RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 INTS7Q9NVH2 962 aaKnown RBP3.89□□□□□ -1.79
CCNT1-203ENST00000550457 TRPM5Q9NZQ8 1165 aa3.89□□□□□ -1.79
CCNT1-203ENST00000550457 USP25Q9UHP3 1055 aa3.89□□□□□ -1.79
CCNT1-203ENST00000550457 EPN1Q9Y6I3 576 aaPredicted RBP3.89□□□□□ -1.79
CCNT1-203ENST00000550457 A2MP01023 1474 aa3.89□□□□□ -1.79
CCNT1-203ENST00000550457 TDRD9Q8NDG6 1382 aaKnown RBP3.89□□□□□ -1.79
CCNT1-203ENST00000550457 SBNO2Q9Y2G9 1366 aa3.89□□□□□ -1.79
CCNT1-203ENST00000550457 PDS5BQ9NTI5 1447 aa3.88□□□□□ -1.79
CCNT1-203ENST00000550457 PPP1R12AO14974 1030 aaPredicted RBP3.88□□□□□ -1.79
CCNT1-203ENST00000550457 MAFGO15525 162 aa3.88□□□□□ -1.79
CCNT1-203ENST00000550457 CTIFO43310 598 aaKnown RBP3.88□□□□□ -1.79
CCNT1-203ENST00000550457 CDC45O75419 566 aa3.88□□□□□ -1.79
CCNT1-203ENST00000550457 SEC24DO94855 1032 aaPredicted RBP3.88□□□□□ -1.79
CCNT1-203ENST00000550457 NDUFA10O95299 355 aa3.88□□□□□ -1.79
CCNT1-203ENST00000550457 CDK11BP21127 795 aaKnown RBP3.88□□□□□ -1.79
CCNT1-203ENST00000550457 GZMKP49863 264 aa3.88□□□□□ -1.79
CCNT1-203ENST00000550457 RNASE9P60153 205 aaKnown RBP3.88□□□□□ -1.79
CCNT1-203ENST00000550457 BEAN1Q3B7T3 259 aa3.88□□□□□ -1.79
CCNT1-203ENST00000550457 ALDH1L2Q3SY69 923 aa3.88□□□□□ -1.79
CCNT1-203ENST00000550457 DNTTIP2Q5QJE6 756 aaKnown RBP3.88□□□□□ -1.79
CCNT1-203ENST00000550457 STRIP1Q5VSL9 837 aa3.88□□□□□ -1.79
CCNT1-203ENST00000550457 IQSEC1Q6DN90 963 aa3.88□□□□□ -1.79
CCNT1-203ENST00000550457 CAVIN1Q6NZI2 390 aaKnown RBP3.88□□□□□ -1.79
CCNT1-203ENST00000550457 SYCE2Q6PIF2 218 aa3.88□□□□□ -1.79
CCNT1-203ENST00000550457 ATF7IPQ6VMQ6 1270 aa3.88□□□□□ -1.79
CCNT1-203ENST00000550457 TAS1R1Q7RTX1 841 aa3.88□□□□□ -1.79
CCNT1-203ENST00000550457 GDF7Q7Z4P5 450 aa3.88□□□□□ -1.79
CCNT1-203ENST00000550457 ANKRD7Q92527 254 aa3.88□□□□□ -1.79
CCNT1-203ENST00000550457 ARHGAP45Q92619 1136 aa3.88□□□□□ -1.79
CCNT1-203ENST00000550457 ZNF496Q96IT1 587 aaPredicted RBP3.88□□□□□ -1.79
CCNT1-203ENST00000550457 TSPY26PQ9H489 355 aa3.88□□□□□ -1.79
CCNT1-203ENST00000550457 ADARB2Q9NS39 739 aaKnown RBP3.88□□□□□ -1.79
CCNT1-203ENST00000550457 ZBTB40Q9NUA8 1239 aa3.88□□□□□ -1.79
CCNT1-203ENST00000550457 CGNQ9P2M7 1197 aaKnown RBP3.88□□□□□ -1.79
CCNT1-203ENST00000550457 ZHX1Q9UKY1 873 aaPredicted RBP3.88□□□□□ -1.79
CCNT1-203ENST00000550457 NAP1L2Q9ULW6 460 aaPredicted RBP3.88□□□□□ -1.79
CCNT1-203ENST00000550457 PCDHB6Q9Y5E3 794 aa3.88□□□□□ -1.79
CCNT1-203ENST00000550457 KIF24Q5T7B8 1368 aa3.88□□□□□ -1.79
CCNT1-203ENST00000550457 RAPGEF6Q8TEU7 1601 aa3.88□□□□□ -1.79
CCNT1-203ENST00000550457 RNF17Q9BXT8 1623 aaKnown RBP3.88□□□□□ -1.79
CCNT1-203ENST00000550457 PLA2R1Q13018 1463 aa3.87□□□□□ -1.79
CCNT1-203ENST00000550457 IFT140Q96RY7 1462 aa3.87□□□□□ -1.79
CCNT1-203ENST00000550457 A0A1W2PR48 441 aa3.87□□□□□ -1.79
CCNT1-203ENST00000550457 LCHNA4D1U4 455 aa3.87□□□□□ -1.79
CCNT1-203ENST00000550457 FAM83GA6ND36 823 aa3.87□□□□□ -1.79
CCNT1-203ENST00000550457 PLEKHD1A6NEE1 506 aa3.87□□□□□ -1.79
CCNT1-203ENST00000550457 RNASET2O00584 256 aaKnown RBP3.87□□□□□ -1.79
CCNT1-203ENST00000550457 ZNF185O15231 689 aa3.87□□□□□ -1.79
CCNT1-203ENST00000550457 EPB41L2O43491 1005 aaKnown RBP3.87□□□□□ -1.79
CCNT1-203ENST00000550457 TGM5O43548 720 aa3.87□□□□□ -1.79
CCNT1-203ENST00000550457 PFKMP08237 780 aa3.87□□□□□ -1.79
CCNT1-203ENST00000550457 PTH2RP49190 550 aa3.87□□□□□ -1.79
CCNT1-203ENST00000550457 WNT3AP56704 352 aa3.87□□□□□ -1.79
CCNT1-203ENST00000550457 FOXI1Q12951 378 aa3.87□□□□□ -1.79
CCNT1-203ENST00000550457 CFAP100Q494V2 611 aa3.87□□□□□ -1.79
CCNT1-203ENST00000550457 ANKS6Q68DC2 871 aa3.87□□□□□ -1.79
CCNT1-203ENST00000550457 UBE2R2Q712K3 238 aaPredicted RBP3.87□□□□□ -1.79
CCNT1-203ENST00000550457 CCDC146Q8IYE0 955 aa3.87□□□□□ -1.79
CCNT1-203ENST00000550457 ZZZ3Q8IYH5 903 aa3.87□□□□□ -1.79
CCNT1-203ENST00000550457 CMTR2Q8IYT2 770 aaKnown RBP3.87□□□□□ -1.79
CCNT1-203ENST00000550457 CDYL2Q8N8U2 506 aa3.87□□□□□ -1.79
CCNT1-203ENST00000550457 LINC00476Q8WZB0 136 aa3.87□□□□□ -1.79
CCNT1-203ENST00000550457 NAF1Q96HR8 494 aaKnown RBP3.87□□□□□ -1.79
CCNT1-203ENST00000550457 TIGD1Q96MW7 591 aa3.87□□□□□ -1.79
CCNT1-203ENST00000550457 ORAI3Q9BRQ5 295 aa3.87□□□□□ -1.79
CCNT1-203ENST00000550457 MS4A5Q9H3V2 200 aa3.87□□□□□ -1.79
CCNT1-203ENST00000550457 ALG13Q9NP73 1137 aaKnown RBP3.87□□□□□ -1.79
CCNT1-203ENST00000550457 TMEM51Q9NW97 253 aa3.87□□□□□ -1.79
CCNT1-203ENST00000550457 CALCOCO1Q9P1Z2 691 aa3.87□□□□□ -1.79
CCNT1-203ENST00000550457 USP18Q9UMW8 372 aa3.87□□□□□ -1.79
CCNT1-203ENST00000550457 PAXBP1Q9Y5B6 917 aa3.87□□□□□ -1.79
CCNT1-203ENST00000550457 COX11Q9Y6N1 276 aa3.87□□□□□ -1.79
CCNT1-203ENST00000550457 NEURL4Q96JN8 1562 aa3.87□□□□□ -1.79
CCNT1-203ENST00000550457 SHROOM2Q13796 1616 aa3.87□□□□□ -1.79
CCNT1-203ENST00000550457 NSD2O96028 1365 aa3.87□□□□□ -1.79
CCNT1-203ENST00000550457 ANKRD36BQ8N2N9 1353 aa3.87□□□□□ -1.79
CCNT1-203ENST00000550457 PRG4Q92954 1404 aaPredicted RBP3.87□□□□□ -1.79
CCNT1-203ENST00000550457 MYOM2P54296 1465 aa3.86□□□□□ -1.79
CCNT1-203ENST00000550457 IQSEC2Q5JU85 1478 aa3.86□□□□□ -1.79
CCNT1-203ENST00000550457 DISP1Q96F81 1524 aa3.86□□□□□ -1.79
CCNT1-203ENST00000550457 DUOX2Q9NRD8 1548 aa3.86□□□□□ -1.79
CCNT1-203ENST00000550457 UNC13BO14795 1591 aa3.86□□□□□ -1.79
CCNT1-203ENST00000550457 KIAA0556O60303 1618 aa3.86□□□□□ -1.79
CCNT1-203ENST00000550457 UNC119BA6NIH7 251 aa3.86□□□□□ -1.79
CCNT1-203ENST00000550457 ZNF891A8MT65 544 aaPredicted RBP3.86□□□□□ -1.79
CCNT1-203ENST00000550457 REC8O95072 547 aa3.86□□□□□ -1.79
CCNT1-203ENST00000550457 BMPR1AP36894 532 aa3.86□□□□□ -1.79
CCNT1-203ENST00000550457 SEC24CP53992 1094 aa3.86□□□□□ -1.79
CCNT1-203ENST00000550457 USP14P54578 494 aa3.86□□□□□ -1.79
CCNT1-203ENST00000550457 NHLH2Q02577 135 aa3.86□□□□□ -1.79
CCNT1-203ENST00000550457 DUSP2Q05923 314 aa3.86□□□□□ -1.79
CCNT1-203ENST00000550457 LRRC32Q14392 662 aa3.86□□□□□ -1.79
CCNT1-203ENST00000550457 PDCD4Q53EL6 469 aaKnown RBP3.86□□□□□ -1.79
CCNT1-203ENST00000550457 RD3Q7Z3Z2 195 aa3.86□□□□□ -1.79
CCNT1-203ENST00000550457 GLCCI1Q86VQ1 547 aa3.86□□□□□ -1.79
CCNT1-203ENST00000550457 LYSMD2Q8IV50 215 aa3.86□□□□□ -1.79
CCNT1-203ENST00000550457 NXPE1Q8N323 547 aa3.86□□□□□ -1.79
CCNT1-203ENST00000550457 TCP11L2Q8N4U5 519 aa3.86□□□□□ -1.79
CCNT1-203ENST00000550457 SUPT20HQ8NEM7 779 aa3.86□□□□□ -1.79
CCNT1-203ENST00000550457 CHTF18Q8WVB6 975 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms