RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 PPP4R4Q6NUP7 873 aa5.15□□□□□ -1.59
PTCH1-216ENST00000548379 GADL1Q6ZQY3 521 aa5.15□□□□□ -1.59
PTCH1-216ENST00000548379 ARHGEF18Q6ZSZ5 1173 aa5.15□□□□□ -1.59
PTCH1-216ENST00000548379 GPRIN1Q7Z2K8 1008 aa5.15□□□□□ -1.59
PTCH1-216ENST00000548379 LRRC56Q8IYG6 542 aaPredicted RBP5.15□□□□□ -1.59
PTCH1-216ENST00000548379 IL17RDQ8NFM7 739 aa5.15□□□□□ -1.59
PTCH1-216ENST00000548379 FBXO18Q8NFZ0 1043 aa5.15□□□□□ -1.59
PTCH1-216ENST00000548379 STON2Q8WXE9 905 aa5.15□□□□□ -1.59
PTCH1-216ENST00000548379 LRTOMTQ8WZ04 291 aa5.15□□□□□ -1.59
PTCH1-216ENST00000548379 NT5C1BQ96P26 610 aa5.15□□□□□ -1.59
PTCH1-216ENST00000548379 RPS6KC1Q96S38 1066 aa5.15□□□□□ -1.59
PTCH1-216ENST00000548379 TCF25Q9BQ70 676 aa5.15□□□□□ -1.59
PTCH1-216ENST00000548379 ZMAT3Q9HA38 289 aaKnown RBP5.15□□□□□ -1.59
PTCH1-216ENST00000548379 SIDT1Q9NXL6 827 aaKnown RBP5.15□□□□□ -1.59
PTCH1-216ENST00000548379 ABCF2Q9UG63 623 aa5.15□□□□□ -1.59
PTCH1-216ENST00000548379 FAM50BQ9Y247 325 aa5.15□□□□□ -1.59
PTCH1-216ENST00000548379 DUSP10Q9Y6W6 482 aa5.15□□□□□ -1.59
PTCH1-216ENST00000548379 RSF1Q96T23 1441 aaPredicted RBP5.14□□□□□ -1.59
PTCH1-216ENST00000548379 DBX1A6NMT0 343 aa5.14□□□□□ -1.59
PTCH1-216ENST00000548379 MYO1FO00160 1098 aa5.14□□□□□ -1.59
PTCH1-216ENST00000548379 NBPF7P0C2Y1 421 aaPredicted RBP5.14□□□□□ -1.59
PTCH1-216ENST00000548379 MYF5P13349 255 aa5.14□□□□□ -1.59
PTCH1-216ENST00000548379 PEX2P28328 305 aa5.14□□□□□ -1.59
PTCH1-216ENST00000548379 TXKP42681 527 aa5.14□□□□□ -1.59
PTCH1-216ENST00000548379 HTR3AP46098 478 aa5.14□□□□□ -1.59
PTCH1-216ENST00000548379 POLD3Q15054 466 aaPredicted RBP5.14□□□□□ -1.59
PTCH1-216ENST00000548379 CSRP2Q16527 193 aa5.14□□□□□ -1.59
PTCH1-216ENST00000548379 EMC10Q5UCC4 262 aa5.14□□□□□ -1.59
PTCH1-216ENST00000548379 SLFN13Q68D06 897 aa5.14□□□□□ -1.59
PTCH1-216ENST00000548379 FAM111BQ6SJ93 734 aa5.14□□□□□ -1.59
PTCH1-216ENST00000548379 DOK3Q7L591 496 aa5.14□□□□□ -1.59
PTCH1-216ENST00000548379 SYT8Q8NBV8 401 aa5.14□□□□□ -1.59
PTCH1-216ENST00000548379 IL31RAQ8NI17 732 aa5.14□□□□□ -1.59
PTCH1-216ENST00000548379 SLC35B2Q8TB61 432 aa5.14□□□□□ -1.59
PTCH1-216ENST00000548379 MTFMTQ96DP5 389 aaKnown RBP5.14□□□□□ -1.59
PTCH1-216ENST00000548379 MRGPRX1Q96LB2 322 aa5.14□□□□□ -1.59
PTCH1-216ENST00000548379 KCNC2Q96PR1 638 aa5.14□□□□□ -1.59
PTCH1-216ENST00000548379 LMF1Q96S06 567 aa5.14□□□□□ -1.59
PTCH1-216ENST00000548379 NDC1Q9BTX1 674 aa5.14□□□□□ -1.59
PTCH1-216ENST00000548379 KRTAP9-9Q9BYP9 154 aa5.14□□□□□ -1.59
PTCH1-216ENST00000548379 KRTAP9-4Q9BYQ2 154 aa5.14□□□□□ -1.59
PTCH1-216ENST00000548379 BTBD1Q9H0C5 482 aa5.14□□□□□ -1.59
PTCH1-216ENST00000548379 C11orf54Q9H0W9 315 aaPredicted RBP5.14□□□□□ -1.59
PTCH1-216ENST00000548379 MRPL46Q9H2W6 279 aaKnown RBP5.14□□□□□ -1.59
PTCH1-216ENST00000548379 KLHL11Q9NVR0 708 aa5.14□□□□□ -1.59
PTCH1-216ENST00000548379 PHTF1Q9UMS5 762 aa5.14□□□□□ -1.59
PTCH1-216ENST00000548379 PCDHGB6Q9Y5F9 930 aa5.14□□□□□ -1.59
PTCH1-216ENST00000548379 ARHGEF11O15085 1522 aa5.13□□□□□ -1.59
PTCH1-216ENST00000548379 A0A1W2PRX2 142 aa5.13□□□□□ -1.59
PTCH1-216ENST00000548379 PRSS29PA6NIE9 313 aa5.13□□□□□ -1.59
PTCH1-216ENST00000548379 B5MCH6 92 aa5.13□□□□□ -1.59
PTCH1-216ENST00000548379 H3BUI4 141 aa5.13□□□□□ -1.59
PTCH1-216ENST00000548379 PHGDHO43175 533 aaKnown RBP5.13□□□□□ -1.59
PTCH1-216ENST00000548379 LAMTOR5O43504 91 aa5.13□□□□□ -1.59
PTCH1-216ENST00000548379 CDC14BO60729 498 aa5.13□□□□□ -1.59
PTCH1-216ENST00000548379 RPS19P39019 145 aaKnown RBP5.13□□□□□ -1.59
PTCH1-216ENST00000548379 ALDH5A1P51649 535 aaPredicted RBP5.13□□□□□ -1.59
PTCH1-216ENST00000548379 ARFIP2P53365 341 aa5.13□□□□□ -1.59
PTCH1-216ENST00000548379 PTH1RQ03431 593 aa5.13□□□□□ -1.59
PTCH1-216ENST00000548379 BIRC2Q13490 618 aa5.13□□□□□ -1.59
PTCH1-216ENST00000548379 BMT2Q1RMZ1 405 aa5.13□□□□□ -1.59
PTCH1-216ENST00000548379 PABPC1LQ4VXU2 614 aaKnown RBP5.13□□□□□ -1.59
PTCH1-216ENST00000548379 CCDC157Q569K6 752 aa5.13□□□□□ -1.59
PTCH1-216ENST00000548379 PPP1R3BQ86XI6 285 aa5.13□□□□□ -1.59
PTCH1-216ENST00000548379 APIPQ96GX9 242 aa5.13□□□□□ -1.59
PTCH1-216ENST00000548379 MYOCQ99972 504 aa5.13□□□□□ -1.59
PTCH1-216ENST00000548379 MRI1Q9BV20 369 aa5.13□□□□□ -1.59
PTCH1-216ENST00000548379 LSM14BQ9BX40 385 aaKnown RBP5.13□□□□□ -1.59
PTCH1-216ENST00000548379 PLA2G12BQ9BX93 195 aa5.13□□□□□ -1.59
PTCH1-216ENST00000548379 ARMT1Q9H993 441 aa5.13□□□□□ -1.59
PTCH1-216ENST00000548379 NCDNQ9UBB6 729 aa5.13□□□□□ -1.59
PTCH1-216ENST00000548379 FEZ2Q9UHY8 353 aaPredicted RBP5.13□□□□□ -1.59
PTCH1-216ENST00000548379 PNPLA7Q6ZV29 1317 aa5.13□□□□□ -1.59
PTCH1-216ENST00000548379 ABCC8Q09428 1581 aa5.12□□□□□ -1.59
PTCH1-216ENST00000548379 WIZO95785 1651 aa5.12□□□□□ -1.59
PTCH1-216ENST00000548379 KRTAP4-8A0A0G2JLE6 195 aa5.12□□□□□ -1.59
PTCH1-216ENST00000548379 CFAP69A5D8W1 941 aa5.12□□□□□ -1.59
PTCH1-216ENST00000548379 BTBD11A6QL63 1104 aa5.12□□□□□ -1.59
PTCH1-216ENST00000548379 TBKBP1A7MCY6 615 aa5.12□□□□□ -1.59
PTCH1-216ENST00000548379 GRM6O15303 877 aa5.12□□□□□ -1.59
PTCH1-216ENST00000548379 SLC43A1O75387 559 aa5.12□□□□□ -1.59
PTCH1-216ENST00000548379 MATN4O95460 622 aa5.12□□□□□ -1.59
PTCH1-216ENST00000548379 CD1AP06126 327 aa5.12□□□□□ -1.59
PTCH1-216ENST00000548379 SNRPA1P09661 255 aaKnown RBP5.12□□□□□ -1.59
PTCH1-216ENST00000548379 SBK3P0C264 359 aa5.12□□□□□ -1.59
PTCH1-216ENST00000548379 NPR1P16066 1061 aa5.12□□□□□ -1.59
PTCH1-216ENST00000548379 ATP5JP18859 108 aa5.12□□□□□ -1.59
PTCH1-216ENST00000548379 SMARCA1P28370 1054 aa5.12□□□□□ -1.59
PTCH1-216ENST00000548379 SLC6A4P31645 630 aa5.12□□□□□ -1.59
PTCH1-216ENST00000548379 FAM214AQ32MH5 1076 aa5.12□□□□□ -1.59
PTCH1-216ENST00000548379 METTL24Q5JXM2 366 aa5.12□□□□□ -1.59
PTCH1-216ENST00000548379 ZFYVE27Q5T4F4 411 aa5.12□□□□□ -1.59
PTCH1-216ENST00000548379 ANKS6Q68DC2 871 aa5.12□□□□□ -1.59
PTCH1-216ENST00000548379 APBB1IPQ7Z5R6 666 aaPredicted RBP5.12□□□□□ -1.59
PTCH1-216ENST00000548379 PHKBQ93100 1093 aa5.12□□□□□ -1.59
PTCH1-216ENST00000548379 GJA10Q969M2 543 aa5.12□□□□□ -1.59
PTCH1-216ENST00000548379 ZNF512Q96ME7 567 aaPredicted RBP5.12□□□□□ -1.59
PTCH1-216ENST00000548379 SSBP3Q9BWW4 388 aaPredicted RBP5.12□□□□□ -1.59
PTCH1-216ENST00000548379 DPH1Q9BZG8 443 aa5.12□□□□□ -1.59
PTCH1-216ENST00000548379 NUP62CLQ9H1M0 184 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms