RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 PPP2R3AQ06190 1150 aa17.68■□□□□ 0.42
LIMS2-217ENST00000545738 BTG3Q14201 252 aaPredicted RBP17.68■□□□□ 0.42
LIMS2-217ENST00000545738 TMEM173Q86WV6 379 aaPredicted RBP17.68■□□□□ 0.42
LIMS2-217ENST00000545738 DHX40Q8IX18 779 aaKnown RBP17.68■□□□□ 0.42
LIMS2-217ENST00000545738 CMTR2Q8IYT2 770 aaKnown RBP17.68■□□□□ 0.42
LIMS2-217ENST00000545738 ABI1Q8IZP0 508 aa17.68■□□□□ 0.42
LIMS2-217ENST00000545738 OR5B17Q8NGF7 314 aa17.68■□□□□ 0.42
LIMS2-217ENST00000545738 PARD3BQ8TEW8 1205 aa17.68■□□□□ 0.42
LIMS2-217ENST00000545738 ZNF516Q92618 1163 aa17.68■□□□□ 0.42
LIMS2-217ENST00000545738 CCDC127Q96BQ5 260 aa17.68■□□□□ 0.42
LIMS2-217ENST00000545738 PLEKHA5Q9HAU0 1116 aa17.68■□□□□ 0.42
LIMS2-217ENST00000545738 SAMSN1Q9NSI8 373 aaKnown RBP17.68■□□□□ 0.42
LIMS2-217ENST00000545738 LRRIQ3A6PVS8 624 aaPredicted RBP17.67■□□□□ 0.42
LIMS2-217ENST00000545738 CETN3O15182 167 aa17.67■□□□□ 0.42
LIMS2-217ENST00000545738 HOXA2O43364 376 aa17.67■□□□□ 0.42
LIMS2-217ENST00000545738 TRIM49P0CI25 452 aa17.67■□□□□ 0.42
LIMS2-217ENST00000545738 TRIM49CP0CI26 452 aa17.67■□□□□ 0.42
LIMS2-217ENST00000545738 RPL13P26373 211 aaKnown RBP17.67■□□□□ 0.42
LIMS2-217ENST00000545738 PSMD6Q15008 389 aa17.67■□□□□ 0.42
LIMS2-217ENST00000545738 KYAT1Q16773 422 aa17.67■□□□□ 0.42
LIMS2-217ENST00000545738 COLGALT2Q8IYK4 626 aa17.67■□□□□ 0.42
LIMS2-217ENST00000545738 FAM186BQ8IYM0 893 aa17.67■□□□□ 0.42
LIMS2-217ENST00000545738 CXorf38Q8TB03 319 aa17.67■□□□□ 0.42
LIMS2-217ENST00000545738 KIF12Q96FN5 646 aa17.67■□□□□ 0.42
LIMS2-217ENST00000545738 RPS6KC1Q96S38 1066 aa17.67■□□□□ 0.42
LIMS2-217ENST00000545738 DACH1Q9UI36 760 aa17.67■□□□□ 0.42
LIMS2-217ENST00000545738 XIRP2A4UGR9 3374 aa17.67■□□□□ 0.42
LIMS2-217ENST00000545738 SCN1AP35498 2009 aa17.67■□□□□ 0.42
LIMS2-217ENST00000545738 PPEF2O14830 753 aa17.67■□□□□ 0.42
LIMS2-217ENST00000545738 DLATP10515 647 aaKnown RBP17.67■□□□□ 0.42
LIMS2-217ENST00000545738 MCCD1P59942 119 aaPredicted RBP17.67■□□□□ 0.42
LIMS2-217ENST00000545738 GRIK3Q13003 919 aa17.67■□□□□ 0.42
LIMS2-217ENST00000545738 IQCB1Q15051 598 aa17.67■□□□□ 0.42
LIMS2-217ENST00000545738 LRIT3Q3SXY7 679 aa17.67■□□□□ 0.42
LIMS2-217ENST00000545738 LRRC43Q8N309 656 aa17.67■□□□□ 0.42
LIMS2-217ENST00000545738 AOPEPQ8N6M6 819 aa17.67■□□□□ 0.42
LIMS2-217ENST00000545738 C3orf58Q8NDZ4 430 aa17.67■□□□□ 0.42
LIMS2-217ENST00000545738 ENOX1Q8TC92 643 aaKnown RBP17.67■□□□□ 0.42
LIMS2-217ENST00000545738 BCL7CQ8WUZ0 217 aaPredicted RBP17.67■□□□□ 0.42
LIMS2-217ENST00000545738 NKX2-4Q9H2Z4 354 aa17.67■□□□□ 0.42
LIMS2-217ENST00000545738 ASB7Q9H672 318 aa17.67■□□□□ 0.42
LIMS2-217ENST00000545738 KIAA1586Q9HCI6 787 aa17.67■□□□□ 0.42
LIMS2-217ENST00000545738 FRMD4BQ9Y2L6 1034 aa17.67■□□□□ 0.42
LIMS2-217ENST00000545738 NFE2L3Q9Y4A8 694 aa17.67■□□□□ 0.42
LIMS2-217ENST00000545738 PCDHA11Q9Y5I1 949 aa17.67■□□□□ 0.42
LIMS2-217ENST00000545738 A0A1W2PPC1 479 aa17.66■□□□□ 0.42
LIMS2-217ENST00000545738 CASTOR2A6NHX0 329 aa17.66■□□□□ 0.42
LIMS2-217ENST00000545738 NT5C1B-RDH14C9J2C7 533 aa17.66■□□□□ 0.42
LIMS2-217ENST00000545738 TULP1O00294 542 aaPredicted RBP17.66■□□□□ 0.42
LIMS2-217ENST00000545738 ZC3H11AO75152 810 aaKnown RBP eCLIP17.66■□□□□ 0.42
LIMS2-217ENST00000545738 ITGB1P05556 798 aa17.66■□□□□ 0.42
LIMS2-217ENST00000545738 THP07101 528 aa17.66■□□□□ 0.42
LIMS2-217ENST00000545738 DNAJB2P25686 324 aa17.66■□□□□ 0.42
LIMS2-217ENST00000545738 PSMC2P35998 433 aaKnown RBP17.66■□□□□ 0.42
LIMS2-217ENST00000545738 POU5F1Q01860 360 aaKnown RBP17.66■□□□□ 0.42
LIMS2-217ENST00000545738 TAP1Q03518 808 aa17.66■□□□□ 0.42
LIMS2-217ENST00000545738 CT47A1Q5JQC4 288 aaPredicted RBP17.66■□□□□ 0.42
LIMS2-217ENST00000545738 LRSAM1Q6UWE0 723 aa17.66■□□□□ 0.42
LIMS2-217ENST00000545738 FILIP1Q7Z7B0 1213 aa17.66■□□□□ 0.42
LIMS2-217ENST00000545738 CLP1Q92989 425 aaKnown RBP17.66■□□□□ 0.42
LIMS2-217ENST00000545738 CEP63Q96MT8 703 aa17.66■□□□□ 0.42
LIMS2-217ENST00000545738 C17orf80Q9BSJ5 609 aa17.66■□□□□ 0.42
LIMS2-217ENST00000545738 MKNK1Q9BUB5 465 aa17.66■□□□□ 0.42
LIMS2-217ENST00000545738 MTMR12Q9C0I1 747 aa17.66■□□□□ 0.42
LIMS2-217ENST00000545738 PRUNE2Q8WUY3 3088 aa17.65■□□□□ 0.42
LIMS2-217ENST00000545738 PLXNA4Q9HCM2 1894 aa17.65■□□□□ 0.42
LIMS2-217ENST00000545738 MAPK13O15264 365 aa17.65■□□□□ 0.42
LIMS2-217ENST00000545738 SLC16A3O15427 465 aaKnown RBP17.65■□□□□ 0.42
LIMS2-217ENST00000545738 SLC11A1P49279 550 aa17.65■□□□□ 0.42
LIMS2-217ENST00000545738 ZNF165P49910 485 aa17.65■□□□□ 0.42
LIMS2-217ENST00000545738 ZNF445P59923 1031 aa17.65■□□□□ 0.42
LIMS2-217ENST00000545738 CLDN10P78369 228 aa17.65■□□□□ 0.42
LIMS2-217ENST00000545738 PPP3CAQ08209 521 aa17.65■□□□□ 0.42
LIMS2-217ENST00000545738 BFSP1Q12934 665 aa17.65■□□□□ 0.42
LIMS2-217ENST00000545738 SPATA1Q5VX52 437 aa17.65■□□□□ 0.42
LIMS2-217ENST00000545738 CD300LGQ6UXG3 332 aa17.65■□□□□ 0.42
LIMS2-217ENST00000545738 URGCPQ8TCY9 931 aa17.65■□□□□ 0.42
LIMS2-217ENST00000545738 FANCLQ9NW38 375 aa17.65■□□□□ 0.42
LIMS2-217ENST00000545738 C2CD2Q9Y426 696 aa17.65■□□□□ 0.42
LIMS2-217ENST00000545738 MYO9BQ13459 2157 aa17.64■□□□□ 0.41
LIMS2-217ENST00000545738 LRRN2O75325 713 aa17.64■□□□□ 0.41
LIMS2-217ENST00000545738 IL18RAPO95256 599 aa17.64■□□□□ 0.41
LIMS2-217ENST00000545738 CLCNKBP51801 687 aa17.64■□□□□ 0.41
LIMS2-217ENST00000545738 RNASELQ05823 741 aaKnown RBP17.64■□□□□ 0.41
LIMS2-217ENST00000545738 TMEM132DQ14C87 1099 aa17.64■□□□□ 0.41
LIMS2-217ENST00000545738 FIBCD1Q8N539 461 aa17.64■□□□□ 0.41
LIMS2-217ENST00000545738 C1orf127Q8N9H9 656 aa17.64■□□□□ 0.41
LIMS2-217ENST00000545738 LRCH3Q96II8 777 aa17.64■□□□□ 0.41
LIMS2-217ENST00000545738 CNOT6LQ96LI5 555 aaKnown RBP17.64■□□□□ 0.41
LIMS2-217ENST00000545738 CGRRF1Q99675 332 aa17.64■□□□□ 0.41
LIMS2-217ENST00000545738 BPIFA3Q9BQP9 254 aa17.64■□□□□ 0.41
LIMS2-217ENST00000545738 MRPL9Q9BYD2 267 aaKnown RBP17.64■□□□□ 0.41
LIMS2-217ENST00000545738 CBX8Q9HC52 389 aa17.64■□□□□ 0.41
LIMS2-217ENST00000545738 INTS13Q9NVM9 706 aa17.64■□□□□ 0.41
LIMS2-217ENST00000545738 RNF216Q9NWF9 866 aaPredicted RBP17.64■□□□□ 0.41
LIMS2-217ENST00000545738 MARCH5Q9NX47 278 aa17.64■□□□□ 0.41
LIMS2-217ENST00000545738 SIX4Q9UIU6 781 aa17.64■□□□□ 0.41
LIMS2-217ENST00000545738 EPOPA6NHQ4 379 aa17.64■□□□□ 0.41
LIMS2-217ENST00000545738 GALTP07902 379 aa17.64■□□□□ 0.41
LIMS2-217ENST00000545738 EPB41P11171 864 aaKnown RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms