RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 RASA3Q14644 834 aa14.64□□□□□ -0.07
HDAC7-228ENST00000548938 SIAH1Q8IUQ4 282 aa14.64□□□□□ -0.07
HDAC7-228ENST00000548938 FAM71AQ8IYT1 594 aa14.64□□□□□ -0.07
HDAC7-228ENST00000548938 DAW1Q8N136 415 aa14.64□□□□□ -0.07
HDAC7-228ENST00000548938 PPM1KQ8N3J5 372 aa14.64□□□□□ -0.07
HDAC7-228ENST00000548938 NAF1Q96HR8 494 aaKnown RBP14.64□□□□□ -0.07
HDAC7-228ENST00000548938 MOV10L1Q9BXT6 1211 aaKnown RBP14.64□□□□□ -0.07
HDAC7-228ENST00000548938 ANAPC5Q9UJX4 755 aa14.64□□□□□ -0.07
HDAC7-228ENST00000548938 R3HDM2Q9Y2K5 976 aaKnown RBP14.64□□□□□ -0.07
HDAC7-228ENST00000548938 LIN7AO14910 233 aaPredicted RBP14.63□□□□□ -0.07
HDAC7-228ENST00000548938 CDH16O75309 829 aa14.63□□□□□ -0.07
HDAC7-228ENST00000548938 TCEA3O75764 348 aa14.63□□□□□ -0.07
HDAC7-228ENST00000548938 CYP3A4P08684 503 aa14.63□□□□□ -0.07
HDAC7-228ENST00000548938 UBXN2AP68543 259 aa14.63□□□□□ -0.07
HDAC7-228ENST00000548938 DNAJC3Q13217 504 aa14.63□□□□□ -0.07
HDAC7-228ENST00000548938 TMED2Q15363 201 aa14.63□□□□□ -0.07
HDAC7-228ENST00000548938 VSIG1Q86XK7 387 aa14.63□□□□□ -0.07
HDAC7-228ENST00000548938 MKL1Q969V6 931 aa14.63□□□□□ -0.07
HDAC7-228ENST00000548938 CCDC17Q96LX7 622 aa14.63□□□□□ -0.07
HDAC7-228ENST00000548938 STRA6Q9BX79 667 aa14.63□□□□□ -0.07
HDAC7-228ENST00000548938 OSBPL1AQ9BXW6 950 aa14.63□□□□□ -0.07
HDAC7-228ENST00000548938 LRMDAQ9H2I8 198 aa14.63□□□□□ -0.07
HDAC7-228ENST00000548938 CHKBQ9Y259 395 aa14.63□□□□□ -0.07
HDAC7-228ENST00000548938 F5H6K3 240 aa14.63□□□□□ -0.07
HDAC7-228ENST00000548938 PEX11AO75192 247 aa14.63□□□□□ -0.07
HDAC7-228ENST00000548938 LUC7L3O95232 432 aaKnown RBP14.63□□□□□ -0.07
HDAC7-228ENST00000548938 GM2AP17900 193 aa14.63□□□□□ -0.07
HDAC7-228ENST00000548938 GNAZP19086 355 aa14.63□□□□□ -0.07
HDAC7-228ENST00000548938 ADCY8P40145 1251 aa14.63□□□□□ -0.07
HDAC7-228ENST00000548938 BAG6P46379 1132 aa14.63□□□□□ -0.07
HDAC7-228ENST00000548938 POLGP54098 1239 aaPredicted RBP14.63□□□□□ -0.07
HDAC7-228ENST00000548938 CACNB3P54284 484 aa14.63□□□□□ -0.07
HDAC7-228ENST00000548938 RBM26Q5T8P6 1007 aaKnown RBP14.63□□□□□ -0.07
HDAC7-228ENST00000548938 PPP1R21Q6ZMI0 780 aa14.63□□□□□ -0.07
HDAC7-228ENST00000548938 FAM118BQ9BPY3 351 aa14.63□□□□□ -0.07
HDAC7-228ENST00000548938 YIPF3Q9GZM5 350 aa14.63□□□□□ -0.07
HDAC7-228ENST00000548938 RNPEPL1Q9HAU8 725 aa14.63□□□□□ -0.07
HDAC7-228ENST00000548938 NYAP2Q9P242 653 aa14.63□□□□□ -0.07
HDAC7-228ENST00000548938 HAO1Q9UJM8 370 aa14.63□□□□□ -0.07
HDAC7-228ENST00000548938 ENO4A6NNW6 628 aa14.62□□□□□ -0.07
HDAC7-228ENST00000548938 RASA4BC9J798 803 aa14.62□□□□□ -0.07
HDAC7-228ENST00000548938 RASA4O43374 803 aa14.62□□□□□ -0.07
HDAC7-228ENST00000548938 SPAG7O75391 227 aa14.62□□□□□ -0.07
HDAC7-228ENST00000548938 LINGO3P0C6S8 592 aa14.62□□□□□ -0.07
HDAC7-228ENST00000548938 RRM1P23921 792 aa14.62□□□□□ -0.07
HDAC7-228ENST00000548938 MXI1P50539 228 aa14.62□□□□□ -0.07
HDAC7-228ENST00000548938 PRELPP51888 382 aa14.62□□□□□ -0.07
HDAC7-228ENST00000548938 ICA1Q05084 483 aa14.62□□□□□ -0.07
HDAC7-228ENST00000548938 APOBEC3HQ6NTF7 200 aaKnown RBP14.62□□□□□ -0.07
HDAC7-228ENST00000548938 KCTD17Q8N5Z5 321 aa14.62□□□□□ -0.07
HDAC7-228ENST00000548938 GRAMD1AQ96CP6 724 aa14.62□□□□□ -0.07
HDAC7-228ENST00000548938 SAAL1Q96ER3 474 aa14.62□□□□□ -0.07
HDAC7-228ENST00000548938 TRAIPQ9BWF2 469 aa14.62□□□□□ -0.07
HDAC7-228ENST00000548938 DCLK3Q9C098 648 aa14.62□□□□□ -0.07
HDAC7-228ENST00000548938 SLCO1B3Q9NPD5 702 aa14.62□□□□□ -0.07
HDAC7-228ENST00000548938 UVRAGQ9P2Y5 699 aa14.62□□□□□ -0.07
HDAC7-228ENST00000548938 ECE2O60344 883 aa14.62□□□□□ -0.07
HDAC7-228ENST00000548938 GAS7O60861 476 aa14.62□□□□□ -0.07
HDAC7-228ENST00000548938 GAS8O95995 478 aa14.62□□□□□ -0.07
HDAC7-228ENST00000548938 NDUFB10O96000 172 aa14.62□□□□□ -0.07
HDAC7-228ENST00000548938 IL9RQ01113 521 aa14.62□□□□□ -0.07
HDAC7-228ENST00000548938 TCP10Q12799 353 aa14.62□□□□□ -0.07
HDAC7-228ENST00000548938 PPP2R5CQ13362 524 aa14.62□□□□□ -0.07
HDAC7-228ENST00000548938 FBXO41Q8TF61 875 aa14.62□□□□□ -0.07
HDAC7-228ENST00000548938 VTI1AQ96AJ9 217 aa14.62□□□□□ -0.07
HDAC7-228ENST00000548938 ELMO3Q96BJ8 720 aa14.62□□□□□ -0.07
HDAC7-228ENST00000548938 TMEM117Q9H0C3 514 aa14.62□□□□□ -0.07
HDAC7-228ENST00000548938 EURLQ9NYK6 297 aa14.62□□□□□ -0.07
HDAC7-228ENST00000548938 ZFATQ9P243 1243 aa14.62□□□□□ -0.07
HDAC7-228ENST00000548938 ANAPC7Q9UJX3 599 aa14.62□□□□□ -0.07
HDAC7-228ENST00000548938 FAM47DPA6NHR8 397 aa14.61□□□□□ -0.07
HDAC7-228ENST00000548938 A6NHS1 94 aa14.61□□□□□ -0.07
HDAC7-228ENST00000548938 SORBS3O60504 671 aa14.61□□□□□ -0.07
HDAC7-228ENST00000548938 SETDB1Q15047 1291 aa14.61□□□□□ -0.07
HDAC7-228ENST00000548938 AOC3Q16853 763 aa14.61□□□□□ -0.07
HDAC7-228ENST00000548938 PARP6Q2NL67 630 aa14.61□□□□□ -0.07
HDAC7-228ENST00000548938 CERKLQ49MI3 558 aaPredicted RBP14.61□□□□□ -0.07
HDAC7-228ENST00000548938 CYP4F22Q6NT55 531 aa14.61□□□□□ -0.07
HDAC7-228ENST00000548938 HHIPL2Q6UWX4 724 aa14.61□□□□□ -0.07
HDAC7-228ENST00000548938 FAM13CQ8NE31 585 aa14.61□□□□□ -0.07
HDAC7-228ENST00000548938 SLC5A5Q92911 643 aa14.61□□□□□ -0.07
HDAC7-228ENST00000548938 TEKT1Q969V4 418 aa14.61□□□□□ -0.07
HDAC7-228ENST00000548938 NACC1Q96RE7 527 aa14.61□□□□□ -0.07
HDAC7-228ENST00000548938 PLVAPQ9BX97 442 aa14.61□□□□□ -0.07
HDAC7-228ENST00000548938 KIAA1683Q9H0B3 1180 aa14.61□□□□□ -0.07
HDAC7-228ENST00000548938 SMCHD1A6NHR9 2005 aa14.61□□□□□ -0.07
HDAC7-228ENST00000548938 ARHGEF35A5YM69 484 aa14.61□□□□□ -0.07
HDAC7-228ENST00000548938 KIF3CO14782 793 aa14.61□□□□□ -0.07
HDAC7-228ENST00000548938 CALCAP01258 141 aa14.61□□□□□ -0.07
HDAC7-228ENST00000548938 CYP11B1P15538 503 aa14.61□□□□□ -0.07
HDAC7-228ENST00000548938 CALB2P22676 271 aa14.61□□□□□ -0.07
HDAC7-228ENST00000548938 RAD23BP54727 409 aa14.61□□□□□ -0.07
HDAC7-228ENST00000548938 DACT2Q5SW24 774 aa14.61□□□□□ -0.07
HDAC7-228ENST00000548938 STRIP1Q5VSL9 837 aa14.61□□□□□ -0.07
HDAC7-228ENST00000548938 DAB2IPQ5VWQ8 1189 aa14.61□□□□□ -0.07
HDAC7-228ENST00000548938 LXNQ9BS40 222 aa14.61□□□□□ -0.07
HDAC7-228ENST00000548938 UNC45AQ9H3U1 944 aa14.61□□□□□ -0.07
HDAC7-228ENST00000548938 MYH11P35749 1972 aa14.61□□□□□ -0.07
HDAC7-228ENST00000548938 RBBP6Q7Z6E9 1792 aaKnown RBP14.61□□□□□ -0.07
HDAC7-228ENST00000548938 A0A1W2PRG0 241 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms