RNA–Protein interactions for RNA: ENST00000550274.1

LETMD1-222, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-222ENST00000550274 ARHGEF35A5YM69 484 aa13.86□□□□□ -0.19
LETMD1-222ENST00000550274 TMEM189-UBE2V1I3L0A0 370 aa13.86□□□□□ -0.19
LETMD1-222ENST00000550274 I3L4J1 428 aa13.86□□□□□ -0.19
LETMD1-222ENST00000550274 XYLBO75191 536 aa13.86□□□□□ -0.19
LETMD1-222ENST00000550274 TKTP29401 623 aaKnown RBP13.86□□□□□ -0.19
LETMD1-222ENST00000550274 CLCNKBP51801 687 aa13.86□□□□□ -0.19
LETMD1-222ENST00000550274 MLF2Q15773 248 aaPredicted RBP13.86□□□□□ -0.19
LETMD1-222ENST00000550274 ECM1Q16610 540 aa13.86□□□□□ -0.19
LETMD1-222ENST00000550274 NT5DC1Q5TFE4 455 aa13.86□□□□□ -0.19
LETMD1-222ENST00000550274 PDXDC1Q6P996 788 aa13.86□□□□□ -0.19
LETMD1-222ENST00000550274 MTSS1LQ765P7 747 aa13.86□□□□□ -0.19
LETMD1-222ENST00000550274 KIAA2013Q8IYS2 634 aa13.86□□□□□ -0.19
LETMD1-222ENST00000550274 C3orf58Q8NDZ4 430 aa13.86□□□□□ -0.19
LETMD1-222ENST00000550274 ING5Q8WYH8 240 aa13.86□□□□□ -0.19
LETMD1-222ENST00000550274 RMDN1Q96DB5 314 aa13.86□□□□□ -0.19
LETMD1-222ENST00000550274 SHDQ96IW2 340 aa13.86□□□□□ -0.19
LETMD1-222ENST00000550274 KXD1Q9BQD3 176 aa13.86□□□□□ -0.19
LETMD1-222ENST00000550274 MTF2Q9Y483 593 aaPredicted RBP13.86□□□□□ -0.19
LETMD1-222ENST00000550274 CDY1Q9Y6F8 540 aa13.86□□□□□ -0.19
LETMD1-222ENST00000550274 KANSL1LA0AUZ9 987 aa13.85□□□□□ -0.19
LETMD1-222ENST00000550274 B3GAT3O94766 335 aa13.85□□□□□ -0.19
LETMD1-222ENST00000550274 POU2F2P09086 479 aa13.85□□□□□ -0.19
LETMD1-222ENST00000550274 OR52Z1P0C646 297 aa13.85□□□□□ -0.19
LETMD1-222ENST00000550274 RBM25P49756 843 aaKnown RBP13.85□□□□□ -0.19
LETMD1-222ENST00000550274 ZNF174Q15697 407 aa13.85□□□□□ -0.19
LETMD1-222ENST00000550274 UPP1Q16831 310 aa13.85□□□□□ -0.19
LETMD1-222ENST00000550274 DCAF4L1Q3SXM0 396 aa13.85□□□□□ -0.19
LETMD1-222ENST00000550274 PABPC1LQ4VXU2 614 aaKnown RBP13.85□□□□□ -0.19
LETMD1-222ENST00000550274 ATF7IP2Q5U623 682 aa13.85□□□□□ -0.19
LETMD1-222ENST00000550274 ZC3H14Q6PJT7 736 aaKnown RBP13.85□□□□□ -0.19
LETMD1-222ENST00000550274 POTEHQ6S545 545 aa13.85□□□□□ -0.19
LETMD1-222ENST00000550274 CEP120Q8N960 986 aa13.85□□□□□ -0.19
LETMD1-222ENST00000550274 DDX27Q96GQ7 796 aaKnown RBP13.85□□□□□ -0.19
LETMD1-222ENST00000550274 CD72P21854 359 aa13.84□□□□□ -0.19
LETMD1-222ENST00000550274 BRCC3P46736 316 aa13.84□□□□□ -0.19
LETMD1-222ENST00000550274 NEK4P51957 841 aa13.84□□□□□ -0.19
LETMD1-222ENST00000550274 PRKCQQ04759 706 aa13.84□□□□□ -0.19
LETMD1-222ENST00000550274 SOX4Q06945 474 aaPredicted RBP13.84□□□□□ -0.19
LETMD1-222ENST00000550274 UBXN2BQ14CS0 331 aa13.84□□□□□ -0.19
LETMD1-222ENST00000550274 PPP2R5AQ15172 486 aa13.84□□□□□ -0.19
LETMD1-222ENST00000550274 SLC5A9Q2M3M2 681 aa13.84□□□□□ -0.19
LETMD1-222ENST00000550274 UVSSAQ2YD98 709 aa13.84□□□□□ -0.19
LETMD1-222ENST00000550274 SLC44A4Q53GD3 710 aa13.84□□□□□ -0.19
LETMD1-222ENST00000550274 DCLK2Q8N568 766 aa13.84□□□□□ -0.19
LETMD1-222ENST00000550274 ERMNQ8TAM6 284 aa13.84□□□□□ -0.19
LETMD1-222ENST00000550274 BHMT2Q9H2M3 363 aa13.84□□□□□ -0.19
LETMD1-222ENST00000550274 RALGAPA1Q6GYQ0 2036 aa13.84□□□□□ -0.19
LETMD1-222ENST00000550274 KIF26AQ9ULI4 1882 aaPredicted RBP13.84□□□□□ -0.19
LETMD1-222ENST00000550274 EFNA5P52803 228 aa13.83□□□□□ -0.2
LETMD1-222ENST00000550274 SAFBQ15424 915 aaKnown RBP eCLIP13.83□□□□□ -0.2
LETMD1-222ENST00000550274 SUMF1Q8NBK3 374 aa13.83□□□□□ -0.2
LETMD1-222ENST00000550274 MCRS1Q96EZ8 462 aa13.83□□□□□ -0.2
LETMD1-222ENST00000550274 IFT74Q96LB3 600 aa13.83□□□□□ -0.2
LETMD1-222ENST00000550274 HINFPQ9BQA5 517 aa13.83□□□□□ -0.2
LETMD1-222ENST00000550274 BCO2Q9BYV7 579 aa13.83□□□□□ -0.2
LETMD1-222ENST00000550274 PLA2G2FQ9BZM2 168 aa13.83□□□□□ -0.2
LETMD1-222ENST00000550274 LTB4R2Q9NPC1 389 aa13.83□□□□□ -0.2
LETMD1-222ENST00000550274 SPATA6Q9NWH7 488 aaPredicted RBP13.83□□□□□ -0.2
LETMD1-222ENST00000550274 KCNH3Q9ULD8 1083 aa13.83□□□□□ -0.2
LETMD1-222ENST00000550274 MRPS23Q9Y3D9 190 aaKnown RBP13.83□□□□□ -0.2
LETMD1-222ENST00000550274 BACE2Q9Y5Z0 518 aa13.83□□□□□ -0.2
LETMD1-222ENST00000550274 SMIM28A0A1B0GU29 152 aa13.82□□□□□ -0.2
LETMD1-222ENST00000550274 MED19A0JLT2 244 aaPredicted RBP13.82□□□□□ -0.2
LETMD1-222ENST00000550274 FAM170BA6NMN3 283 aa13.82□□□□□ -0.2
LETMD1-222ENST00000550274 RHOP08100 348 aa13.82□□□□□ -0.2
LETMD1-222ENST00000550274 CEBPBP17676 345 aa13.82□□□□□ -0.2
LETMD1-222ENST00000550274 MUTP22033 750 aa13.82□□□□□ -0.2
LETMD1-222ENST00000550274 CCT6AP40227 531 aaKnown RBP13.82□□□□□ -0.2
LETMD1-222ENST00000550274 OSTNP61366 133 aa13.82□□□□□ -0.2
LETMD1-222ENST00000550274 PFKPQ01813 784 aa13.82□□□□□ -0.2
LETMD1-222ENST00000550274 ROR1Q01973 937 aa13.82□□□□□ -0.2
LETMD1-222ENST00000550274 ORC2Q13416 577 aaPredicted RBP13.82□□□□□ -0.2
LETMD1-222ENST00000550274 NBR1Q14596 966 aa13.82□□□□□ -0.2
LETMD1-222ENST00000550274 TTC38Q5R3I4 469 aa13.82□□□□□ -0.2
LETMD1-222ENST00000550274 HAUS3Q68CZ6 603 aa13.82□□□□□ -0.2
LETMD1-222ENST00000550274 ANKS3Q6ZW76 656 aa13.82□□□□□ -0.2
LETMD1-222ENST00000550274 RUBCNQ92622 972 aa13.82□□□□□ -0.2
LETMD1-222ENST00000550274 KIFAP3Q92845 792 aa13.82□□□□□ -0.2
LETMD1-222ENST00000550274 C8orf76Q96K31 380 aa13.82□□□□□ -0.2
LETMD1-222ENST00000550274 UROC1Q96N76 676 aa13.82□□□□□ -0.2
LETMD1-222ENST00000550274 ZMAT2Q96NC0 199 aaKnown RBP13.82□□□□□ -0.2
LETMD1-222ENST00000550274 CDT1Q9H211 546 aa13.82□□□□□ -0.2
LETMD1-222ENST00000550274 TNFSF13BQ9Y275 285 aa13.82□□□□□ -0.2
LETMD1-222ENST00000550274 TPRP12270 2363 aaKnown RBP13.81□□□□□ -0.2
LETMD1-222ENST00000550274 TSC2P49815 1807 aa13.81□□□□□ -0.2
LETMD1-222ENST00000550274 NUP210Q8TEM1 1887 aaPredicted RBP13.81□□□□□ -0.2
LETMD1-222ENST00000550274 WDR27A2RRH5 827 aa13.81□□□□□ -0.2
LETMD1-222ENST00000550274 SHISA7A6NL88 538 aa13.81□□□□□ -0.2
LETMD1-222ENST00000550274 K7ERI5 159 aa13.81□□□□□ -0.2
LETMD1-222ENST00000550274 NRG2O14511 850 aaPredicted RBP13.81□□□□□ -0.2
LETMD1-222ENST00000550274 LAMTOR5O43504 91 aa13.81□□□□□ -0.2
LETMD1-222ENST00000550274 KINO60870 393 aaKnown RBP13.81□□□□□ -0.2
LETMD1-222ENST00000550274 ECI2O75521 394 aa13.81□□□□□ -0.2
LETMD1-222ENST00000550274 TARSP26639 723 aaKnown RBP13.81□□□□□ -0.2
LETMD1-222ENST00000550274 GRM5P41594 1212 aa13.81□□□□□ -0.2
LETMD1-222ENST00000550274 FXR2P51116 673 aaKnown RBP eCLIP13.81□□□□□ -0.2
LETMD1-222ENST00000550274 ZNF568Q3ZCX4 644 aa13.81□□□□□ -0.2
LETMD1-222ENST00000550274 XKR4Q5GH76 650 aa13.81□□□□□ -0.2
LETMD1-222ENST00000550274 VARS2Q5ST30 1063 aaKnown RBP13.81□□□□□ -0.2
LETMD1-222ENST00000550274 TANGO2Q6ICL3 276 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms