RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 PXDNLA1KZ92 1463 aa13.82□□□□□ -0.2
TNC-212ENST00000542877 GOLGA8RI6L899 631 aa13.81□□□□□ -0.2
TNC-212ENST00000542877 KCNN4O15554 427 aa13.81□□□□□ -0.2
TNC-212ENST00000542877 DNAJC6O75061 913 aa13.81□□□□□ -0.2
TNC-212ENST00000542877 MYL3P08590 195 aa13.81□□□□□ -0.2
TNC-212ENST00000542877 ADRA2BP18089 450 aa13.81□□□□□ -0.2
TNC-212ENST00000542877 KCNA4P22459 653 aa13.81□□□□□ -0.2
TNC-212ENST00000542877 ABCE1P61221 599 aaKnown RBP13.81□□□□□ -0.2
TNC-212ENST00000542877 NME3Q13232 169 aa13.81□□□□□ -0.2
TNC-212ENST00000542877 PIGHQ14442 188 aaPredicted RBP13.81□□□□□ -0.2
TNC-212ENST00000542877 ARHGEF26Q96DR7 871 aa13.81□□□□□ -0.2
TNC-212ENST00000542877 REEP2Q9BRK0 252 aa13.81□□□□□ -0.2
TNC-212ENST00000542877 MTO1Q9Y2Z2 717 aaKnown RBP13.81□□□□□ -0.2
TNC-212ENST00000542877 GLI2P10070 1586 aa13.81□□□□□ -0.2
TNC-212ENST00000542877 TRIM66O15016 1216 aa13.81□□□□□ -0.2
TNC-212ENST00000542877 KCNA1Q09470 495 aa13.81□□□□□ -0.2
TNC-212ENST00000542877 PDCD6IPQ8WUM4 868 aaKnown RBP13.81□□□□□ -0.2
TNC-212ENST00000542877 ERP44Q9BS26 406 aa13.81□□□□□ -0.2
TNC-212ENST00000542877 CCT8L1PA6NM43 557 aa13.81□□□□□ -0.2
TNC-212ENST00000542877 GPSM2P81274 684 aa13.81□□□□□ -0.2
TNC-212ENST00000542877 KCTD17Q8N5Z5 321 aa13.81□□□□□ -0.2
TNC-212ENST00000542877 SLC10A4Q96EP9 437 aa13.81□□□□□ -0.2
TNC-212ENST00000542877 EGFL8Q99944 293 aa13.81□□□□□ -0.2
TNC-212ENST00000542877 ZC3H7BQ9UGR2 993 aaKnown RBP13.81□□□□□ -0.2
TNC-212ENST00000542877 KLHL2O95198 593 aa13.81□□□□□ -0.2
TNC-212ENST00000542877 RXRBP28702 533 aa13.81□□□□□ -0.2
TNC-212ENST00000542877 NEK2P51955 445 aa13.81□□□□□ -0.2
TNC-212ENST00000542877 ZNF543Q08ER8 600 aa13.81□□□□□ -0.2
TNC-212ENST00000542877 KRT33BQ14525 404 aa13.81□□□□□ -0.2
TNC-212ENST00000542877 MXD4Q14582 209 aaPredicted RBP13.81□□□□□ -0.2
TNC-212ENST00000542877 LBRQ14739 615 aaKnown RBP13.81□□□□□ -0.2
TNC-212ENST00000542877 ERP27Q96DN0 273 aa13.81□□□□□ -0.2
TNC-212ENST00000542877 C9orf72Q96LT7 481 aa13.81□□□□□ -0.2
TNC-212ENST00000542877 AXIN2Q9Y2T1 843 aa13.81□□□□□ -0.2
TNC-212ENST00000542877 FHOD1Q9Y613 1164 aa13.81□□□□□ -0.2
TNC-212ENST00000542877 PSMD3O43242 534 aa13.8□□□□□ -0.2
TNC-212ENST00000542877 DGAT1O75907 488 aa13.8□□□□□ -0.2
TNC-212ENST00000542877 MYO1DO94832 1006 aa13.8□□□□□ -0.2
TNC-212ENST00000542877 CARSP49589 748 aaKnown RBP13.8□□□□□ -0.2
TNC-212ENST00000542877 ZNF200P98182 395 aaPredicted RBP13.8□□□□□ -0.2
TNC-212ENST00000542877 TRAPPC11Q7Z392 1133 aa13.8□□□□□ -0.2
TNC-212ENST00000542877 LDHDQ86WU2 507 aa13.8□□□□□ -0.2
TNC-212ENST00000542877 RNF135Q8IUD6 432 aa13.8□□□□□ -0.2
TNC-212ENST00000542877 ANKS1AQ92625 1134 aa13.8□□□□□ -0.2
TNC-212ENST00000542877 ERGIC2Q96RQ1 377 aa13.8□□□□□ -0.2
TNC-212ENST00000542877 SARS2Q9NP81 518 aaKnown RBP13.8□□□□□ -0.2
TNC-212ENST00000542877 MTMR4Q9NYA4 1195 aa13.8□□□□□ -0.2
TNC-212ENST00000542877 PKD2L2Q9NZM6 624 aa13.8□□□□□ -0.2
TNC-212ENST00000542877 ARHGEF9O43307 516 aa13.8□□□□□ -0.2
TNC-212ENST00000542877 POTEAQ6S8J7 498 aa13.8□□□□□ -0.2
TNC-212ENST00000542877 NOA1Q8NC60 698 aaKnown RBP13.8□□□□□ -0.2
TNC-212ENST00000542877 OR2W6PQ8NHA6 318 aa13.8□□□□□ -0.2
TNC-212ENST00000542877 PGBD4Q96DM1 585 aa13.8□□□□□ -0.2
TNC-212ENST00000542877 TNIP3Q96KP6 325 aa13.8□□□□□ -0.2
TNC-212ENST00000542877 MKNK1Q9BUB5 465 aa13.8□□□□□ -0.2
TNC-212ENST00000542877 COG4Q9H9E3 785 aa13.8□□□□□ -0.2
TNC-212ENST00000542877 ANGPT2O15123 496 aa13.8□□□□□ -0.2
TNC-212ENST00000542877 SYF2O95926 243 aaKnown RBP13.8□□□□□ -0.2
TNC-212ENST00000542877 SERPINB10P48595 397 aa13.8□□□□□ -0.2
TNC-212ENST00000542877 FOXD4Q12950 439 aaPredicted RBP13.8□□□□□ -0.2
TNC-212ENST00000542877 PTGISQ16647 500 aa13.8□□□□□ -0.2
TNC-212ENST00000542877 UGP2Q16851 508 aa13.8□□□□□ -0.2
TNC-212ENST00000542877 RNF219Q5W0B1 726 aaPredicted RBP13.8□□□□□ -0.2
TNC-212ENST00000542877 SLC30A5Q8TAD4 765 aa13.8□□□□□ -0.2
TNC-212ENST00000542877 DTX3LQ8TDB6 740 aa13.8□□□□□ -0.2
TNC-212ENST00000542877 TRIM54Q9BYV2 358 aa13.8□□□□□ -0.2
TNC-212ENST00000542877 TMEM120BA0PK00 339 aa13.8□□□□□ -0.2
TNC-212ENST00000542877 ATP9BO43861 1147 aa13.8□□□□□ -0.2
TNC-212ENST00000542877 FDPSP14324 419 aaKnown RBP13.8□□□□□ -0.2
TNC-212ENST00000542877 KCNA2P16389 499 aa13.8□□□□□ -0.2
TNC-212ENST00000542877 CENPCQ03188 943 aa13.8□□□□□ -0.2
TNC-212ENST00000542877 FAM182BQ5T319 152 aa13.8□□□□□ -0.2
TNC-212ENST00000542877 CYFIP1Q7L576 1253 aa13.8□□□□□ -0.2
TNC-212ENST00000542877 C4orf33Q8N1A6 199 aa13.8□□□□□ -0.2
TNC-212ENST00000542877 PPHLN1Q8NEY8 458 aaKnown RBP13.8□□□□□ -0.2
TNC-212ENST00000542877 ENGASEQ8NFI3 743 aa13.8□□□□□ -0.2
TNC-212ENST00000542877 CMTM5Q96DZ9 223 aa13.8□□□□□ -0.2
TNC-212ENST00000542877 RMDN2Q96LZ7 410 aa13.8□□□□□ -0.2
TNC-212ENST00000542877 TRIM45Q9H8W5 580 aaPredicted RBP13.8□□□□□ -0.2
TNC-212ENST00000542877 L2HGDHQ9H9P8 463 aa13.8□□□□□ -0.2
TNC-212ENST00000542877 CLTCL1P53675 1640 aa13.8□□□□□ -0.2
TNC-212ENST00000542877 USP31Q70CQ4 1352 aa13.8□□□□□ -0.2
TNC-212ENST00000542877 HSD17B4P51659 736 aa13.8□□□□□ -0.2
TNC-212ENST00000542877 SESN2P58004 480 aaPredicted RBP13.8□□□□□ -0.2
TNC-212ENST00000542877 ANTXR2P58335 489 aa13.8□□□□□ -0.2
TNC-212ENST00000542877 CDK17Q00537 523 aa13.8□□□□□ -0.2
TNC-212ENST00000542877 C16orf89Q6UX73 402 aa13.8□□□□□ -0.2
TNC-212ENST00000542877 WRNIP1Q96S55 665 aa13.8□□□□□ -0.2
TNC-212ENST00000542877 EPAS1Q99814 870 aa13.8□□□□□ -0.2
TNC-212ENST00000542877 TMEM117Q9H0C3 514 aa13.8□□□□□ -0.2
TNC-212ENST00000542877 XPO7Q9UIA9 1087 aaKnown RBP13.8□□□□□ -0.2
TNC-212ENST00000542877 CROCC2H7BZ55 1655 aa13.79□□□□□ -0.2
TNC-212ENST00000542877 NBPF26B4DH59 902 aa13.79□□□□□ -0.2
TNC-212ENST00000542877 EIF3DO15371 548 aaKnown RBP eCLIP13.79□□□□□ -0.2
TNC-212ENST00000542877 P4HA2O15460 535 aa13.79□□□□□ -0.2
TNC-212ENST00000542877 SNRPFP62306 86 aaKnown RBP13.79□□□□□ -0.2
TNC-212ENST00000542877 NKX1-1Q15270 411 aaPredicted RBP13.79□□□□□ -0.2
TNC-212ENST00000542877 DAB2IPQ5VWQ8 1189 aa13.79□□□□□ -0.2
TNC-212ENST00000542877 EP400NLQ6ZTU2 488 aa13.79□□□□□ -0.2
TNC-212ENST00000542877 NBPF15Q8N660 670 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms