94□□□□□ -0.02
TROAP-213ENST00000550709 HOOK1Q9UJC3 728 aaKnown RBP14.94□□□□□ -0.02
TROAP-213ENST00000550709 ADAM28Q9UKQ2 775 aa14.94□□□□□ -0.02
TROAP-213ENST00000550709 UBE4BO95155 1302 aa14.93□□□□□ -0.02
TROAP-213ENST00000550709 PODXLO00592 558 aa14.93□□□□□ -0.02
TROAP-213ENST00000550709 EXTL3O43909 919 aa14.93□□□□□ -0.02
TROAP-213ENST00000550709 RHOBTB3O94955 611 aa14.93□□□□□ -0.02
TROAP-213ENST00000550709 SMC2O95347 1197 aa14.93□□□□□ -0.02
TROAP-213ENST00000550709 NFICP08651 508 aa14.93□□□□□ -0.02
TROAP-213ENST00000550709 BMT2Q1RMZ1 405 aa14.93□□□□□ -0.02
TROAP-213ENST00000550709 KIAA1841Q6NSI8 718 aa14.93□□□□□ -0.02
TROAP-213ENST00000550709 FUT10Q6P4F1 479 aa14.93□□□□□ -0.02
TROAP-213ENST00000550709 DCLRE1AQ6PJP8 1040 aa14.93□□□□□ -0.02
TROAP-213ENST00000550709 HLA-CQ95604 372 aa14.93□□□□□ -0.02
TROAP-213ENST00000550709 SMARCE1Q969G3 411 aa14.93□□□□□ -0.02
TROAP-213ENST00000550709 CLDND1Q9NY35 253 aa14.93□□□□□ -0.02
TROAP-213ENST00000550709 HSPBP1Q9NZL4 362 aa14.93□□□□□ -0.02
TROAP-213ENST00000550709 PCDHA5Q9Y5H7 936 aa14.93□□□□□ -0.02
TROAP-213ENST00000550709 TCHHQ07283 1943 aa14.92□□□□□ -0.02
TROAP-213ENST00000550709 C2orf71A6NGG8 1288 aa14.92□□□□□ -0.02
TROAP-213ENST00000550709 I3L4J1 428 aa14.92□□□□□ -0.02
TROAP-213ENST00000550709 LINC01565O15544 149 aa14.92□□□□□ -0.02
TROAP-213ENST00000550709 LDHAP00338 332 aaKnown RBP14.92□□□□□ -0.02
TROAP-213ENST00000550709 SOD2P04179 222 aa14.92□□□□□ -0.02
TROAP-213ENST00000550709 URODP06132 367 aa14.92□□□□□ -0.02
TROAP-213ENST00000550709 CTSAP10619 480 aa14.92□□□□□ -0.02
TROAP-213ENST00000550709 WNT7BP56706 349 aa14.92□□□□□ -0.02
TROAP-213ENST00000550709 RBM10P98175 930 aaKnown RBP14.92□□□□□ -0.02
TROAP-213ENST00000550709 TFF2Q03403 129 aa14.92□□□□□ -0.02
TROAP-213ENST00000550709 KCNB1Q14721 858 aa14.92□□□□□ -0.02
TROAP-213ENST00000550709 TMEM132DQ14C87 1099 aa14.92□□□□□ -0.02
TROAP-213ENST00000550709 UPP1Q16831 310 aa14.92□□□□□ -0.02
TROAP-213ENST00000550709 LLGL2Q6P1M3 1020 aa14.92□□□□□ -0.02
TROAP-213ENST00000550709 CEP57Q86XR8 500 aa14.92□□□□□ -0.02
TROAP-213ENST00000550709 CBWD2Q8IUF1 395 aa14.92□□□□□ -0.02
TROAP-213ENST00000550709 SMYD4Q8IYR2 804 aaPredicted RBP14.92□□□□□ -0.02
TROAP-213ENST00000550709 GPD1LQ8N335 351 aa14.92□□□□□ -0.02
TROAP-213ENST00000550709 RDH13Q8NBN7 331 aa14.92□□□□□ -0.02
TROAP-213ENST00000550709 C3orf58Q8NDZ4 430 aa14.92□□□□□ -0.02
TROAP-213ENST00000550709 DDX27Q96GQ7 796 aaKnown RBP14.92□□□□□ -0.02
TROAP-213ENST00000550709 UROC1Q96N76 676 aa14.92□□□□□ -0.02
TROAP-213ENST00000550709 HERC2P3Q9BVR0 1158 aa14.92□□□□□ -0.02
TROAP-213ENST00000550709 MRPL17Q9NRX2 175 aaKnown RBP14.92□□□□□ -0.02
TROAP-213ENST00000550709 RBAKQ9NYW8 714 aaPredicted RBP14.92□□□□□ -0.02
TROAP-213ENST00000550709 UBQLN1Q9UMX0 589 aaKnown RBP14.92□□□□□ -0.02
TROAP-213ENST00000550709 SF3B1O75533 1304 aaKnown RBP eCLIP14.92□□□□□ -0.02
TROAP-213ENST00000550709 MYH11P35749 1972 aa14.91□□□□□ -0.02
TROAP-213ENST00000550709 COL4A4P53420 1690 aaPredicted RBP14.91□□□□□ -0.02
TROAP-213ENST00000550709 ADRB2P07550 413 aa14.91□□□□□ -0.02
TROAP-213ENST00000550709 KCNA5P22460 613 aa14.91□□□□□ -0.02
TROAP-213ENST00000550709 RPL9P32969 192 aaKnown RBP14.91□□□□□ -0.02
TROAP-213ENST00000550709 BRCC3P46736 316 aa14.91□□□□□ -0.02
TROAP-213ENST00000550709 PTPN14Q15678 1187 aa14.91□□□□□ -0.02
TROAP-213ENST00000550709 ZBTB6Q15916 424 aa14.91□□□□□ -0.02
TROAP-213ENST00000550709 FAM171A1Q5VUB5 890 aa14.91□□□□□ -0.02
TROAP-213ENST00000550709 ISM2Q6H9L7 571 aa14.91□□□□□ -0.02
TROAP-213ENST00000550709 BRSK2Q8IWQ3 736 aa14.91□□□□□ -0.02
TROAP-213ENST00000550709 CD302Q8IX05 232 aa14.91□□□□□ -0.02
TROAP-213ENST00000550709 BEST2Q8NFU1 509 aa14.91□□□□□ -0.02
TROAP-213ENST00000550709 RIN2Q8WYP3 895 aaPredicted RBP14.91□□□□□ -0.02
TROAP-213ENST00000550709 FAM84AQ96KN4 292 aa14.91□□□□□ -0.02
TROAP-213ENST00000550709 GBP4Q96PP9 640 aa14.91□□□□□ -0.02
TROAP-213ENST00000550709 ASB7Q9H672 318 aa14.91□□□□□ -0.02
TROAP-213ENST00000550709 UBE2ZQ9H832 354 aaPredicted RBP14.91□□□□□ -0.02
TROAP-213ENST00000550709 PDE11AQ9HCR9 933 aa14.91□□□□□ -0.02
TROAP-213ENST00000550709 RMND1Q9NWS8 449 aa14.91□□□□□ -0.02
TROAP-213ENST00000550709 THEGQ9P2T0 379 aa14.91□□□□□ -0.02
TROAP-213ENST00000550709 STK39Q9UEW8 545 aa14.91□□□□□ -0.02
TROAP-213ENST00000550709 NUB1Q9Y5A7 615 aa14.91□□□□□ -0.02
TROAP-213ENST00000550709 ZNF233A6NK53 670 aa14.9□□□□□ -0.02
TROAP-213ENST00000550709 H3BQ06 376 aaPredicted RBP14.9□□□□□ -0.02
TROAP-213ENST00000550709 KIAA0391O15091 583 aaKnown RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms