RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 ADRB2P07550 413 aa17.15■□□□□ 0.34
RPAIN-206ENST00000539417 GARTP22102 1010 aa17.15■□□□□ 0.34
RPAIN-206ENST00000539417 UBE3AQ05086 875 aa17.15■□□□□ 0.34
RPAIN-206ENST00000539417 HYAL1Q12794 435 aa17.15■□□□□ 0.34
RPAIN-206ENST00000539417 ARMCX5Q6P1M9 558 aa17.15■□□□□ 0.34
RPAIN-206ENST00000539417 DDX53Q86TM3 631 aaKnown RBP17.15■□□□□ 0.34
RPAIN-206ENST00000539417 RNF168Q8IYW5 571 aaPredicted RBP17.15■□□□□ 0.34
RPAIN-206ENST00000539417 VPS52Q8N1B4 723 aa17.15■□□□□ 0.34
RPAIN-206ENST00000539417 TCF25Q9BQ70 676 aa17.15■□□□□ 0.34
RPAIN-206ENST00000539417 ZBP1Q9H171 429 aa17.15■□□□□ 0.34
RPAIN-206ENST00000539417 NSUN3Q9H649 340 aaKnown RBP17.15■□□□□ 0.34
RPAIN-206ENST00000539417 RPF1Q9H9Y2 349 aaKnown RBP17.15■□□□□ 0.34
RPAIN-206ENST00000539417 AGPAT3Q9NRZ7 376 aa17.15■□□□□ 0.34
RPAIN-206ENST00000539417 PCDHA5Q9Y5H7 936 aa17.15■□□□□ 0.34
RPAIN-206ENST00000539417 PER2O15055 1255 aa17.14■□□□□ 0.33
RPAIN-206ENST00000539417 NFICP08651 508 aa17.14■□□□□ 0.33
RPAIN-206ENST00000539417 RBM10P98175 930 aaKnown RBP17.14■□□□□ 0.33
RPAIN-206ENST00000539417 KRT17Q04695 432 aa17.14■□□□□ 0.33
RPAIN-206ENST00000539417 PSMD2Q13200 908 aa17.14■□□□□ 0.33
RPAIN-206ENST00000539417 HSP90AA2PQ14568 343 aaPredicted RBP17.14■□□□□ 0.33
RPAIN-206ENST00000539417 KCNB1Q14721 858 aa17.14■□□□□ 0.33
RPAIN-206ENST00000539417 ZBTB6Q15916 424 aa17.14■□□□□ 0.33
RPAIN-206ENST00000539417 JADE1Q6IE81 842 aa17.14■□□□□ 0.33
RPAIN-206ENST00000539417 KANK3Q6NY19 840 aa17.14■□□□□ 0.33
RPAIN-206ENST00000539417 STXBP4Q6ZWJ1 553 aa17.14■□□□□ 0.33
RPAIN-206ENST00000539417 RBM23Q86U06 439 aaKnown RBP17.14■□□□□ 0.33
RPAIN-206ENST00000539417 SPATA20Q8TB22 786 aa17.14■□□□□ 0.33
RPAIN-206ENST00000539417 NOC3LQ8WTT2 800 aaKnown RBP17.14■□□□□ 0.33
RPAIN-206ENST00000539417 KIF12Q96FN5 646 aa17.14■□□□□ 0.33
RPAIN-206ENST00000539417 KCTD10Q9H3F6 313 aa17.14■□□□□ 0.33
RPAIN-206ENST00000539417 LMBRD1Q9NUN5 540 aa17.14■□□□□ 0.33
RPAIN-206ENST00000539417 UBE4BO95155 1302 aa17.13■□□□□ 0.33
RPAIN-206ENST00000539417 PPEF2O14830 753 aa17.13■□□□□ 0.33
RPAIN-206ENST00000539417 LINC01565O15544 149 aa17.13■□□□□ 0.33
RPAIN-206ENST00000539417 UPP1Q16831 310 aa17.13■□□□□ 0.33
RPAIN-206ENST00000539417 KNOP1Q1ED39 458 aaKnown RBP17.13■□□□□ 0.33
RPAIN-206ENST00000539417 ISM2Q6H9L7 571 aa17.13■□□□□ 0.33
RPAIN-206ENST00000539417 TMC7Q7Z402 723 aa17.13■□□□□ 0.33
RPAIN-206ENST00000539417 CBWD2Q8IUF1 395 aa17.13■□□□□ 0.33
RPAIN-206ENST00000539417 EFCAB13Q8IY85 973 aa17.13■□□□□ 0.33
RPAIN-206ENST00000539417 MICAL1Q8TDZ2 1067 aa17.13■□□□□ 0.33
RPAIN-206ENST00000539417 COLEC11Q9BWP8 271 aa17.13■□□□□ 0.33
RPAIN-206ENST00000539417 PLEKHA5Q9HAU0 1116 aa17.13■□□□□ 0.33
RPAIN-206ENST00000539417 HSPBP1Q9NZL4 362 aa17.13■□□□□ 0.33
RPAIN-206ENST00000539417 PUF60Q9UHX1 559 aaKnown RBP17.13■□□□□ 0.33
RPAIN-206ENST00000539417 I3L4J1 428 aa17.12■□□□□ 0.33
RPAIN-206ENST00000539417 CYP2J2P51589 502 aa17.12■□□□□ 0.33
RPAIN-206ENST00000539417 PPP2R3AQ06190 1150 aa17.12■□□□□ 0.33
RPAIN-206ENST00000539417 TIGD5Q53EQ6 642 aa17.12■□□□□ 0.33
RPAIN-206ENST00000539417 IGFLR1Q9H665 355 aa17.12■□□□□ 0.33
RPAIN-206ENST00000539417 ENTPD7Q9NQZ7 604 aa17.12■□□□□ 0.33
RPAIN-206ENST00000539417 ADAM28Q9UKQ2 775 aa17.12■□□□□ 0.33
RPAIN-206ENST00000539417 C2orf71A6NGG8 1288 aa17.12■□□□□ 0.33
RPAIN-206ENST00000539417 PODXLO00592 558 aa17.12■□□□□ 0.33
RPAIN-206ENST00000539417 EXTL3O43909 919 aa17.12■□□□□ 0.33
RPAIN-206ENST00000539417 KINO60870 393 aaKnown RBP17.12■□□□□ 0.33
RPAIN-206ENST00000539417 CXCL14O95715 111 aa17.12■□□□□ 0.33
RPAIN-206ENST00000539417 CTSAP10619 480 aa17.12■□□□□ 0.33
RPAIN-206ENST00000539417 BRCC3P46736 316 aa17.12■□□□□ 0.33
RPAIN-206ENST00000539417 NRIP1P48552 1158 aa17.12■□□□□ 0.33
RPAIN-206ENST00000539417 SKIV2LQ15477 1246 aaKnown RBP17.12■□□□□ 0.33
RPAIN-206ENST00000539417 KYAT1Q16773 422 aa17.12■□□□□ 0.33
RPAIN-206ENST00000539417 FUT10Q6P4F1 479 aa17.12■□□□□ 0.33
RPAIN-206ENST00000539417 BRSK2Q8IWQ3 736 aa17.12■□□□□ 0.33
RPAIN-206ENST00000539417 GPD1LQ8N335 351 aa17.12■□□□□ 0.33
RPAIN-206ENST00000539417 RDH13Q8NBN7 331 aa17.12■□□□□ 0.33
RPAIN-206ENST00000539417 VN1R2Q8NFZ6 395 aa17.12■□□□□ 0.33
RPAIN-206ENST00000539417 HERC2P3Q9BVR0 1158 aa17.12■□□□□ 0.33
RPAIN-206ENST00000539417 MAN1B1Q9UKM7 699 aa17.12■□□□□ 0.33
RPAIN-206ENST00000539417 VWA8A3KMH1 1905 aa17.11■□□□□ 0.33
RPAIN-206ENST00000539417 PTPRJQ12913 1337 aa17.11■□□□□ 0.33
RPAIN-206ENST00000539417 TULP1O00294 542 aaPredicted RBP17.11■□□□□ 0.33
RPAIN-206ENST00000539417 C2CD2LO14523 706 aa17.11■□□□□ 0.33
RPAIN-206ENST00000539417 LILRB3O75022 631 aa17.11■□□□□ 0.33
RPAIN-206ENST00000539417 TADA2AO75478 443 aa17.11■□□□□ 0.33
RPAIN-206ENST00000539417 B3GAT3O94766 335 aa17.11■□□□□ 0.33
RPAIN-206ENST00000539417 SOD2P04179 222 aa17.11■□□□□ 0.33
RPAIN-206ENST00000539417 BMP6P22004 513 aa17.11■□□□□ 0.33
RPAIN-206ENST00000539417 TFF2Q03403 129 aa17.11■□□□□ 0.33
RPAIN-206ENST00000539417 DLX2Q07687 328 aaPredicted RBP17.11■□□□□ 0.33
RPAIN-206ENST00000539417 PTPN14Q15678 1187 aa17.11■□□□□ 0.33
RPAIN-206ENST00000539417 CAMK4Q16566 473 aa17.11■□□□□ 0.33
RPAIN-206ENST00000539417 MRPL43Q8N983 215 aaKnown RBP17.11■□□□□ 0.33
RPAIN-206ENST00000539417 FBXL18Q96ME1 805 aa17.11■□□□□ 0.33
RPAIN-206ENST00000539417 GZF1Q9H116 711 aaPredicted RBP17.11■□□□□ 0.33
RPAIN-206ENST00000539417 PDE11AQ9HCR9 933 aa17.11■□□□□ 0.33
RPAIN-206ENST00000539417 RBAKQ9NYW8 714 aaPredicted RBP17.11■□□□□ 0.33
RPAIN-206ENST00000539417 GLP2RO95838 553 aa17.1■□□□□ 0.33
RPAIN-206ENST00000539417 CA8P35219 290 aa17.1■□□□□ 0.33
RPAIN-206ENST00000539417 LTBRP36941 435 aa17.1■□□□□ 0.33
RPAIN-206ENST00000539417 RTP2Q5QGT7 225 aa17.1■□□□□ 0.33
RPAIN-206ENST00000539417 KIAA0319Q5VV43 1072 aa17.1■□□□□ 0.33
RPAIN-206ENST00000539417 SPATA1Q5VX52 437 aa17.1■□□□□ 0.33
RPAIN-206ENST00000539417 LMBRD2Q68DH5 695 aaPredicted RBP17.1■□□□□ 0.33
RPAIN-206ENST00000539417 DCLRE1AQ6PJP8 1040 aa17.1■□□□□ 0.33
RPAIN-206ENST00000539417 ELOA2Q8IYF1 753 aaPredicted RBP17.1■□□□□ 0.33
RPAIN-206ENST00000539417 PLEKHO2Q8TD55 490 aa17.1■□□□□ 0.33
RPAIN-206ENST00000539417 SMARCE1Q969G3 411 aa17.1■□□□□ 0.33
RPAIN-206ENST00000539417 TLE6Q9H808 572 aa17.1■□□□□ 0.33
RPAIN-206ENST00000539417 CHST7Q9NS84 486 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 137.4 ms