RNA–Protein interactions for RNA: ENST00000539662.1

HMGA2-209, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3

Gene HMGA2, Length 485 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-209ENST00000539662 GRXCR2A6NFK2 248 aa11.69□□□□□ -0.54
HMGA2-209ENST00000539662 SOD2P04179 222 aa11.69□□□□□ -0.54
HMGA2-209ENST00000539662 CNPP09543 421 aaKnown RBP11.69□□□□□ -0.54
HMGA2-209ENST00000539662 KCNE1P15382 129 aa11.69□□□□□ -0.54
HMGA2-209ENST00000539662 EPCAMP16422 314 aa11.69□□□□□ -0.54
HMGA2-209ENST00000539662 RPL17P18621 184 aaKnown RBP11.69□□□□□ -0.54
HMGA2-209ENST00000539662 BRCC3P46736 316 aa11.69□□□□□ -0.54
HMGA2-209ENST00000539662 ACOT2P49753 483 aa11.69□□□□□ -0.54
HMGA2-209ENST00000539662 SMC1AQ14683 1233 aaKnown RBP11.69□□□□□ -0.54
HMGA2-209ENST00000539662 LEXMQ3ZCV2 418 aa11.69□□□□□ -0.54
HMGA2-209ENST00000539662 TJAP1Q5JTD0 557 aa11.69□□□□□ -0.54
HMGA2-209ENST00000539662 RTP2Q5QGT7 225 aa11.69□□□□□ -0.54
HMGA2-209ENST00000539662 L1TD1Q5T7N2 865 aaKnown RBP11.69□□□□□ -0.54
HMGA2-209ENST00000539662 KIAA0319Q5VV43 1072 aa11.69□□□□□ -0.54
HMGA2-209ENST00000539662 FUT10Q6P4F1 479 aa11.69□□□□□ -0.54
HMGA2-209ENST00000539662 CNNM4Q6P4Q7 775 aa11.69□□□□□ -0.54
HMGA2-209ENST00000539662 EPM2AIP1Q7L775 607 aaPredicted RBP11.69□□□□□ -0.54
HMGA2-209ENST00000539662 MSLNLQ96KJ4 702 aa11.69□□□□□ -0.54
HMGA2-209ENST00000539662 MSTO1Q9BUK6 570 aa11.69□□□□□ -0.54
HMGA2-209ENST00000539662 HERC2P3Q9BVR0 1158 aa11.69□□□□□ -0.54
HMGA2-209ENST00000539662 SCAND2PQ9GZW5 306 aaPredicted RBP11.69□□□□□ -0.54
HMGA2-209ENST00000539662 NGRNQ9NPE2 291 aaKnown RBP11.69□□□□□ -0.54
HMGA2-209ENST00000539662 CNTN3Q9P232 1028 aa11.69□□□□□ -0.54
HMGA2-209ENST00000539662 SEL1LQ9UBV2 794 aa11.69□□□□□ -0.54
HMGA2-209ENST00000539662 CPSF3Q9UKF6 684 aaKnown RBP11.69□□□□□ -0.54
HMGA2-209ENST00000539662 ADAM28Q9UKQ2 775 aa11.69□□□□□ -0.54
HMGA2-209ENST00000539662 STYXL1Q9Y6J8 313 aa11.69□□□□□ -0.54
HMGA2-209ENST00000539662 A0A1W2PQ27 194 aa11.68□□□□□ -0.54
HMGA2-209ENST00000539662 A0A1W2PQ64 194 aa11.68□□□□□ -0.54
HMGA2-209ENST00000539662 A0A1W2PQD8 194 aa11.68□□□□□ -0.54
HMGA2-209ENST00000539662 GOLGA8IPA6NC78 632 aa11.68□□□□□ -0.54
HMGA2-209ENST00000539662 GOLGA8JA6NMD2 632 aa11.68□□□□□ -0.54
HMGA2-209ENST00000539662 PPEF2O14830 753 aa11.68□□□□□ -0.54
HMGA2-209ENST00000539662 OGTO15294 1046 aa11.68□□□□□ -0.54
HMGA2-209ENST00000539662 TADA2AO75478 443 aa11.68□□□□□ -0.54
HMGA2-209ENST00000539662 SLFN14P0C7P3 912 aa11.68□□□□□ -0.54
HMGA2-209ENST00000539662 YARSP54577 528 aaKnown RBP11.68□□□□□ -0.54
HMGA2-209ENST00000539662 UPP1Q16831 310 aa11.68□□□□□ -0.54
HMGA2-209ENST00000539662 SYCE2Q6PIF2 218 aa11.68□□□□□ -0.54
HMGA2-209ENST00000539662 PRSS55Q6UWB4 352 aaPredicted RBP11.68□□□□□ -0.54
HMGA2-209ENST00000539662 UNC13DQ70J99 1090 aa11.68□□□□□ -0.54
HMGA2-209ENST00000539662 CCDC65Q8IXS2 484 aa11.68□□□□□ -0.54
HMGA2-209ENST00000539662 C12orf76Q8N812 135 aaPredicted RBP11.68□□□□□ -0.54
HMGA2-209ENST00000539662 SAAL1Q96ER3 474 aa11.68□□□□□ -0.54
HMGA2-209ENST00000539662 KLHL5Q96PQ7 755 aa11.68□□□□□ -0.54
HMGA2-209ENST00000539662 ACCSQ96QU6 501 aa11.68□□□□□ -0.54
HMGA2-209ENST00000539662 CBWD1Q9BRT8 395 aa11.68□□□□□ -0.54
HMGA2-209ENST00000539662 COLEC11Q9BWP8 271 aa11.68□□□□□ -0.54
HMGA2-209ENST00000539662 PCIF1Q9H4Z3 704 aa11.68□□□□□ -0.54
HMGA2-209ENST00000539662 SLC39A2Q9NP94 309 aa11.68□□□□□ -0.54
HMGA2-209ENST00000539662 CD320Q9NPF0 282 aa11.68□□□□□ -0.54
HMGA2-209ENST00000539662 CHST7Q9NS84 486 aa11.68□□□□□ -0.54
HMGA2-209ENST00000539662 ATP6V1DQ9Y5K8 247 aa11.68□□□□□ -0.54
HMGA2-209ENST00000539662 HCFC2Q9Y5Z7 792 aa11.68□□□□□ -0.54
HMGA2-209ENST00000539662 ADAM12O43184 909 aa11.67□□□□□ -0.54
HMGA2-209ENST00000539662 TGFB1I1O43294 461 aa11.67□□□□□ -0.54
HMGA2-209ENST00000539662 GADD45BO75293 160 aaPredicted RBP11.67□□□□□ -0.54
HMGA2-209ENST00000539662 NFICP08651 508 aa11.67□□□□□ -0.54
HMGA2-209ENST00000539662 CLTAP09496 248 aa11.67□□□□□ -0.54
HMGA2-209ENST00000539662 SYKP43405 635 aa11.67□□□□□ -0.54
HMGA2-209ENST00000539662 NDUFV1P49821 464 aa11.67□□□□□ -0.54
HMGA2-209ENST00000539662 DSG1Q02413 1049 aa11.67□□□□□ -0.54
HMGA2-209ENST00000539662 STK4Q13043 487 aa11.67□□□□□ -0.54
HMGA2-209ENST00000539662 ZBTB6Q15916 424 aa11.67□□□□□ -0.54
HMGA2-209ENST00000539662 KMT5BQ4FZB7 885 aa11.67□□□□□ -0.54
HMGA2-209ENST00000539662 FAM26FQ5R3K3 315 aa11.67□□□□□ -0.54
HMGA2-209ENST00000539662 PTCRAQ6ISU1 281 aaPredicted RBP11.67□□□□□ -0.54
HMGA2-209ENST00000539662 PDE12Q6L8Q7 609 aaKnown RBP11.67□□□□□ -0.54
HMGA2-209ENST00000539662 APBB1IPQ7Z5R6 666 aaPredicted RBP11.67□□□□□ -0.54
HMGA2-209ENST00000539662 GLYCTKQ8IVS8 523 aa11.67□□□□□ -0.54
HMGA2-209ENST00000539662 NELFCDQ8IXH7 590 aa11.67□□□□□ -0.54
HMGA2-209ENST00000539662 ADAMTS19Q8TE59 1207 aa11.67□□□□□ -0.54
HMGA2-209ENST00000539662 SLC22A17Q8WUG5 538 aa11.67□□□□□ -0.54
HMGA2-209ENST00000539662 SCFD1Q8WVM8 642 aa11.67□□□□□ -0.54
HMGA2-209ENST00000539662 POMGNT1Q8WZA1 660 aa11.67□□□□□ -0.54
HMGA2-209ENST00000539662 HVCN1Q96D96 273 aa11.67□□□□□ -0.54
HMGA2-209ENST00000539662 FAM212AQ96EL1 285 aa11.67□□□□□ -0.54
HMGA2-209ENST00000539662 TOPORSQ9NS56 1045 aaPredicted RBP11.67□□□□□ -0.54
HMGA2-209ENST00000539662 AGO2Q9UKV8 859 aaKnown RBP11.67□□□□□ -0.54
HMGA2-209ENST00000539662 IRAK3Q9Y616 596 aa11.67□□□□□ -0.54
HMGA2-209ENST00000539662 DLL1O00548 723 aa11.66□□□□□ -0.54
HMGA2-209ENST00000539662 PODXLO00592 558 aa11.66□□□□□ -0.54
HMGA2-209ENST00000539662 TEX28O15482 410 aa11.66□□□□□ -0.54
HMGA2-209ENST00000539662 MBTPS2O43462 519 aa11.66□□□□□ -0.54
HMGA2-209ENST00000539662 B3GAT3O94766 335 aa11.66□□□□□ -0.54
HMGA2-209ENST00000539662 ZNF202O95125 648 aa11.66□□□□□ -0.54
HMGA2-209ENST00000539662 ADRB2P07550 413 aa11.66□□□□□ -0.54
HMGA2-209ENST00000539662 WEE2P0C1S8 567 aa11.66□□□□□ -0.54
HMGA2-209ENST00000539662 SPATA31D3P0C874 917 aa11.66□□□□□ -0.54
HMGA2-209ENST00000539662 GLUD2P49448 558 aa11.66□□□□□ -0.54
HMGA2-209ENST00000539662 AMPD3Q01432 767 aa11.66□□□□□ -0.54
HMGA2-209ENST00000539662 SNW1Q13573 536 aaKnown RBP11.66□□□□□ -0.54
HMGA2-209ENST00000539662 FAM171A1Q5VUB5 890 aa11.66□□□□□ -0.54
HMGA2-209ENST00000539662 JADE1Q6IE81 842 aa11.66□□□□□ -0.54
HMGA2-209ENST00000539662 ANKRD54Q6NXT1 300 aa11.66□□□□□ -0.54
HMGA2-209ENST00000539662 DCLRE1AQ6PJP8 1040 aa11.66□□□□□ -0.54
HMGA2-209ENST00000539662 RSPO2Q6UXX9 243 aaPredicted RBP11.66□□□□□ -0.54
HMGA2-209ENST00000539662 TMEM184AQ6ZMB5 413 aa11.66□□□□□ -0.54
HMGA2-209ENST00000539662 KRBA2Q6ZNG9 492 aa11.66□□□□□ -0.54
HMGA2-209ENST00000539662 SPATA31D4Q6ZUB0 917 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms