RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 CDY1Q9Y6F8 540 aa16.96■□□□□ 0.31
RAB5C-205ENST00000550013 GPR179Q6PRD1 2367 aa16.96■□□□□ 0.31
RAB5C-205ENST00000550013 CEP250Q9BV73 2442 aa16.96■□□□□ 0.3
RAB5C-205ENST00000550013 POU2F2P09086 479 aa16.95■□□□□ 0.3
RAB5C-205ENST00000550013 CCT6AP40227 531 aaKnown RBP16.95■□□□□ 0.3
RAB5C-205ENST00000550013 BRCC3P46736 316 aa16.95■□□□□ 0.3
RAB5C-205ENST00000550013 EFNA5P52803 228 aa16.95■□□□□ 0.3
RAB5C-205ENST00000550013 SOX4Q06945 474 aaPredicted RBP16.95■□□□□ 0.3
RAB5C-205ENST00000550013 MLF2Q15773 248 aaPredicted RBP16.95■□□□□ 0.3
RAB5C-205ENST00000550013 UPP1Q16831 310 aa16.95■□□□□ 0.3
RAB5C-205ENST00000550013 UVSSAQ2YD98 709 aa16.95■□□□□ 0.3
RAB5C-205ENST00000550013 PABPC1LQ4VXU2 614 aaKnown RBP16.95■□□□□ 0.3
RAB5C-205ENST00000550013 ERMP1Q7Z2K6 904 aa16.95■□□□□ 0.3
RAB5C-205ENST00000550013 KIAA2013Q8IYS2 634 aa16.95■□□□□ 0.3
RAB5C-205ENST00000550013 CEP120Q8N960 986 aa16.95■□□□□ 0.3
RAB5C-205ENST00000550013 DDX23Q9BUQ8 820 aaKnown RBP16.95■□□□□ 0.3
RAB5C-205ENST00000550013 BHMT2Q9H2M3 363 aa16.95■□□□□ 0.3
RAB5C-205ENST00000550013 CITO14578 2027 aa16.94■□□□□ 0.3
RAB5C-205ENST00000550013 KANSL1LA0AUZ9 987 aa16.94■□□□□ 0.3
RAB5C-205ENST00000550013 CD72P21854 359 aa16.94■□□□□ 0.3
RAB5C-205ENST00000550013 NBR1Q14596 966 aa16.94■□□□□ 0.3
RAB5C-205ENST00000550013 UBXN2BQ14CS0 331 aa16.94■□□□□ 0.3
RAB5C-205ENST00000550013 SLC44A4Q53GD3 710 aa16.94■□□□□ 0.3
RAB5C-205ENST00000550013 TTC38Q5R3I4 469 aa16.94■□□□□ 0.3
RAB5C-205ENST00000550013 ZC3H14Q6PJT7 736 aaKnown RBP16.94■□□□□ 0.3
RAB5C-205ENST00000550013 KIFAP3Q92845 792 aa16.94■□□□□ 0.3
RAB5C-205ENST00000550013 C8orf76Q96K31 380 aa16.94■□□□□ 0.3
RAB5C-205ENST00000550013 KCNH3Q9ULD8 1083 aa16.94■□□□□ 0.3
RAB5C-205ENST00000550013 BACE2Q9Y5Z0 518 aa16.94■□□□□ 0.3
RAB5C-205ENST00000550013 SMIM28A0A1B0GU29 152 aa16.93■□□□□ 0.3
RAB5C-205ENST00000550013 MUTP22033 750 aa16.93■□□□□ 0.3
RAB5C-205ENST00000550013 OSTNP61366 133 aa16.93■□□□□ 0.3
RAB5C-205ENST00000550013 PRKCQQ04759 706 aa16.93■□□□□ 0.3
RAB5C-205ENST00000550013 ORC2Q13416 577 aaPredicted RBP16.93■□□□□ 0.3
RAB5C-205ENST00000550013 SLC5A9Q2M3M2 681 aa16.93■□□□□ 0.3
RAB5C-205ENST00000550013 HAUS3Q68CZ6 603 aa16.93■□□□□ 0.3
RAB5C-205ENST00000550013 POTEHQ6S545 545 aa16.93■□□□□ 0.3
RAB5C-205ENST00000550013 ANKS3Q6ZW76 656 aa16.93■□□□□ 0.3
RAB5C-205ENST00000550013 CCDC83Q8IWF9 413 aa16.93■□□□□ 0.3
RAB5C-205ENST00000550013 C4orf32Q8N8J7 132 aa16.93■□□□□ 0.3
RAB5C-205ENST00000550013 RMDN1Q96DB5 314 aa16.93■□□□□ 0.3
RAB5C-205ENST00000550013 MCRS1Q96EZ8 462 aa16.93■□□□□ 0.3
RAB5C-205ENST00000550013 UROC1Q96N76 676 aa16.93■□□□□ 0.3
RAB5C-205ENST00000550013 CDT1Q9H211 546 aa16.93■□□□□ 0.3
RAB5C-205ENST00000550013 FOXP1Q9H334 677 aaPredicted RBP16.93■□□□□ 0.3
RAB5C-205ENST00000550013 SPATA6Q9NWH7 488 aaPredicted RBP16.93■□□□□ 0.3
RAB5C-205ENST00000550013 KIAA1024Q9UPX6 916 aa16.93■□□□□ 0.3
RAB5C-205ENST00000550013 TNFSF13BQ9Y275 285 aa16.93■□□□□ 0.3
RAB5C-205ENST00000550013 MRPS23Q9Y3D9 190 aaKnown RBP16.93■□□□□ 0.3
RAB5C-205ENST00000550013 FAM170BA6NMN3 283 aa16.92■□□□□ 0.3
RAB5C-205ENST00000550013 CCDC169A6NNP5 214 aa16.92■□□□□ 0.3
RAB5C-205ENST00000550013 K7ERI5 159 aa16.92■□□□□ 0.3
RAB5C-205ENST00000550013 TRAPPC3O43617 180 aa16.92■□□□□ 0.3
RAB5C-205ENST00000550013 RHOP08100 348 aa16.92■□□□□ 0.3
RAB5C-205ENST00000550013 CEBPBP17676 345 aa16.92■□□□□ 0.3
RAB5C-205ENST00000550013 GRM5P41594 1212 aa16.92■□□□□ 0.3
RAB5C-205ENST00000550013 FXR2P51116 673 aaKnown RBP eCLIP16.92■□□□□ 0.3
RAB5C-205ENST00000550013 ROR1Q01973 937 aa16.92■□□□□ 0.3
RAB5C-205ENST00000550013 DCLK2Q8N568 766 aa16.92■□□□□ 0.3
RAB5C-205ENST00000550013 ACO2Q99798 780 aaKnown RBP16.92■□□□□ 0.3
RAB5C-205ENST00000550013 HINFPQ9BQA5 517 aa16.92■□□□□ 0.3
RAB5C-205ENST00000550013 BCO2Q9BYV7 579 aa16.92■□□□□ 0.3
RAB5C-205ENST00000550013 PLA2G2FQ9BZM2 168 aa16.92■□□□□ 0.3
RAB5C-205ENST00000550013 LTB4R2Q9NPC1 389 aa16.92■□□□□ 0.3
RAB5C-205ENST00000550013 DDX19AQ9NUU7 478 aaKnown RBP16.92■□□□□ 0.3
RAB5C-205ENST00000550013 LRWD1Q9UFC0 647 aa16.92■□□□□ 0.3
RAB5C-205ENST00000550013 PDCD11Q14690 1871 aaKnown RBP16.91■□□□□ 0.3
RAB5C-205ENST00000550013 NPTX2P47972 431 aa16.91■□□□□ 0.3
RAB5C-205ENST00000550013 PEX3P56589 373 aa16.91■□□□□ 0.3
RAB5C-205ENST00000550013 PFKPQ01813 784 aa16.91■□□□□ 0.3
RAB5C-205ENST00000550013 ZNF568Q3ZCX4 644 aa16.91■□□□□ 0.3
RAB5C-205ENST00000550013 VARS2Q5ST30 1063 aaKnown RBP16.91■□□□□ 0.3
RAB5C-205ENST00000550013 ALKAL1Q6UXT8 129 aa16.91■□□□□ 0.3
RAB5C-205ENST00000550013 RTL10Q7L3V2 364 aa16.91■□□□□ 0.3
RAB5C-205ENST00000550013 TAS1R3Q7RTX0 852 aa16.91■□□□□ 0.3
RAB5C-205ENST00000550013 APBB1IPQ7Z5R6 666 aaPredicted RBP16.91■□□□□ 0.3
RAB5C-205ENST00000550013 DAW1Q8N136 415 aa16.91■□□□□ 0.3
RAB5C-205ENST00000550013 ZMAT2Q96NC0 199 aaKnown RBP16.91■□□□□ 0.3
RAB5C-205ENST00000550013 CCDC94Q9BW85 323 aaPredicted RBP16.91■□□□□ 0.3
RAB5C-205ENST00000550013 PTPRHQ9HD43 1115 aa16.91■□□□□ 0.3
RAB5C-205ENST00000550013 PHLPP2Q6ZVD8 1323 aa16.91■□□□□ 0.3
RAB5C-205ENST00000550013 DNAH14Q0VDD8 3507 aa16.9■□□□□ 0.3
RAB5C-205ENST00000550013 WDR27A2RRH5 827 aa16.9■□□□□ 0.3
RAB5C-205ENST00000550013 E9PMD0 336 aa16.9■□□□□ 0.3
RAB5C-205ENST00000550013 PODXLO00592 558 aa16.9■□□□□ 0.3
RAB5C-205ENST00000550013 LAMTOR5O43504 91 aa16.9■□□□□ 0.3
RAB5C-205ENST00000550013 HIP1RO75146 1068 aa16.9■□□□□ 0.3
RAB5C-205ENST00000550013 SEC24BO95487 1268 aa16.9■□□□□ 0.3
RAB5C-205ENST00000550013 YARSP54577 528 aaKnown RBP16.9■□□□□ 0.3
RAB5C-205ENST00000550013 ARPP19P56211 112 aa16.9■□□□□ 0.3
RAB5C-205ENST00000550013 XKR4Q5GH76 650 aa16.9■□□□□ 0.3
RAB5C-205ENST00000550013 TANGO2Q6ICL3 276 aa16.9■□□□□ 0.3
RAB5C-205ENST00000550013 SLC8B1Q6J4K2 584 aa16.9■□□□□ 0.3
RAB5C-205ENST00000550013 TPRG1Q6ZUI0 275 aa16.9■□□□□ 0.3
RAB5C-205ENST00000550013 SUMF1Q8NBK3 374 aa16.9■□□□□ 0.3
RAB5C-205ENST00000550013 FBXO18Q8NFZ0 1043 aa16.9■□□□□ 0.3
RAB5C-205ENST00000550013 ZNF461Q8TAF7 563 aa16.9■□□□□ 0.3
RAB5C-205ENST00000550013 SNX29Q8TEQ0 813 aa16.9■□□□□ 0.3
RAB5C-205ENST00000550013 RUBCNQ92622 972 aa16.9■□□□□ 0.3
RAB5C-205ENST00000550013 TARS2Q9BW92 718 aaKnown RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms