RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 SFMBT2Q5VUG0 894 aa14.33□□□□□ -0.12
CHFR-221ENST00000542714 TOGARAM2Q6ZUX3 1019 aa14.33□□□□□ -0.12
CHFR-221ENST00000542714 APBB1IPQ7Z5R6 666 aaPredicted RBP14.33□□□□□ -0.12
CHFR-221ENST00000542714 FAM126BQ8IXS8 530 aa14.33□□□□□ -0.12
CHFR-221ENST00000542714 HELQQ8TDG4 1101 aa14.33□□□□□ -0.12
CHFR-221ENST00000542714 KAT5Q92993 513 aa14.33□□□□□ -0.12
CHFR-221ENST00000542714 KREMEN1Q96MU8 473 aa14.33□□□□□ -0.12
CHFR-221ENST00000542714 ACAP3Q96P50 834 aa14.33□□□□□ -0.12
CHFR-221ENST00000542714 PI4K2AQ9BTU6 479 aa14.33□□□□□ -0.12
CHFR-221ENST00000542714 MTMR12Q9C0I1 747 aa14.33□□□□□ -0.12
CHFR-221ENST00000542714 NXF3Q9H4D5 531 aaKnown RBP14.33□□□□□ -0.12
CHFR-221ENST00000542714 KCND1Q9NSA2 647 aa14.33□□□□□ -0.12
CHFR-221ENST00000542714 SNTG2Q9NY99 539 aa14.33□□□□□ -0.12
CHFR-221ENST00000542714 AIPL1Q9NZN9 384 aa14.33□□□□□ -0.12
CHFR-221ENST00000542714 ARHGAP20Q9P2F6 1191 aa14.33□□□□□ -0.12
CHFR-221ENST00000542714 ST3GAL5Q9UNP4 418 aa14.33□□□□□ -0.12
CHFR-221ENST00000542714 F8VZ95 297 aa14.32□□□□□ -0.12
CHFR-221ENST00000542714 CD4P01730 458 aa14.32□□□□□ -0.12
CHFR-221ENST00000542714 GHRP10912 638 aa14.32□□□□□ -0.12
CHFR-221ENST00000542714 RFX1P22670 979 aa14.32□□□□□ -0.12
CHFR-221ENST00000542714 CD52P31358 61 aa14.32□□□□□ -0.12
CHFR-221ENST00000542714 CTCFP49711 727 aaPredicted RBP14.32□□□□□ -0.12
CHFR-221ENST00000542714 BIRC3Q13489 604 aa14.32□□□□□ -0.12
CHFR-221ENST00000542714 DRAP1Q14919 205 aaPredicted RBP14.32□□□□□ -0.12
CHFR-221ENST00000542714 TSR1Q2NL82 804 aaKnown RBP14.32□□□□□ -0.12
CHFR-221ENST00000542714 JADE1Q6IE81 842 aa14.32□□□□□ -0.12
CHFR-221ENST00000542714 TRAPPC11Q7Z392 1133 aa14.32□□□□□ -0.12
CHFR-221ENST00000542714 IRF2BP2Q7Z5L9 587 aa14.32□□□□□ -0.12
CHFR-221ENST00000542714 SMG8Q8ND04 991 aaKnown RBP14.32□□□□□ -0.12
CHFR-221ENST00000542714 U2AF1L4Q8WU68 220 aaKnown RBP14.32□□□□□ -0.12
CHFR-221ENST00000542714 TATDN2Q93075 761 aa14.32□□□□□ -0.12
CHFR-221ENST00000542714 SNX27Q96L92 541 aa14.32□□□□□ -0.12
CHFR-221ENST00000542714 NT5C1BQ96P26 610 aa14.32□□□□□ -0.12
CHFR-221ENST00000542714 CCDC94Q9BW85 323 aaPredicted RBP14.32□□□□□ -0.12
CHFR-221ENST00000542714 SEZ6LQ9BYH1 1024 aa14.32□□□□□ -0.12
CHFR-221ENST00000542714 STK33Q9BYT3 514 aa14.32□□□□□ -0.12
CHFR-221ENST00000542714 NUCKS1Q9H1E3 243 aaKnown RBP14.32□□□□□ -0.12
CHFR-221ENST00000542714 ASB7Q9H672 318 aa14.32□□□□□ -0.12
CHFR-221ENST00000542714 APOBEC3GQ9HC16 384 aaKnown RBP14.32□□□□□ -0.12
CHFR-221ENST00000542714 UBE2TQ9NPD8 197 aaPredicted RBP14.32□□□□□ -0.12
CHFR-221ENST00000542714 RRAGDQ9NQL2 400 aaPredicted RBP14.32□□□□□ -0.12
CHFR-221ENST00000542714 HES2Q9Y543 173 aa14.32□□□□□ -0.12
CHFR-221ENST00000542714 SCN5AQ14524 2016 aa14.31□□□□□ -0.12
CHFR-221ENST00000542714 ZC3H11AO75152 810 aaKnown RBP eCLIP14.31□□□□□ -0.12
CHFR-221ENST00000542714 RECQL4O94761 1208 aa14.31□□□□□ -0.12
CHFR-221ENST00000542714 SGPL1O95470 568 aa14.31□□□□□ -0.12
CHFR-221ENST00000542714 TFAMQ00059 246 aaKnown RBP14.31□□□□□ -0.12
CHFR-221ENST00000542714 DSC3Q14574 896 aa14.31□□□□□ -0.12
CHFR-221ENST00000542714 MBTPS1Q14703 1052 aa14.31□□□□□ -0.12
CHFR-221ENST00000542714 ASIC2Q16515 512 aa14.31□□□□□ -0.12
CHFR-221ENST00000542714 ARHGAP44Q17R89 818 aa14.31□□□□□ -0.12
CHFR-221ENST00000542714 DUOXA2Q1HG44 320 aa14.31□□□□□ -0.12
CHFR-221ENST00000542714 SPOPLQ6IQ16 392 aa14.31□□□□□ -0.12
CHFR-221ENST00000542714 ALKAL1Q6UXT8 129 aa14.31□□□□□ -0.12
CHFR-221ENST00000542714 CCAR2Q8N163 923 aaKnown RBP14.31□□□□□ -0.12
CHFR-221ENST00000542714 OLIG1Q8TAK6 271 aa14.31□□□□□ -0.12
CHFR-221ENST00000542714 CXorf38Q8TB03 319 aa14.31□□□□□ -0.12
CHFR-221ENST00000542714 SPAG5Q96R06 1193 aa14.31□□□□□ -0.12
CHFR-221ENST00000542714 DESI2Q9BSY9 194 aa14.31□□□□□ -0.12
CHFR-221ENST00000542714 RNF39Q9H2S5 420 aa14.31□□□□□ -0.12
CHFR-221ENST00000542714 SPTLC3Q9NUV7 552 aa14.31□□□□□ -0.12
CHFR-221ENST00000542714 ZNHIT6Q9NWK9 470 aaKnown RBP14.31□□□□□ -0.12
CHFR-221ENST00000542714 SIX4Q9UIU6 781 aa14.31□□□□□ -0.12
CHFR-221ENST00000542714 PADI3Q9ULW8 664 aa14.31□□□□□ -0.12
CHFR-221ENST00000542714 REXO2Q9Y3B8 237 aaKnown RBP14.31□□□□□ -0.12
CHFR-221ENST00000542714 IPPQ9Y573 584 aa14.31□□□□□ -0.12
CHFR-221ENST00000542714 UMODL1Q5DID0 1318 aa14.31□□□□□ -0.12
CHFR-221ENST00000542714 CENPFP49454 3210 aa14.3□□□□□ -0.12
CHFR-221ENST00000542714 MGEA5O60502 916 aa14.3□□□□□ -0.12
CHFR-221ENST00000542714 CST3P01034 146 aaPredicted RBP14.3□□□□□ -0.12
CHFR-221ENST00000542714 SERPING1P05155 500 aa14.3□□□□□ -0.12
CHFR-221ENST00000542714 TMEM191BP0C7N4 346 aa14.3□□□□□ -0.12
CHFR-221ENST00000542714 SOX5P35711 763 aa14.3□□□□□ -0.12
CHFR-221ENST00000542714 EIF4A3P38919 411 aaKnown RBP14.3□□□□□ -0.12
CHFR-221ENST00000542714 STAT1P42224 750 aa14.3□□□□□ -0.12
CHFR-221ENST00000542714 MAPK8IP2Q13387 824 aaPredicted RBP14.3□□□□□ -0.12
CHFR-221ENST00000542714 NCOA4Q13772 614 aa14.3□□□□□ -0.12
CHFR-221ENST00000542714 PKN2Q16513 984 aaKnown RBP14.3□□□□□ -0.12
CHFR-221ENST00000542714 ASTE1Q2TB18 679 aaPredicted RBP14.3□□□□□ -0.12
CHFR-221ENST00000542714 C1orf127Q8N9H9 656 aa14.3□□□□□ -0.12
CHFR-221ENST00000542714 ACRBPQ8NEB7 543 aa14.3□□□□□ -0.12
CHFR-221ENST00000542714 ANKRD36BP1Q96IX9 119 aa14.3□□□□□ -0.12
CHFR-221ENST00000542714 ZMAT2Q96NC0 199 aaKnown RBP14.3□□□□□ -0.12
CHFR-221ENST00000542714 NHEJ1Q9H9Q4 299 aaPredicted RBP14.3□□□□□ -0.12
CHFR-221ENST00000542714 PLEKHA5Q9HAU0 1116 aa14.3□□□□□ -0.12
CHFR-221ENST00000542714 CHST12Q9NRB3 414 aa14.3□□□□□ -0.12
CHFR-221ENST00000542714 PPP2R2CQ9Y2T4 447 aa14.3□□□□□ -0.12
CHFR-221ENST00000542714 C2CD2Q9Y426 696 aa14.3□□□□□ -0.12
CHFR-221ENST00000542714 ADGRG1Q9Y653 693 aa14.3□□□□□ -0.12
CHFR-221ENST00000542714 EPN1Q9Y6I3 576 aaPredicted RBP14.3□□□□□ -0.12
CHFR-221ENST00000542714 SQORQ9Y6N5 450 aa14.3□□□□□ -0.12
CHFR-221ENST00000542714 SCN1AP35498 2009 aa14.29□□□□□ -0.12
CHFR-221ENST00000542714 FOXN3O00409 490 aaPredicted RBP14.29□□□□□ -0.12
CHFR-221ENST00000542714 GPR182O15218 404 aa14.29□□□□□ -0.12
CHFR-221ENST00000542714 PHACTR2O75167 634 aa14.29□□□□□ -0.12
CHFR-221ENST00000542714 GFPT2O94808 682 aa14.29□□□□□ -0.12
CHFR-221ENST00000542714 NDUFA10O95299 355 aa14.29□□□□□ -0.12
CHFR-221ENST00000542714 ASS1P00966 412 aaKnown RBP14.29□□□□□ -0.12
CHFR-221ENST00000542714 TNNC2P02585 160 aa14.29□□□□□ -0.12
CHFR-221ENST00000542714 TFRCP02786 760 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms