RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 RAB33AQ14088 237 aa15.51■□□□□ 0.07
SNHG1-213ENST00000540725 ZNF568Q3ZCX4 644 aa15.51■□□□□ 0.07
SNHG1-213ENST00000540725 AXDND1Q5T1B0 1012 aaPredicted RBP15.51■□□□□ 0.07
SNHG1-213ENST00000540725 CD300LGQ6UXG3 332 aa15.51■□□□□ 0.07
SNHG1-213ENST00000540725 FRMD5Q7Z6J6 570 aa15.51■□□□□ 0.07
SNHG1-213ENST00000540725 ST13P5Q8NFI4 369 aaPredicted RBP15.51■□□□□ 0.07
SNHG1-213ENST00000540725 SLC7A14Q8TBB6 771 aa15.51■□□□□ 0.07
SNHG1-213ENST00000540725 GPR152Q8TDT2 470 aa15.51■□□□□ 0.07
SNHG1-213ENST00000540725 ACO2Q99798 780 aaKnown RBP15.51■□□□□ 0.07
SNHG1-213ENST00000540725 RUSC1Q9BVN2 902 aa15.51■□□□□ 0.07
SNHG1-213ENST00000540725 CCDC94Q9BW85 323 aaPredicted RBP15.51■□□□□ 0.07
SNHG1-213ENST00000540725 TBC1D17Q9HA65 648 aa15.51■□□□□ 0.07
SNHG1-213ENST00000540725 TOPORSQ9NS56 1045 aaPredicted RBP15.51■□□□□ 0.07
SNHG1-213ENST00000540725 MTRRQ9UBK8 725 aa15.51■□□□□ 0.07
SNHG1-213ENST00000540725 CDH7Q9ULB5 785 aa15.51■□□□□ 0.07
SNHG1-213ENST00000540725 POLIQ9UNA4 740 aa15.51■□□□□ 0.07
SNHG1-213ENST00000540725 FANCMQ8IYD8 2048 aa15.51■□□□□ 0.07
SNHG1-213ENST00000540725 SMIM28A0A1B0GU29 152 aa15.5■□□□□ 0.07
SNHG1-213ENST00000540725 TKTP29401 623 aaKnown RBP15.5■□□□□ 0.07
SNHG1-213ENST00000540725 CDC25AP30304 524 aa15.5■□□□□ 0.07
SNHG1-213ENST00000540725 PRPHP41219 470 aa15.5■□□□□ 0.07
SNHG1-213ENST00000540725 YARSP54577 528 aaKnown RBP15.5■□□□□ 0.07
SNHG1-213ENST00000540725 MAPK7Q13164 816 aa15.5■□□□□ 0.07
SNHG1-213ENST00000540725 DMP1Q13316 513 aaPredicted RBP15.5■□□□□ 0.07
SNHG1-213ENST00000540725 ANGPT1Q15389 498 aa15.5■□□□□ 0.07
SNHG1-213ENST00000540725 IL17AQ16552 155 aa15.5■□□□□ 0.07
SNHG1-213ENST00000540725 UPP1Q16831 310 aa15.5■□□□□ 0.07
SNHG1-213ENST00000540725 TAS1R3Q7RTX0 852 aa15.5■□□□□ 0.07
SNHG1-213ENST00000540725 KCNK18Q7Z418 384 aa15.5■□□□□ 0.07
SNHG1-213ENST00000540725 C3orf58Q8NDZ4 430 aa15.5■□□□□ 0.07
SNHG1-213ENST00000540725 DRC1Q96MC2 740 aa15.5■□□□□ 0.07
SNHG1-213ENST00000540725 TARS2Q9BW92 718 aaKnown RBP15.5■□□□□ 0.07
SNHG1-213ENST00000540725 MRPL4Q9BYD3 311 aaKnown RBP15.5■□□□□ 0.07
SNHG1-213ENST00000540725 TMEM134Q9H6X4 195 aa15.5■□□□□ 0.07
SNHG1-213ENST00000540725 PTPRHQ9HD43 1115 aa15.5■□□□□ 0.07
SNHG1-213ENST00000540725 KMT5AQ9NQR1 393 aa15.5■□□□□ 0.07
SNHG1-213ENST00000540725 SLC2A4RGQ9NR83 387 aa15.5■□□□□ 0.07
SNHG1-213ENST00000540725 ARHGAP28Q9P2N2 729 aa15.5■□□□□ 0.07
SNHG1-213ENST00000540725 CDY1Q9Y6F8 540 aa15.5■□□□□ 0.07
SNHG1-213ENST00000540725 I3L4J1 428 aa15.49■□□□□ 0.07
SNHG1-213ENST00000540725 TRAPPC3O43617 180 aa15.49■□□□□ 0.07
SNHG1-213ENST00000540725 POU2F2P09086 479 aa15.49■□□□□ 0.07
SNHG1-213ENST00000540725 BRCC3P46736 316 aa15.49■□□□□ 0.07
SNHG1-213ENST00000540725 OSTNP61366 133 aa15.49■□□□□ 0.07
SNHG1-213ENST00000540725 SOX4Q06945 474 aaPredicted RBP15.49■□□□□ 0.07
SNHG1-213ENST00000540725 UVSSAQ2YD98 709 aa15.49■□□□□ 0.07
SNHG1-213ENST00000540725 XKR4Q5GH76 650 aa15.49■□□□□ 0.07
SNHG1-213ENST00000540725 RINT1Q6NUQ1 792 aa15.49■□□□□ 0.07
SNHG1-213ENST00000540725 ALKAL1Q6UXT8 129 aa15.49■□□□□ 0.07
SNHG1-213ENST00000540725 RSPO2Q6UXX9 243 aaPredicted RBP15.49■□□□□ 0.07
SNHG1-213ENST00000540725 DTHD1Q6ZMT9 781 aa15.49■□□□□ 0.07
SNHG1-213ENST00000540725 ANKS3Q6ZW76 656 aa15.49■□□□□ 0.07
SNHG1-213ENST00000540725 C1orf186Q6ZWK4 172 aa15.49■□□□□ 0.07
SNHG1-213ENST00000540725 FGF13Q92913 245 aa15.49■□□□□ 0.07
SNHG1-213ENST00000540725 FGF14Q92915 247 aa15.49■□□□□ 0.07
SNHG1-213ENST00000540725 NKD2Q969F2 451 aaPredicted RBP15.49■□□□□ 0.07
SNHG1-213ENST00000540725 DDX27Q96GQ7 796 aaKnown RBP15.49■□□□□ 0.07
SNHG1-213ENST00000540725 MMTAG2Q9BU76 263 aaKnown RBP15.49■□□□□ 0.07
SNHG1-213ENST00000540725 RPP25Q9BUL9 199 aaKnown RBP15.49■□□□□ 0.07
SNHG1-213ENST00000540725 ARHGEF3Q9NR81 526 aa15.49■□□□□ 0.07
SNHG1-213ENST00000540725 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.49■□□□□ 0.07
SNHG1-213ENST00000540725 BACE2Q9Y5Z0 518 aa15.49■□□□□ 0.07
SNHG1-213ENST00000540725 F5P12259 2224 aa15.49■□□□□ 0.07
SNHG1-213ENST00000540725 OTOGLQ3ZCN5 2332 aa15.49■□□□□ 0.07
SNHG1-213ENST00000540725 MCF2P10911 925 aa15.49■□□□□ 0.07
SNHG1-213ENST00000540725 C8orf34Q49A92 452 aa15.49■□□□□ 0.07
SNHG1-213ENST00000540725 PHLDB3Q6NSJ2 640 aa15.49■□□□□ 0.07
SNHG1-213ENST00000540725 PARM1Q6UWI2 310 aa15.49■□□□□ 0.07
SNHG1-213ENST00000540725 ITFG1Q8TB96 612 aa15.49■□□□□ 0.07
SNHG1-213ENST00000540725 SNX27Q96L92 541 aa15.49■□□□□ 0.07
SNHG1-213ENST00000540725 TCHPQ9BT92 498 aa15.49■□□□□ 0.07
SNHG1-213ENST00000540725 C17orf75Q9HAS0 396 aa15.49■□□□□ 0.07
SNHG1-213ENST00000540725 SLC38A7Q9NVC3 462 aa15.49■□□□□ 0.07
SNHG1-213ENST00000540725 HCFC1R1Q9NWW0 138 aa15.49■□□□□ 0.07
SNHG1-213ENST00000540725 KIF3AQ9Y496 699 aa15.49■□□□□ 0.07
SNHG1-213ENST00000540725 RBM19Q9Y4C8 960 aaKnown RBP15.49■□□□□ 0.07
SNHG1-213ENST00000540725 PODXLO00592 558 aa15.48■□□□□ 0.07
SNHG1-213ENST00000540725 ABLIM1O14639 778 aa15.48■□□□□ 0.07
SNHG1-213ENST00000540725 SLC16A4O15374 487 aa15.48■□□□□ 0.07
SNHG1-213ENST00000540725 PROZP22891 400 aa15.48■□□□□ 0.07
SNHG1-213ENST00000540725 ZRSR1Q15695 479 aaKnown RBP15.48■□□□□ 0.07
SNHG1-213ENST00000540725 PABPC1LQ4VXU2 614 aaKnown RBP15.48■□□□□ 0.07
SNHG1-213ENST00000540725 MCTP1Q6DN14 999 aa15.48■□□□□ 0.07
SNHG1-213ENST00000540725 MPZL3Q6UWV2 235 aa15.48■□□□□ 0.07
SNHG1-213ENST00000540725 MTSS1LQ765P7 747 aa15.48■□□□□ 0.07
SNHG1-213ENST00000540725 RTL10Q7L3V2 364 aa15.48■□□□□ 0.07
SNHG1-213ENST00000540725 ZMAT2Q96NC0 199 aaKnown RBP15.48■□□□□ 0.07
SNHG1-213ENST00000540725 ACAP3Q96P50 834 aa15.48■□□□□ 0.07
SNHG1-213ENST00000540725 TIPINQ9BVW5 301 aa15.48■□□□□ 0.07
SNHG1-213ENST00000540725 SFI1A8K8P3 1242 aa15.47■□□□□ 0.07
SNHG1-213ENST00000540725 HARSP12081 509 aaKnown RBP15.47■□□□□ 0.07
SNHG1-213ENST00000540725 KCNE1P15382 129 aa15.47■□□□□ 0.07
SNHG1-213ENST00000540725 GUCY2CP25092 1073 aa15.47■□□□□ 0.07
SNHG1-213ENST00000540725 GPC5P78333 572 aa15.47■□□□□ 0.07
SNHG1-213ENST00000540725 ATP2C1P98194 919 aaPredicted RBP15.47■□□□□ 0.07
SNHG1-213ENST00000540725 ROR1Q01973 937 aa15.47■□□□□ 0.07
SNHG1-213ENST00000540725 RILPL1Q5EBL4 403 aa15.47■□□□□ 0.07
SNHG1-213ENST00000540725 SPECC1Q5M775 1068 aa15.47■□□□□ 0.07
SNHG1-213ENST00000540725 VARS2Q5ST30 1063 aaKnown RBP15.47■□□□□ 0.07
SNHG1-213ENST00000540725 NPAS3Q8IXF0 933 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms