RNA–Protein interactions for RNA: ENST00000544725.5

COPS7A-220, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-220ENST00000544725 SPIRE1Q08AE8 756 aa16.14■□□□□ 0.17
COPS7A-220ENST00000544725 SLC5A9Q2M3M2 681 aa16.14■□□□□ 0.17
COPS7A-220ENST00000544725 ZNF687Q8N1G0 1237 aa16.14■□□□□ 0.17
COPS7A-220ENST00000544725 DDX1Q92499 740 aaKnown RBP16.14■□□□□ 0.17
COPS7A-220ENST00000544725 TRMT61BQ9BVS5 477 aaKnown RBP16.14■□□□□ 0.17
COPS7A-220ENST00000544725 POLR3FQ9H1D9 316 aaPredicted RBP16.14■□□□□ 0.17
COPS7A-220ENST00000544725 SEMA4GQ9NTN9 838 aa16.14■□□□□ 0.17
COPS7A-220ENST00000544725 SNTG2Q9NY99 539 aa16.14■□□□□ 0.17
COPS7A-220ENST00000544725 BACE2Q9Y5Z0 518 aa16.14■□□□□ 0.17
COPS7A-220ENST00000544725 CDY1Q9Y6F8 540 aa16.14■□□□□ 0.17
COPS7A-220ENST00000544725 LRRIQ4A6NIV6 560 aa16.13■□□□□ 0.17
COPS7A-220ENST00000544725 TMEM189-UBE2V1I3L0A0 370 aa16.13■□□□□ 0.17
COPS7A-220ENST00000544725 N4BP3O15049 544 aa16.13■□□□□ 0.17
COPS7A-220ENST00000544725 RECQL4O94761 1208 aa16.13■□□□□ 0.17
COPS7A-220ENST00000544725 GRM2Q14416 872 aa16.13■□□□□ 0.17
COPS7A-220ENST00000544725 NAB2Q15742 525 aa16.13■□□□□ 0.17
COPS7A-220ENST00000544725 CSRP2Q16527 193 aa16.13■□□□□ 0.17
COPS7A-220ENST00000544725 TMEM132AQ24JP5 1023 aa16.13■□□□□ 0.17
COPS7A-220ENST00000544725 PRR23CQ6ZRP0 262 aa16.13■□□□□ 0.17
COPS7A-220ENST00000544725 ANKS3Q6ZW76 656 aa16.13■□□□□ 0.17
COPS7A-220ENST00000544725 POTEDQ86YR6 584 aa16.13■□□□□ 0.17
COPS7A-220ENST00000544725 ZBTB8OSQ8IWT0 167 aa16.13■□□□□ 0.17
COPS7A-220ENST00000544725 FAM3CQ92520 227 aa16.13■□□□□ 0.17
COPS7A-220ENST00000544725 IRF7Q92985 503 aa16.13■□□□□ 0.17
COPS7A-220ENST00000544725 AIFM3Q96NN9 605 aa16.13■□□□□ 0.17
COPS7A-220ENST00000544725 EIF2AK1Q9BQI3 630 aaKnown RBP16.13■□□□□ 0.17
COPS7A-220ENST00000544725 LMAN1LQ9HAT1 526 aa16.13■□□□□ 0.17
COPS7A-220ENST00000544725 ZFP14Q9HCL3 533 aa16.13■□□□□ 0.17
COPS7A-220ENST00000544725 KCNJ14Q9UNX9 436 aa16.13■□□□□ 0.17
COPS7A-220ENST00000544725 CEP295Q9C0D2 2601 aa16.12■□□□□ 0.17
COPS7A-220ENST00000544725 ARHGEF37A1IGU5 675 aa16.12■□□□□ 0.17
COPS7A-220ENST00000544725 ZNF197O14709 1029 aa16.12■□□□□ 0.17
COPS7A-220ENST00000544725 TRAPPC3O43617 180 aa16.12■□□□□ 0.17
COPS7A-220ENST00000544725 B3GAT3O94766 335 aa16.12■□□□□ 0.17
COPS7A-220ENST00000544725 FCARP24071 287 aa16.12■□□□□ 0.17
COPS7A-220ENST00000544725 ELF1P32519 619 aa16.12■□□□□ 0.17
COPS7A-220ENST00000544725 CXCL12P48061 93 aa16.12■□□□□ 0.17
COPS7A-220ENST00000544725 RBM25P49756 843 aaKnown RBP16.12■□□□□ 0.17
COPS7A-220ENST00000544725 RARRES1P49788 294 aa16.12■□□□□ 0.17
COPS7A-220ENST00000544725 SIM2Q14190 667 aaPredicted RBP16.12■□□□□ 0.17
COPS7A-220ENST00000544725 FAM187BQ17R55 369 aa16.12■□□□□ 0.17
COPS7A-220ENST00000544725 PIK3AP1Q6ZUJ8 805 aa16.12■□□□□ 0.17
COPS7A-220ENST00000544725 HSD17B14Q9BPX1 270 aa16.12■□□□□ 0.17
COPS7A-220ENST00000544725 ADPGKQ9BRR6 497 aa16.12■□□□□ 0.17
COPS7A-220ENST00000544725 FZD8Q9H461 694 aa16.12■□□□□ 0.17
COPS7A-220ENST00000544725 TRPV5Q9NQA5 729 aa16.12■□□□□ 0.17
COPS7A-220ENST00000544725 NOTCH4Q99466 2003 aa16.12■□□□□ 0.17
COPS7A-220ENST00000544725 ARID2Q68CP9 1835 aa16.12■□□□□ 0.17
COPS7A-220ENST00000544725 CNOT1A5YKK6 2376 aaKnown RBP16.11■□□□□ 0.17
COPS7A-220ENST00000544725 MICAL2O94851 1124 aa16.11■□□□□ 0.17
COPS7A-220ENST00000544725 XBP1P17861 261 aa16.11■□□□□ 0.17
COPS7A-220ENST00000544725 CNR2P34972 360 aa16.11■□□□□ 0.17
COPS7A-220ENST00000544725 IRX6P78412 446 aaPredicted RBP16.11■□□□□ 0.17
COPS7A-220ENST00000544725 FAM78AQ5JUQ0 283 aa16.11■□□□□ 0.17
COPS7A-220ENST00000544725 CDCA2Q69YH5 1023 aaPredicted RBP16.11■□□□□ 0.17
COPS7A-220ENST00000544725 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.11■□□□□ 0.17
COPS7A-220ENST00000544725 MAP4K3Q8IVH8 894 aa16.11■□□□□ 0.17
COPS7A-220ENST00000544725 ZNF461Q8TAF7 563 aa16.11■□□□□ 0.17
COPS7A-220ENST00000544725 ZNF274Q96GC6 653 aaPredicted RBP16.11■□□□□ 0.17
COPS7A-220ENST00000544725 CORO1BQ9BR76 489 aa16.11■□□□□ 0.17
COPS7A-220ENST00000544725 C2orf40Q9H1Z8 148 aa16.11■□□□□ 0.17
COPS7A-220ENST00000544725 PDZD7Q9H5P4 517 aa16.11■□□□□ 0.17
COPS7A-220ENST00000544725 ZNF334Q9HCZ1 680 aaPredicted RBP16.11■□□□□ 0.17
COPS7A-220ENST00000544725 ANGPTL2Q9UKU9 493 aa16.11■□□□□ 0.17
COPS7A-220ENST00000544725 PIAS3Q9Y6X2 628 aa16.11■□□□□ 0.17
COPS7A-220ENST00000544725 PRRG1O14668 218 aa16.1■□□□□ 0.17
COPS7A-220ENST00000544725 USO1O60763 962 aaKnown RBP16.1■□□□□ 0.17
COPS7A-220ENST00000544725 PSMC3P17980 439 aa16.1■□□□□ 0.17
COPS7A-220ENST00000544725 KCNA4P22459 653 aa16.1■□□□□ 0.17
COPS7A-220ENST00000544725 TKTP29401 623 aaKnown RBP16.1■□□□□ 0.17
COPS7A-220ENST00000544725 GDI1P31150 447 aa16.1■□□□□ 0.17
COPS7A-220ENST00000544725 SATB1Q01826 763 aa16.1■□□□□ 0.17
COPS7A-220ENST00000544725 DMWDQ09019 674 aa16.1■□□□□ 0.17
COPS7A-220ENST00000544725 PRPF4BQ13523 1007 aaKnown RBP16.1■□□□□ 0.17
COPS7A-220ENST00000544725 TOB2Q14106 344 aaPredicted RBP16.1■□□□□ 0.17
COPS7A-220ENST00000544725 PRSS36Q5K4E3 855 aa16.1■□□□□ 0.17
COPS7A-220ENST00000544725 POTEHQ6S545 545 aa16.1■□□□□ 0.17
COPS7A-220ENST00000544725 PDZD4Q76G19 769 aaPredicted RBP16.1■□□□□ 0.17
COPS7A-220ENST00000544725 NOSTRINQ8IVI9 506 aa16.1■□□□□ 0.17
COPS7A-220ENST00000544725 DEPDC1BQ8WUY9 529 aa16.1■□□□□ 0.17
COPS7A-220ENST00000544725 DDX27Q96GQ7 796 aaKnown RBP16.1■□□□□ 0.17
COPS7A-220ENST00000544725 UROC1Q96N76 676 aa16.1■□□□□ 0.17
COPS7A-220ENST00000544725 ASB16Q96NS5 453 aa16.1■□□□□ 0.17
COPS7A-220ENST00000544725 CXCL16Q9H2A7 254 aa16.1■□□□□ 0.17
COPS7A-220ENST00000544725 DAXXQ9UER7 740 aaPredicted RBP16.1■□□□□ 0.17
COPS7A-220ENST00000544725 PCDHA12Q9UN75 941 aa16.1■□□□□ 0.17
COPS7A-220ENST00000544725 XRCC6P12956 609 aaKnown RBP eCLIP16.09■□□□□ 0.17
COPS7A-220ENST00000544725 CLCNKBP51801 687 aa16.09■□□□□ 0.17
COPS7A-220ENST00000544725 ROR1Q01973 937 aa16.09■□□□□ 0.17
COPS7A-220ENST00000544725 MAPK6Q16659 721 aa16.09■□□□□ 0.17
COPS7A-220ENST00000544725 CYP4A22Q5TCH4 519 aa16.09■□□□□ 0.17
COPS7A-220ENST00000544725 IL31Q6EBC2 164 aa16.09■□□□□ 0.17
COPS7A-220ENST00000544725 SLC8B1Q6J4K2 584 aa16.09■□□□□ 0.17
COPS7A-220ENST00000544725 RUFY3Q7L099 469 aa16.09■□□□□ 0.17
COPS7A-220ENST00000544725 MAEAQ7L5Y9 396 aa16.09■□□□□ 0.17
COPS7A-220ENST00000544725 LONP2Q86WA8 852 aa16.09■□□□□ 0.17
COPS7A-220ENST00000544725 SPEM1Q8N4L4 309 aa16.09■□□□□ 0.17
COPS7A-220ENST00000544725 MCPH1Q8NEM0 835 aa16.09■□□□□ 0.17
COPS7A-220ENST00000544725 PIGOQ8TEQ8 1089 aa16.09■□□□□ 0.17
COPS7A-220ENST00000544725 SMARCD2Q92925 531 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms