RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 SMAD3P84022 425 aaKnown RBP22.87■■□□□ 1.25
CACNB3-210ENST00000548874 SPAG1Q07617 926 aa22.87■■□□□ 1.25
CACNB3-210ENST00000548874 RAB30Q15771 203 aa22.87■■□□□ 1.25
CACNB3-210ENST00000548874 LRSAM1Q6UWE0 723 aa22.87■■□□□ 1.25
CACNB3-210ENST00000548874 INTS8Q75QN2 995 aaKnown RBP22.87■■□□□ 1.25
CACNB3-210ENST00000548874 NT5DC4Q86YG4 428 aa22.87■■□□□ 1.25
CACNB3-210ENST00000548874 ZNF280BQ86YH2 543 aa22.87■■□□□ 1.25
CACNB3-210ENST00000548874 EFCAB13Q8IY85 973 aa22.87■■□□□ 1.25
CACNB3-210ENST00000548874 TMC2Q8TDI7 906 aa22.87■■□□□ 1.25
CACNB3-210ENST00000548874 PARD3BQ8TEW8 1205 aa22.87■■□□□ 1.25
CACNB3-210ENST00000548874 MRPL42Q9Y6G3 142 aaKnown RBP22.87■■□□□ 1.25
CACNB3-210ENST00000548874 TDRD15B5MCY1 1934 aaKnown RBP22.86■■□□□ 1.25
CACNB3-210ENST00000548874 DDHD2O94830 711 aa22.86■■□□□ 1.25
CACNB3-210ENST00000548874 MARSP56192 900 aaKnown RBP22.86■■□□□ 1.25
CACNB3-210ENST00000548874 CLDN10P78369 228 aa22.86■■□□□ 1.25
CACNB3-210ENST00000548874 TMEM132DQ14C87 1099 aa22.86■■□□□ 1.25
CACNB3-210ENST00000548874 IRF2BP1Q8IU81 584 aa22.86■■□□□ 1.25
CACNB3-210ENST00000548874 FIBCD1Q8N539 461 aa22.86■■□□□ 1.25
CACNB3-210ENST00000548874 KIF12Q96FN5 646 aa22.86■■□□□ 1.25
CACNB3-210ENST00000548874 THAP9Q9H5L6 903 aa22.86■■□□□ 1.25
CACNB3-210ENST00000548874 NRDE2Q9H7Z3 1164 aa22.86■■□□□ 1.25
CACNB3-210ENST00000548874 SLC38A7Q9NVC3 462 aa22.86■■□□□ 1.25
CACNB3-210ENST00000548874 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.86■■□□□ 1.25
CACNB3-210ENST00000548874 PTPRJQ12913 1337 aa22.85■■□□□ 1.25
CACNB3-210ENST00000548874 LINC01553A4QN01 128 aa22.85■■□□□ 1.25
CACNB3-210ENST00000548874 ARHGEF15O94989 841 aa22.85■■□□□ 1.25
CACNB3-210ENST00000548874 CAVIN2O95810 425 aa22.85■■□□□ 1.25
CACNB3-210ENST00000548874 GNA14O95837 355 aa22.85■■□□□ 1.25
CACNB3-210ENST00000548874 ZNF165P49910 485 aa22.85■■□□□ 1.25
CACNB3-210ENST00000548874 MYL5Q02045 173 aa22.85■■□□□ 1.25
CACNB3-210ENST00000548874 RNASELQ05823 741 aaKnown RBP22.85■■□□□ 1.25
CACNB3-210ENST00000548874 SOX4Q06945 474 aaPredicted RBP22.85■■□□□ 1.25
CACNB3-210ENST00000548874 BFSP1Q12934 665 aa22.85■■□□□ 1.25
CACNB3-210ENST00000548874 TUSC3Q13454 348 aa22.85■■□□□ 1.25
CACNB3-210ENST00000548874 NCAPHQ15003 741 aa22.85■■□□□ 1.25
CACNB3-210ENST00000548874 FRMD5Q7Z6J6 570 aa22.85■■□□□ 1.25
CACNB3-210ENST00000548874 WDR49Q8IV35 697 aa22.85■■□□□ 1.25
CACNB3-210ENST00000548874 COLGALT2Q8IYK4 626 aa22.85■■□□□ 1.25
CACNB3-210ENST00000548874 CLP1Q92989 425 aaKnown RBP22.85■■□□□ 1.25
CACNB3-210ENST00000548874 C18orf25Q96B23 403 aaPredicted RBP22.85■■□□□ 1.25
CACNB3-210ENST00000548874 CCDC127Q96BQ5 260 aa22.85■■□□□ 1.25
CACNB3-210ENST00000548874 CGRRF1Q99675 332 aa22.85■■□□□ 1.25
CACNB3-210ENST00000548874 METTL14Q9HCE5 456 aaKnown RBP22.85■■□□□ 1.25
CACNB3-210ENST00000548874 UBQLN1Q9UMX0 589 aaKnown RBP22.85■■□□□ 1.25
CACNB3-210ENST00000548874 NFE2L3Q9Y4A8 694 aa22.85■■□□□ 1.25
CACNB3-210ENST00000548874 LRRIQ3A6PVS8 624 aaPredicted RBP22.84■■□□□ 1.25
CACNB3-210ENST00000548874 IKBKBO14920 756 aa22.84■■□□□ 1.25
CACNB3-210ENST00000548874 CA3P07451 260 aa22.84■■□□□ 1.25
CACNB3-210ENST00000548874 CYP3A5P20815 502 aa22.84■■□□□ 1.25
CACNB3-210ENST00000548874 VAMP7P51809 220 aa22.84■■□□□ 1.25
CACNB3-210ENST00000548874 TPD52L1Q16890 204 aaPredicted RBP22.84■■□□□ 1.25
CACNB3-210ENST00000548874 C1orf220Q5T0J3 134 aa22.84■■□□□ 1.25
CACNB3-210ENST00000548874 FNBP1Q96RU3 617 aa22.84■■□□□ 1.25
CACNB3-210ENST00000548874 TMEM175Q9BSA9 504 aa22.84■■□□□ 1.25
CACNB3-210ENST00000548874 INTS13Q9NVM9 706 aa22.84■■□□□ 1.25
CACNB3-210ENST00000548874 DNAJB4Q9UDY4 337 aa22.84■■□□□ 1.25
CACNB3-210ENST00000548874 TUBGCP4Q9UGJ1 667 aa22.84■■□□□ 1.25
CACNB3-210ENST00000548874 ARMCX3Q9UH62 379 aaPredicted RBP22.84■■□□□ 1.25
CACNB3-210ENST00000548874 MSRAQ9UJ68 235 aa22.84■■□□□ 1.25
CACNB3-210ENST00000548874 XPOTO43592 962 aaKnown RBP22.83■■□□□ 1.25
CACNB3-210ENST00000548874 DLATP10515 647 aaKnown RBP22.83■■□□□ 1.25
CACNB3-210ENST00000548874 KRT13P13646 458 aa22.83■■□□□ 1.25
CACNB3-210ENST00000548874 DLG4P78352 724 aa22.83■■□□□ 1.25
CACNB3-210ENST00000548874 IQCB1Q15051 598 aa22.83■■□□□ 1.25
CACNB3-210ENST00000548874 CCDC40Q4G0X9 1142 aa22.83■■□□□ 1.25
CACNB3-210ENST00000548874 USP37Q86T82 979 aa22.83■■□□□ 1.25
CACNB3-210ENST00000548874 DHX40Q8IX18 779 aaKnown RBP22.83■■□□□ 1.25
CACNB3-210ENST00000548874 AOPEPQ8N6M6 819 aa22.83■■□□□ 1.25
CACNB3-210ENST00000548874 OR5B17Q8NGF7 314 aa22.83■■□□□ 1.25
CACNB3-210ENST00000548874 FAM193BQ96PV7 902 aaPredicted RBP22.83■■□□□ 1.25
CACNB3-210ENST00000548874 POP1Q99575 1024 aaKnown RBP22.83■■□□□ 1.25
CACNB3-210ENST00000548874 SAMSN1Q9NSI8 373 aaKnown RBP22.83■■□□□ 1.25
CACNB3-210ENST00000548874 LAG3P18627 525 aa22.82■■□□□ 1.24
CACNB3-210ENST00000548874 DNAJB2P25686 324 aa22.82■■□□□ 1.24
CACNB3-210ENST00000548874 LRPAP1P30533 357 aa22.82■■□□□ 1.24
CACNB3-210ENST00000548874 TFAMQ00059 246 aaKnown RBP22.82■■□□□ 1.24
CACNB3-210ENST00000548874 TAP1Q03518 808 aa22.82■■□□□ 1.24
CACNB3-210ENST00000548874 CDKAL1Q5VV42 579 aa22.82■■□□□ 1.24
CACNB3-210ENST00000548874 LMBRD2Q68DH5 695 aaPredicted RBP22.82■■□□□ 1.24
CACNB3-210ENST00000548874 TRIM59Q8IWR1 403 aa22.82■■□□□ 1.24
CACNB3-210ENST00000548874 BEST2Q8NFU1 509 aa22.82■■□□□ 1.24
CACNB3-210ENST00000548874 ZNF516Q92618 1163 aa22.82■■□□□ 1.24
CACNB3-210ENST00000548874 FAM84AQ96KN4 292 aa22.82■■□□□ 1.24
CACNB3-210ENST00000548874 CNOT6LQ96LI5 555 aaKnown RBP22.82■■□□□ 1.24
CACNB3-210ENST00000548874 NKX2-4Q9H2Z4 354 aa22.82■■□□□ 1.24
CACNB3-210ENST00000548874 TSPY26PQ9H489 355 aa22.82■■□□□ 1.24
CACNB3-210ENST00000548874 GOLGA2P5Q9HBQ8 144 aa22.82■■□□□ 1.24
CACNB3-210ENST00000548874 KIAA1671Q9BY89 1806 aa22.82■■□□□ 1.24
CACNB3-210ENST00000548874 ZC3H11AO75152 810 aaKnown RBP eCLIP22.81■■□□□ 1.24
CACNB3-210ENST00000548874 GALTP07902 379 aa22.81■■□□□ 1.24
CACNB3-210ENST00000548874 TRIM49P0CI25 452 aa22.81■■□□□ 1.24
CACNB3-210ENST00000548874 TRIM49CP0CI26 452 aa22.81■■□□□ 1.24
CACNB3-210ENST00000548874 TNNI1P19237 187 aa22.81■■□□□ 1.24
CACNB3-210ENST00000548874 SLC11A1P49279 550 aa22.81■■□□□ 1.24
CACNB3-210ENST00000548874 GUCY2FP51841 1108 aa22.81■■□□□ 1.24
CACNB3-210ENST00000548874 FAM114A1Q8IWE2 563 aa22.81■■□□□ 1.24
CACNB3-210ENST00000548874 TMEM130Q8N3G9 435 aa22.81■■□□□ 1.24
CACNB3-210ENST00000548874 COLGALT1Q8NBJ5 622 aa22.81■■□□□ 1.24
CACNB3-210ENST00000548874 CACTINQ8WUQ7 758 aaKnown RBP22.81■■□□□ 1.24
CACNB3-210ENST00000548874 SLC35C1Q96A29 364 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms