RNA–Protein interactions for RNA: ENST00000539091.5

RAP1B-220, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAP1B, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-220ENST00000539091 DSC1Q08554 894 aa22.57■■□□□ 1.2
RAP1B-220ENST00000539091 SNRNP35Q16560 246 aaKnown RBP22.57■■□□□ 1.2
RAP1B-220ENST00000539091 XKR4Q5GH76 650 aa22.57■■□□□ 1.2
RAP1B-220ENST00000539091 CEP135Q66GS9 1140 aa22.57■■□□□ 1.2
RAP1B-220ENST00000539091 KLHL10Q6JEL2 608 aa22.57■■□□□ 1.2
RAP1B-220ENST00000539091 SPRED2Q7Z698 418 aa22.57■■□□□ 1.2
RAP1B-220ENST00000539091 SLC39A11Q8N1S5 342 aa22.57■■□□□ 1.2
RAP1B-220ENST00000539091 GSTCDQ8NEC7 633 aa22.57■■□□□ 1.2
RAP1B-220ENST00000539091 GPT2Q8TD30 523 aa22.57■■□□□ 1.2
RAP1B-220ENST00000539091 DHTKD1Q96HY7 919 aaPredicted RBP22.57■■□□□ 1.2
RAP1B-220ENST00000539091 PPP1R10Q96QC0 940 aaKnown RBP22.57■■□□□ 1.2
RAP1B-220ENST00000539091 CDX2Q99626 313 aaPredicted RBP22.57■■□□□ 1.2
RAP1B-220ENST00000539091 KCTD10Q9H3F6 313 aa22.57■■□□□ 1.2
RAP1B-220ENST00000539091 MTMR10Q9NXD2 777 aa22.57■■□□□ 1.2
RAP1B-220ENST00000539091 DACH1Q9UI36 760 aa22.57■■□□□ 1.2
RAP1B-220ENST00000539091 BICDL2A1A5D9 508 aa22.56■■□□□ 1.2
RAP1B-220ENST00000539091 CSPG5O95196 566 aa22.56■■□□□ 1.2
RAP1B-220ENST00000539091 ITGB1P05556 798 aa22.56■■□□□ 1.2
RAP1B-220ENST00000539091 RPL9P32969 192 aaKnown RBP22.56■■□□□ 1.2
RAP1B-220ENST00000539091 PLCB3Q01970 1234 aa22.56■■□□□ 1.2
RAP1B-220ENST00000539091 SPAG1Q07617 926 aa22.56■■□□□ 1.2
RAP1B-220ENST00000539091 ADAM9Q13443 819 aa22.56■■□□□ 1.2
RAP1B-220ENST00000539091 MORC3Q14149 939 aa22.56■■□□□ 1.2
RAP1B-220ENST00000539091 MYBPC2Q14324 1141 aa22.56■■□□□ 1.2
RAP1B-220ENST00000539091 COBLL1Q53SF7 1204 aa22.56■■□□□ 1.2
RAP1B-220ENST00000539091 JADE1Q6IE81 842 aa22.56■■□□□ 1.2
RAP1B-220ENST00000539091 NT5DC4Q86YG4 428 aa22.56■■□□□ 1.2
RAP1B-220ENST00000539091 BRSK2Q8IWQ3 736 aa22.56■■□□□ 1.2
RAP1B-220ENST00000539091 MICALL1Q8N3F8 863 aa22.56■■□□□ 1.2
RAP1B-220ENST00000539091 MYLIPQ8WY64 445 aa22.56■■□□□ 1.2
RAP1B-220ENST00000539091 IGSF21Q96ID5 467 aa22.56■■□□□ 1.2
RAP1B-220ENST00000539091 ENTPD7Q9NQZ7 604 aa22.56■■□□□ 1.2
RAP1B-220ENST00000539091 TRAF3IP3Q9Y228 551 aa22.56■■□□□ 1.2
RAP1B-220ENST00000539091 LZTS1Q9Y250 596 aa22.56■■□□□ 1.2
RAP1B-220ENST00000539091 NUB1Q9Y5A7 615 aa22.56■■□□□ 1.2
RAP1B-220ENST00000539091 CETN3O15182 167 aa22.55■■□□□ 1.2
RAP1B-220ENST00000539091 TRAPPC3O43617 180 aa22.55■■□□□ 1.2
RAP1B-220ENST00000539091 FAM189A1O60320 539 aa22.55■■□□□ 1.2
RAP1B-220ENST00000539091 TMEM191BP0C7N4 346 aa22.55■■□□□ 1.2
RAP1B-220ENST00000539091 NR2F2P24468 414 aa22.55■■□□□ 1.2
RAP1B-220ENST00000539091 TFAMQ00059 246 aaKnown RBP22.55■■□□□ 1.2
RAP1B-220ENST00000539091 ELAVL2Q12926 359 aaKnown RBP22.55■■□□□ 1.2
RAP1B-220ENST00000539091 CCDC183Q5T5S1 534 aa22.55■■□□□ 1.2
RAP1B-220ENST00000539091 KIAA1841Q6NSI8 718 aa22.55■■□□□ 1.2
RAP1B-220ENST00000539091 DCLRE1AQ6PJP8 1040 aa22.55■■□□□ 1.2
RAP1B-220ENST00000539091 TMC7Q7Z402 723 aa22.55■■□□□ 1.2
RAP1B-220ENST00000539091 SLC9A9Q8IVB4 645 aa22.55■■□□□ 1.2
RAP1B-220ENST00000539091 ADSSL1Q8N142 457 aa22.55■■□□□ 1.2
RAP1B-220ENST00000539091 POF1BQ8WVV4 589 aa22.55■■□□□ 1.2
RAP1B-220ENST00000539091 LMCD1Q9NZU5 365 aa22.55■■□□□ 1.2
RAP1B-220ENST00000539091 C2CD2Q9Y426 696 aa22.55■■□□□ 1.2
RAP1B-220ENST00000539091 EPOPA6NHQ4 379 aa22.54■■□□□ 1.2
RAP1B-220ENST00000539091 B3GAT3O94766 335 aa22.54■■□□□ 1.2
RAP1B-220ENST00000539091 TNNC2P02585 160 aa22.54■■□□□ 1.2
RAP1B-220ENST00000539091 KRT13P13646 458 aa22.54■■□□□ 1.2
RAP1B-220ENST00000539091 CYP3A5P20815 502 aa22.54■■□□□ 1.2
RAP1B-220ENST00000539091 LRRC63Q05C16 580 aa22.54■■□□□ 1.2
RAP1B-220ENST00000539091 EDRF1Q3B7T1 1238 aa22.54■■□□□ 1.2
RAP1B-220ENST00000539091 PDE12Q6L8Q7 609 aaKnown RBP22.54■■□□□ 1.2
RAP1B-220ENST00000539091 SASS6Q6UVJ0 657 aa22.54■■□□□ 1.2
RAP1B-220ENST00000539091 CRELD2Q6UXH1 353 aaPredicted RBP22.54■■□□□ 1.2
RAP1B-220ENST00000539091 DDX53Q86TM3 631 aaKnown RBP22.54■■□□□ 1.2
RAP1B-220ENST00000539091 CBWD2Q8IUF1 395 aa22.54■■□□□ 1.2
RAP1B-220ENST00000539091 SPPL3Q8TCT6 385 aa22.54■■□□□ 1.2
RAP1B-220ENST00000539091 C18orf25Q96B23 403 aaPredicted RBP22.54■■□□□ 1.2
RAP1B-220ENST00000539091 MRPL38Q96DV4 380 aaKnown RBP22.54■■□□□ 1.2
RAP1B-220ENST00000539091 ANKRD36BP1Q96IX9 119 aa22.54■■□□□ 1.2
RAP1B-220ENST00000539091 TLR9Q9NR96 1032 aa22.54■■□□□ 1.2
RAP1B-220ENST00000539091 ADAM28Q9UKQ2 775 aa22.54■■□□□ 1.2
RAP1B-220ENST00000539091 PODXLO00592 558 aa22.53■■□□□ 1.2
RAP1B-220ENST00000539091 GRM6O15303 877 aa22.53■■□□□ 1.2
RAP1B-220ENST00000539091 CLSTN1O94985 981 aa22.53■■□□□ 1.2
RAP1B-220ENST00000539091 LINC00271P0C7V0 271 aa22.53■■□□□ 1.2
RAP1B-220ENST00000539091 DLATP10515 647 aaKnown RBP22.53■■□□□ 1.2
RAP1B-220ENST00000539091 TNNI1P19237 187 aa22.53■■□□□ 1.2
RAP1B-220ENST00000539091 CCNE1P24864 410 aa22.53■■□□□ 1.2
RAP1B-220ENST00000539091 TIGD5Q53EQ6 642 aa22.53■■□□□ 1.2
RAP1B-220ENST00000539091 VPS52Q8N1B4 723 aa22.53■■□□□ 1.2
RAP1B-220ENST00000539091 MLKLQ8NB16 471 aa22.53■■□□□ 1.2
RAP1B-220ENST00000539091 CCDC127Q96BQ5 260 aa22.53■■□□□ 1.2
RAP1B-220ENST00000539091 ZMAT2Q96NC0 199 aaKnown RBP22.53■■□□□ 1.2
RAP1B-220ENST00000539091 PDE11AQ9HCR9 933 aa22.53■■□□□ 1.2
RAP1B-220ENST00000539091 SSX2IPQ9Y2D8 614 aa22.53■■□□□ 1.2
RAP1B-220ENST00000539091 SF3B1O75533 1304 aaKnown RBP eCLIP22.53■■□□□ 1.26e-7■■□□□ 14.5
RAP1B-220ENST00000539091 FGFR1OPO95684 399 aaKnown RBP22.52■■□□□ 1.2
RAP1B-220ENST00000539091 ADRB2P07550 413 aa22.52■■□□□ 1.2
RAP1B-220ENST00000539091 NFICP08651 508 aa22.52■■□□□ 1.2
RAP1B-220ENST00000539091 EPB41P11171 864 aaKnown RBP22.52■■□□□ 1.2
RAP1B-220ENST00000539091 PSMC2P35998 433 aaKnown RBP22.52■■□□□ 1.2
RAP1B-220ENST00000539091 CLCNKBP51801 687 aa22.52■■□□□ 1.2
RAP1B-220ENST00000539091 FKBP3Q00688 224 aaKnown RBP22.52■■□□□ 1.2
RAP1B-220ENST00000539091 PAK1Q13153 545 aa22.52■■□□□ 1.2
RAP1B-220ENST00000539091 NFIL3Q16649 462 aa22.52■■□□□ 1.2
RAP1B-220ENST00000539091 TPD52L1Q16890 204 aaPredicted RBP22.52■■□□□ 1.2
RAP1B-220ENST00000539091 SKOR2Q2VWA4 1001 aaPredicted RBP22.52■■□□□ 1.2
RAP1B-220ENST00000539091 ZSWIM2Q8NEG5 633 aa22.52■■□□□ 1.2
RAP1B-220ENST00000539091 NELFBQ8WX92 580 aa22.52■■□□□ 1.2
RAP1B-220ENST00000539091 RABGGTAQ92696 567 aa22.52■■□□□ 1.2
RAP1B-220ENST00000539091 FBXL18Q96ME1 805 aa22.52■■□□□ 1.2
RAP1B-220ENST00000539091 CXCL16Q9H2A7 254 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms