RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 PLEKHA5Q9HAU0 1116 aa20.42■□□□□ 0.86
PRPF40B-206ENST00000547764 GOLGA2P5Q9HBQ8 144 aa20.42■□□□□ 0.86
PRPF40B-206ENST00000547764 SLC38A7Q9NVC3 462 aa20.42■□□□□ 0.86
PRPF40B-206ENST00000547764 PVALEFA0A1B0GWK0 134 aa20.41■□□□□ 0.86
PRPF40B-206ENST00000547764 TTC26A0AVF1 554 aa20.41■□□□□ 0.86
PRPF40B-206ENST00000547764 LILRB3O75022 631 aa20.41■□□□□ 0.86
PRPF40B-206ENST00000547764 BMP1P13497 986 aa20.41■□□□□ 0.86
PRPF40B-206ENST00000547764 NDUFV1P49821 464 aa20.41■□□□□ 0.86
PRPF40B-206ENST00000547764 CLCNKBP51801 687 aa20.41■□□□□ 0.86
PRPF40B-206ENST00000547764 EHHADHQ08426 723 aa20.41■□□□□ 0.86
PRPF40B-206ENST00000547764 ENOX2Q16206 610 aaKnown RBP20.41■□□□□ 0.86
PRPF40B-206ENST00000547764 FAM26FQ5R3K3 315 aa20.41■□□□□ 0.86
PRPF40B-206ENST00000547764 STXBP4Q6ZWJ1 553 aa20.41■□□□□ 0.86
PRPF40B-206ENST00000547764 SYCP3Q8IZU3 236 aa20.41■□□□□ 0.86
PRPF40B-206ENST00000547764 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.41■□□□□ 0.86
PRPF40B-206ENST00000547764 POMGNT1Q8WZA1 660 aa20.41■□□□□ 0.86
PRPF40B-206ENST00000547764 C18orf25Q96B23 403 aaPredicted RBP20.41■□□□□ 0.86
PRPF40B-206ENST00000547764 UROC1Q96N76 676 aa20.41■□□□□ 0.86
PRPF40B-206ENST00000547764 RPF1Q9H9Y2 349 aaKnown RBP20.41■□□□□ 0.86
PRPF40B-206ENST00000547764 MRPL17Q9NRX2 175 aaKnown RBP20.41■□□□□ 0.86
PRPF40B-206ENST00000547764 CLEC1BQ9P126 229 aa20.41■□□□□ 0.86
PRPF40B-206ENST00000547764 CPSF3Q9UKF6 684 aaKnown RBP20.41■□□□□ 0.86
PRPF40B-206ENST00000547764 AGO2Q9UKV8 859 aaKnown RBP20.41■□□□□ 0.86
PRPF40B-206ENST00000547764 FSD2A1L4K1 749 aa20.4■□□□□ 0.86
PRPF40B-206ENST00000547764 LACTBL1A8MY62 500 aa20.4■□□□□ 0.86
PRPF40B-206ENST00000547764 C2CD2LO14523 706 aa20.4■□□□□ 0.86
PRPF40B-206ENST00000547764 CLASP2O75122 1294 aaKnown RBP20.4■□□□□ 0.86
PRPF40B-206ENST00000547764 URODP06132 367 aa20.4■□□□□ 0.86
PRPF40B-206ENST00000547764 VCANP13611 3396 aa20.4■□□□□ 0.86
PRPF40B-206ENST00000547764 IGFBP6P24592 240 aaPredicted RBP20.4■□□□□ 0.86
PRPF40B-206ENST00000547764 ACOT2P49753 483 aa20.4■□□□□ 0.86
PRPF40B-206ENST00000547764 KCNC3Q14003 757 aa20.4■□□□□ 0.86
PRPF40B-206ENST00000547764 POSTNQ15063 836 aa20.4■□□□□ 0.86
PRPF40B-206ENST00000547764 UPP1Q16831 310 aa20.4■□□□□ 0.86
PRPF40B-206ENST00000547764 KIAA0319Q5VV43 1072 aa20.4■□□□□ 0.86
PRPF40B-206ENST00000547764 DCLRE1AQ6PJP8 1040 aa20.4■□□□□ 0.86
PRPF40B-206ENST00000547764 TMEM87AQ8NBN3 555 aa20.4■□□□□ 0.86
PRPF40B-206ENST00000547764 B3GALT6Q96L58 329 aa20.4■□□□□ 0.86
PRPF40B-206ENST00000547764 TMEM206Q9H813 350 aa20.4■□□□□ 0.86
PRPF40B-206ENST00000547764 CHST7Q9NS84 486 aa20.4■□□□□ 0.86
PRPF40B-206ENST00000547764 BARX2Q9UMQ3 279 aaPredicted RBP20.4■□□□□ 0.86
PRPF40B-206ENST00000547764 SF3B1O75533 1304 aaKnown RBP eCLIP20.39■□□□□ 0.858e-6■■■■■ 107
PRPF40B-206ENST00000547764 KLRC4O43908 158 aa20.39■□□□□ 0.85
PRPF40B-206ENST00000547764 B3GAT3O94766 335 aa20.39■□□□□ 0.85
PRPF40B-206ENST00000547764 ADRB2P07550 413 aa20.39■□□□□ 0.85
PRPF40B-206ENST00000547764 GLUD2P49448 558 aa20.39■□□□□ 0.85
PRPF40B-206ENST00000547764 PPP2R3AQ06190 1150 aa20.39■□□□□ 0.85
PRPF40B-206ENST00000547764 SPAG1Q07617 926 aa20.39■□□□□ 0.85
PRPF40B-206ENST00000547764 CLUL1Q15846 466 aa20.39■□□□□ 0.85
PRPF40B-206ENST00000547764 USP41Q3LFD5 358 aa20.39■□□□□ 0.85
PRPF40B-206ENST00000547764 KIAA1841Q6NSI8 718 aa20.39■□□□□ 0.85
PRPF40B-206ENST00000547764 LLGL2Q6P1M3 1020 aa20.39■□□□□ 0.85
PRPF40B-206ENST00000547764 CD300LGQ6UXG3 332 aa20.39■□□□□ 0.85
PRPF40B-206ENST00000547764 EPM2AIP1Q7L775 607 aaPredicted RBP20.39■□□□□ 0.85
PRPF40B-206ENST00000547764 DDX27Q96GQ7 796 aaKnown RBP20.39■□□□□ 0.85
PRPF40B-206ENST00000547764 SSX2IPQ9Y2D8 614 aa20.39■□□□□ 0.85
PRPF40B-206ENST00000547764 GOLGA6L4A6NEF3 574 aa20.38■□□□□ 0.85
PRPF40B-206ENST00000547764 TMEM189-UBE2V1I3L0A0 370 aa20.38■□□□□ 0.85
PRPF40B-206ENST00000547764 EIF3DO15371 548 aaKnown RBP eCLIP20.38■□□□□ 0.85
PRPF40B-206ENST00000547764 ZNF202O95125 648 aa20.38■□□□□ 0.85
PRPF40B-206ENST00000547764 CNPP09543 421 aaKnown RBP20.38■□□□□ 0.85
PRPF40B-206ENST00000547764 HOXD13P35453 343 aa20.38■□□□□ 0.85
PRPF40B-206ENST00000547764 DSG1Q02413 1049 aa20.38■□□□□ 0.85
PRPF40B-206ENST00000547764 TMEM184AQ6ZMB5 413 aa20.38■□□□□ 0.85
PRPF40B-206ENST00000547764 KRBA2Q6ZNG9 492 aa20.38■□□□□ 0.85
PRPF40B-206ENST00000547764 C3orf58Q8NDZ4 430 aa20.38■□□□□ 0.85
PRPF40B-206ENST00000547764 ZNF507Q8TCN5 953 aa20.38■□□□□ 0.85
PRPF40B-206ENST00000547764 FAM212AQ96EL1 285 aa20.38■□□□□ 0.85
PRPF40B-206ENST00000547764 KIF12Q96FN5 646 aa20.38■□□□□ 0.85
PRPF40B-206ENST00000547764 MSLNLQ96KJ4 702 aa20.38■□□□□ 0.85
PRPF40B-206ENST00000547764 KLHL5Q96PQ7 755 aa20.38■□□□□ 0.85
PRPF40B-206ENST00000547764 EMILIN2Q9BXX0 1053 aa20.38■□□□□ 0.85
PRPF40B-206ENST00000547764 SLC39A2Q9NP94 309 aa20.38■□□□□ 0.85
PRPF40B-206ENST00000547764 HCFC2Q9Y5Z7 792 aa20.38■□□□□ 0.85
PRPF40B-206ENST00000547764 PODXLO00592 558 aa20.37■□□□□ 0.85
PRPF40B-206ENST00000547764 MYL1P05976 194 aa20.37■□□□□ 0.85
PRPF40B-206ENST00000547764 GARTP22102 1010 aa20.37■□□□□ 0.85
PRPF40B-206ENST00000547764 RPL9P32969 192 aaKnown RBP20.37■□□□□ 0.85
PRPF40B-206ENST00000547764 ZBTB6Q15916 424 aa20.37■□□□□ 0.85
PRPF40B-206ENST00000547764 FAM171A1Q5VUB5 890 aa20.37■□□□□ 0.85
PRPF40B-206ENST00000547764 PTCRAQ6ISU1 281 aaPredicted RBP20.37■□□□□ 0.85
PRPF40B-206ENST00000547764 CRELD2Q6UXH1 353 aaPredicted RBP20.37■□□□□ 0.85
PRPF40B-206ENST00000547764 CD302Q8IX05 232 aa20.37■□□□□ 0.85
PRPF40B-206ENST00000547764 ZSWIM2Q8NEG5 633 aa20.37■□□□□ 0.85
PRPF40B-206ENST00000547764 CBWD1Q9BRT8 395 aa20.37■□□□□ 0.85
PRPF40B-206ENST00000547764 COL25A1Q9BXS0 654 aaPredicted RBP20.37■□□□□ 0.85
PRPF40B-206ENST00000547764 TUBGCP4Q9UGJ1 667 aa20.37■□□□□ 0.85
PRPF40B-206ENST00000547764 CD207Q9UJ71 328 aa20.37■□□□□ 0.85
PRPF40B-206ENST00000547764 TCF20Q9UGU0 1960 aaKnown RBP20.37■□□□□ 0.85
PRPF40B-206ENST00000547764 GRXCR2A6NFK2 248 aa20.36■□□□□ 0.85
PRPF40B-206ENST00000547764 SRGAP2BP0DMP2 458 aa20.36■□□□□ 0.85
PRPF40B-206ENST00000547764 KLRC2P26717 231 aa20.36■□□□□ 0.85
PRPF40B-206ENST00000547764 ELAVL2Q12926 359 aaKnown RBP20.36■□□□□ 0.85
PRPF40B-206ENST00000547764 PUS10Q3MIT2 529 aaKnown RBP20.36■□□□□ 0.85
PRPF40B-206ENST00000547764 KMT5BQ4FZB7 885 aa20.36■□□□□ 0.85
PRPF40B-206ENST00000547764 RTP2Q5QGT7 225 aa20.36■□□□□ 0.85
PRPF40B-206ENST00000547764 JADE1Q6IE81 842 aa20.36■□□□□ 0.85
PRPF40B-206ENST00000547764 TMEM130Q8N3G9 435 aa20.36■□□□□ 0.85
PRPF40B-206ENST00000547764 ADAMTS19Q8TE59 1207 aa20.36■□□□□ 0.85
PRPF40B-206ENST00000547764 SLC22A17Q8WUG5 538 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms