RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 TMEM192Q8IY95 271 aa21.35■■□□□ 1.01
COPS7A-218ENST00000543939 EPS8L1Q8TE68 723 aa21.35■■□□□ 1.01
COPS7A-218ENST00000543939 SLC20A1Q8WUM9 679 aa21.35■■□□□ 1.01
COPS7A-218ENST00000543939 NOX5Q96PH1 765 aa21.35■■□□□ 1.01
COPS7A-218ENST00000543939 GCOM2Q9BZD3 368 aaPredicted RBP21.35■■□□□ 1.01
COPS7A-218ENST00000543939 RPF1Q9H9Y2 349 aaKnown RBP21.35■■□□□ 1.01
COPS7A-218ENST00000543939 APOBEC3GQ9HC16 384 aaKnown RBP21.35■■□□□ 1.01
COPS7A-218ENST00000543939 NOCTQ9UK39 431 aaKnown RBP21.35■■□□□ 1.01
COPS7A-218ENST00000543939 A0A1B0GUA9 196 aa21.35■■□□□ 1.01
COPS7A-218ENST00000543939 ANO9A1A5B4 782 aa21.35■■□□□ 1.01
COPS7A-218ENST00000543939 TREHO43280 583 aa21.35■■□□□ 1.01
COPS7A-218ENST00000543939 PHACTR2O75167 634 aa21.35■■□□□ 1.01
COPS7A-218ENST00000543939 IL18RAPO95256 599 aa21.35■■□□□ 1.01
COPS7A-218ENST00000543939 SGPL1O95470 568 aa21.35■■□□□ 1.01
COPS7A-218ENST00000543939 CLTAP09496 248 aa21.35■■□□□ 1.01
COPS7A-218ENST00000543939 APLP1P51693 650 aa21.35■■□□□ 1.01
COPS7A-218ENST00000543939 CACNB2Q08289 660 aaPredicted RBP21.35■■□□□ 1.01
COPS7A-218ENST00000543939 TMEM62Q0P6H9 643 aa21.35■■□□□ 1.01
COPS7A-218ENST00000543939 DUOXA2Q1HG44 320 aa21.35■■□□□ 1.01
COPS7A-218ENST00000543939 PAPD7Q5XG87 772 aaKnown RBP21.35■■□□□ 1.01
COPS7A-218ENST00000543939 TRAPPC11Q7Z392 1133 aa21.35■■□□□ 1.01
COPS7A-218ENST00000543939 LRRN4CLQ8ND94 238 aa21.35■■□□□ 1.01
COPS7A-218ENST00000543939 TSC1Q92574 1164 aa21.35■■□□□ 1.01
COPS7A-218ENST00000543939 DHX38Q92620 1227 aaKnown RBP21.35■■□□□ 1.01
COPS7A-218ENST00000543939 MTMR12Q9C0I1 747 aa21.35■■□□□ 1.01
COPS7A-218ENST00000543939 CDHR5Q9HBB8 845 aa21.35■■□□□ 1.01
COPS7A-218ENST00000543939 RNF186Q9NXI6 227 aa21.35■■□□□ 1.01
COPS7A-218ENST00000543939 HDAC6Q9UBN7 1215 aa21.35■■□□□ 1.01
COPS7A-218ENST00000543939 C17orf102A2RUQ5 167 aa21.34■■□□□ 1.01
COPS7A-218ENST00000543939 ATP1A1P05023 1023 aaKnown RBP21.34■■□□□ 1.01
COPS7A-218ENST00000543939 H2AFZP0C0S5 128 aa21.34■■□□□ 1.01
COPS7A-218ENST00000543939 STAG3L1P0CL83 205 aa21.34■■□□□ 1.01
COPS7A-218ENST00000543939 CXCL8P10145 99 aa21.34■■□□□ 1.01
COPS7A-218ENST00000543939 ZNF200P98182 395 aaPredicted RBP21.34■■□□□ 1.01
COPS7A-218ENST00000543939 KYAT1Q16773 422 aa21.34■■□□□ 1.01
COPS7A-218ENST00000543939 GNASQ5JWF2 1037 aa21.34■■□□□ 1.01
COPS7A-218ENST00000543939 SPOPLQ6IQ16 392 aa21.34■■□□□ 1.01
COPS7A-218ENST00000543939 H2AFVQ71UI9 128 aa21.34■■□□□ 1.01
COPS7A-218ENST00000543939 EFCAB13Q8IY85 973 aa21.34■■□□□ 1.01
COPS7A-218ENST00000543939 DNAJB3Q8WWF6 145 aa21.34■■□□□ 1.01
COPS7A-218ENST00000543939 ALS2CR12Q96Q35 445 aa21.34■■□□□ 1.01
COPS7A-218ENST00000543939 MTG1Q9BT17 334 aaPredicted RBP21.34■■□□□ 1.01
COPS7A-218ENST00000543939 CARD6Q9BX69 1037 aa21.34■■□□□ 1.01
COPS7A-218ENST00000543939 ENC1O14682 589 aa21.33■■□□□ 1.01
COPS7A-218ENST00000543939 BUB1O43683 1085 aa21.33■■□□□ 1.01
COPS7A-218ENST00000543939 CHRNB2P17787 502 aa21.33■■□□□ 1.01
COPS7A-218ENST00000543939 SCARA3Q6AZY7 606 aa21.33■■□□□ 1.01
COPS7A-218ENST00000543939 NOP9Q86U38 636 aaKnown RBP21.33■■□□□ 1.01
COPS7A-218ENST00000543939 SLC47A2Q86VL8 602 aa21.33■■□□□ 1.01
COPS7A-218ENST00000543939 DNAAF5Q86Y56 855 aa21.33■■□□□ 1.01
COPS7A-218ENST00000543939 C7orf31Q8N865 590 aa21.33■■□□□ 1.01
COPS7A-218ENST00000543939 ARID3AQ99856 593 aa21.33■■□□□ 1.01
COPS7A-218ENST00000543939 CITO14578 2027 aa21.33■■□□□ 1
COPS7A-218ENST00000543939 MEFVO15553 781 aaPredicted RBP21.32■■□□□ 1
COPS7A-218ENST00000543939 CST3P01034 146 aaPredicted RBP21.32■■□□□ 1
COPS7A-218ENST00000543939 GNAT1P11488 350 aa21.32■■□□□ 1
COPS7A-218ENST00000543939 DARSP14868 501 aaKnown RBP21.32■■□□□ 1
COPS7A-218ENST00000543939 FGFR4P22455 802 aa21.32■■□□□ 1
COPS7A-218ENST00000543939 NOP14P78316 857 aaKnown RBP21.32■■□□□ 1
COPS7A-218ENST00000543939 CUL2Q13617 745 aa21.32■■□□□ 1
COPS7A-218ENST00000543939 PCBP1Q15365 356 aaKnown RBP eCLIP21.32■■□□□ 1
COPS7A-218ENST00000543939 PALB2Q86YC2 1186 aa21.32■■□□□ 1
COPS7A-218ENST00000543939 RPUSD2Q8IZ73 545 aaKnown RBP21.32■■□□□ 1
COPS7A-218ENST00000543939 JRKLQ9Y4A0 524 aa21.32■■□□□ 1
COPS7A-218ENST00000543939 NUB1Q9Y5A7 615 aa21.32■■□□□ 1
COPS7A-218ENST00000543939 PGK1P00558 417 aa21.32■■□□□ 1
COPS7A-218ENST00000543939 ASS1P00966 412 aaKnown RBP21.32■■□□□ 1
COPS7A-218ENST00000543939 RARBP10826 455 aa21.32■■□□□ 1
COPS7A-218ENST00000543939 CYP11B1P15538 503 aa21.32■■□□□ 1
COPS7A-218ENST00000543939 ACO1P21399 889 aaKnown RBP21.32■■□□□ 1
COPS7A-218ENST00000543939 GALCP54803 685 aa21.32■■□□□ 1
COPS7A-218ENST00000543939 TFAMQ00059 246 aaKnown RBP21.32■■□□□ 1
COPS7A-218ENST00000543939 OSMRQ99650 979 aa21.32■■□□□ 1
COPS7A-218ENST00000543939 SPC25Q9HBM1 224 aa21.32■■□□□ 1
COPS7A-218ENST00000543939 ACP6Q9NPH0 428 aa21.32■■□□□ 1
COPS7A-218ENST00000543939 GINS2Q9Y248 185 aa21.32■■□□□ 1
COPS7A-218ENST00000543939 A0A0A6YYK5 440 aaPredicted RBP21.31■■□□□ 1
COPS7A-218ENST00000543939 LACTBL1A8MY62 500 aa21.31■■□□□ 1
COPS7A-218ENST00000543939 TRPA1O75762 1119 aa21.31■■□□□ 1
COPS7A-218ENST00000543939 TNNC2P02585 160 aa21.31■■□□□ 1
COPS7A-218ENST00000543939 TMEM191BP0C7N4 346 aa21.31■■□□□ 1
COPS7A-218ENST00000543939 KRT5P13647 590 aa21.31■■□□□ 1
COPS7A-218ENST00000543939 TBXAS1P24557 533 aaPredicted RBP21.31■■□□□ 1
COPS7A-218ENST00000543939 HOXA11P31270 313 aaPredicted RBP21.31■■□□□ 1
COPS7A-218ENST00000543939 MNS1Q8NEH6 495 aa21.31■■□□□ 1
COPS7A-218ENST00000543939 ANKRD36BP1Q96IX9 119 aa21.31■■□□□ 1
COPS7A-218ENST00000543939 ADPGKQ9BRR6 497 aa21.31■■□□□ 1
COPS7A-218ENST00000543939 SEPT11Q9NVA2 429 aaKnown RBP21.31■■□□□ 1
COPS7A-218ENST00000543939 TAS2R14Q9NYV8 317 aa21.31■■□□□ 1
COPS7A-218ENST00000543939 SRRDQ9UH36 339 aa21.31■■□□□ 1
COPS7A-218ENST00000543939 PCDHGC5Q9Y5F6 944 aa21.31■■□□□ 1
COPS7A-218ENST00000543939 ADAMTS4O75173 837 aa21.3■■□□□ 1
COPS7A-218ENST00000543939 ELNP15502 786 aa21.3■■□□□ 1
COPS7A-218ENST00000543939 CCND3P30281 292 aaPredicted RBP21.3■■□□□ 1
COPS7A-218ENST00000543939 NAP1L1P55209 391 aaKnown RBP21.3■■□□□ 1
COPS7A-218ENST00000543939 MYL6P60660 151 aa21.3■■□□□ 1
COPS7A-218ENST00000543939 FMO1Q01740 532 aa21.3■■□□□ 1
COPS7A-218ENST00000543939 NAA30Q147X3 362 aaPredicted RBP21.3■■□□□ 1
COPS7A-218ENST00000543939 SLC10A6Q3KNW5 377 aa21.3■■□□□ 1
COPS7A-218ENST00000543939 DCAF4L1Q3SXM0 396 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms