RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 B3GAT3O94766 335 aa13.74□□□□□ -0.21
VAMP1-206ENST00000538970 POU2F2P09086 479 aa13.74□□□□□ -0.21
VAMP1-206ENST00000538970 PRPHP41219 470 aa13.74□□□□□ -0.21
VAMP1-206ENST00000538970 PEX3P56589 373 aa13.74□□□□□ -0.21
VAMP1-206ENST00000538970 NTHL1P78549 312 aa13.74□□□□□ -0.21
VAMP1-206ENST00000538970 MAPK7Q13164 816 aa13.74□□□□□ -0.21
VAMP1-206ENST00000538970 DMP1Q13316 513 aaPredicted RBP13.74□□□□□ -0.21
VAMP1-206ENST00000538970 RAB33AQ14088 237 aa13.74□□□□□ -0.21
VAMP1-206ENST00000538970 UPP1Q16831 310 aa13.74□□□□□ -0.21
VAMP1-206ENST00000538970 ZNF568Q3ZCX4 644 aa13.74□□□□□ -0.21
VAMP1-206ENST00000538970 C8orf34Q49A92 452 aa13.74□□□□□ -0.21
VAMP1-206ENST00000538970 XKR4Q5GH76 650 aa13.74□□□□□ -0.21
VAMP1-206ENST00000538970 KRT79Q5XKE5 535 aa13.74□□□□□ -0.21
VAMP1-206ENST00000538970 DCLRE1AQ6PJP8 1040 aa13.74□□□□□ -0.21
VAMP1-206ENST00000538970 TAS1R3Q7RTX0 852 aa13.74□□□□□ -0.21
VAMP1-206ENST00000538970 KIAA2013Q8IYS2 634 aa13.74□□□□□ -0.21
VAMP1-206ENST00000538970 DTWD2Q8NBA8 298 aa13.74□□□□□ -0.21
VAMP1-206ENST00000538970 C3orf58Q8NDZ4 430 aa13.74□□□□□ -0.21
VAMP1-206ENST00000538970 SLC7A14Q8TBB6 771 aa13.74□□□□□ -0.21
VAMP1-206ENST00000538970 GPR152Q8TDT2 470 aa13.74□□□□□ -0.21
VAMP1-206ENST00000538970 ACO2Q99798 780 aaKnown RBP13.74□□□□□ -0.21
VAMP1-206ENST00000538970 MMTAG2Q9BU76 263 aaKnown RBP13.74□□□□□ -0.21
VAMP1-206ENST00000538970 RUSC1Q9BVN2 902 aa13.74□□□□□ -0.21
VAMP1-206ENST00000538970 TMEM134Q9H6X4 195 aa13.74□□□□□ -0.21
VAMP1-206ENST00000538970 PTPRHQ9HD43 1115 aa13.74□□□□□ -0.21
VAMP1-206ENST00000538970 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.74□□□□□ -0.21
VAMP1-206ENST00000538970 TOPORSQ9NS56 1045 aaPredicted RBP13.74□□□□□ -0.21
VAMP1-206ENST00000538970 CA14Q9ULX7 337 aa13.74□□□□□ -0.21
VAMP1-206ENST00000538970 DNM3Q9UQ16 869 aa13.74□□□□□ -0.21
VAMP1-206ENST00000538970 VWA8A3KMH1 1905 aa13.74□□□□□ -0.21
VAMP1-206ENST00000538970 DOCK8Q8NF50 2099 aa13.73□□□□□ -0.21
VAMP1-206ENST00000538970 SMIM28A0A1B0GU29 152 aa13.73□□□□□ -0.21
VAMP1-206ENST00000538970 ABLIM1O14639 778 aa13.73□□□□□ -0.21
VAMP1-206ENST00000538970 CCL16O15467 120 aa13.73□□□□□ -0.21
VAMP1-206ENST00000538970 XYLBO75191 536 aa13.73□□□□□ -0.21
VAMP1-206ENST00000538970 PROZP22891 400 aa13.73□□□□□ -0.21
VAMP1-206ENST00000538970 TKTP29401 623 aaKnown RBP13.73□□□□□ -0.21
VAMP1-206ENST00000538970 CDC25AP30304 524 aa13.73□□□□□ -0.21
VAMP1-206ENST00000538970 OR1D2P34982 312 aa13.73□□□□□ -0.21
VAMP1-206ENST00000538970 YARSP54577 528 aaKnown RBP13.73□□□□□ -0.21
VAMP1-206ENST00000538970 SOX4Q06945 474 aaPredicted RBP13.73□□□□□ -0.21
VAMP1-206ENST00000538970 ANGPT1Q15389 498 aa13.73□□□□□ -0.21
VAMP1-206ENST00000538970 RINT1Q6NUQ1 792 aa13.73□□□□□ -0.21
VAMP1-206ENST00000538970 ALKAL1Q6UXT8 129 aa13.73□□□□□ -0.21
VAMP1-206ENST00000538970 RSPO2Q6UXX9 243 aaPredicted RBP13.73□□□□□ -0.21
VAMP1-206ENST00000538970 KCNK18Q7Z418 384 aa13.73□□□□□ -0.21
VAMP1-206ENST00000538970 ST13P5Q8NFI4 369 aaPredicted RBP13.73□□□□□ -0.21
VAMP1-206ENST00000538970 DDX27Q96GQ7 796 aaKnown RBP13.73□□□□□ -0.21
VAMP1-206ENST00000538970 DRC1Q96MC2 740 aa13.73□□□□□ -0.21
VAMP1-206ENST00000538970 CCDC94Q9BW85 323 aaPredicted RBP13.73□□□□□ -0.21
VAMP1-206ENST00000538970 TARS2Q9BW92 718 aaKnown RBP13.73□□□□□ -0.21
VAMP1-206ENST00000538970 MRPL4Q9BYD3 311 aaKnown RBP13.73□□□□□ -0.21
VAMP1-206ENST00000538970 TBC1D17Q9HA65 648 aa13.73□□□□□ -0.21
VAMP1-206ENST00000538970 ARHGEF3Q9NR81 526 aa13.73□□□□□ -0.21
VAMP1-206ENST00000538970 SLC2A4RGQ9NR83 387 aa13.73□□□□□ -0.21
VAMP1-206ENST00000538970 CDH7Q9ULB5 785 aa13.73□□□□□ -0.21
VAMP1-206ENST00000538970 BACE2Q9Y5Z0 518 aa13.73□□□□□ -0.21
VAMP1-206ENST00000538970 CDY1Q9Y6F8 540 aa13.73□□□□□ -0.21
VAMP1-206ENST00000538970 EPG5Q9HCE0 2579 aa13.73□□□□□ -0.21
VAMP1-206ENST00000538970 NCOR2Q9Y618 2525 aa13.72□□□□□ -0.21
VAMP1-206ENST00000538970 I3L4J1 428 aa13.72□□□□□ -0.21
VAMP1-206ENST00000538970 TRAPPC3O43617 180 aa13.72□□□□□ -0.21
VAMP1-206ENST00000538970 MCF2P10911 925 aa13.72□□□□□ -0.21
VAMP1-206ENST00000538970 RFX1P22670 979 aa13.72□□□□□ -0.21
VAMP1-206ENST00000538970 BRCC3P46736 316 aa13.72□□□□□ -0.21
VAMP1-206ENST00000538970 OSTNP61366 133 aa13.72□□□□□ -0.21
VAMP1-206ENST00000538970 AXDND1Q5T1B0 1012 aaPredicted RBP13.72□□□□□ -0.21
VAMP1-206ENST00000538970 PARM1Q6UWI2 310 aa13.72□□□□□ -0.21
VAMP1-206ENST00000538970 DTHD1Q6ZMT9 781 aa13.72□□□□□ -0.21
VAMP1-206ENST00000538970 C1orf186Q6ZWK4 172 aa13.72□□□□□ -0.21
VAMP1-206ENST00000538970 FGF13Q92913 245 aa13.72□□□□□ -0.21
VAMP1-206ENST00000538970 FGF14Q92915 247 aa13.72□□□□□ -0.21
VAMP1-206ENST00000538970 ZMAT2Q96NC0 199 aaKnown RBP13.72□□□□□ -0.21
VAMP1-206ENST00000538970 RPP25Q9BUL9 199 aaKnown RBP13.72□□□□□ -0.21
VAMP1-206ENST00000538970 C17orf75Q9HAS0 396 aa13.72□□□□□ -0.21
VAMP1-206ENST00000538970 KMT5AQ9NQR1 393 aa13.72□□□□□ -0.21
VAMP1-206ENST00000538970 SLC38A7Q9NVC3 462 aa13.72□□□□□ -0.21
VAMP1-206ENST00000538970 POLIQ9UNA4 740 aa13.72□□□□□ -0.21
VAMP1-206ENST00000538970 STK25O00506 426 aa13.71□□□□□ -0.21
VAMP1-206ENST00000538970 PODXLO00592 558 aa13.71□□□□□ -0.21
VAMP1-206ENST00000538970 MEFVO15553 781 aaPredicted RBP13.71□□□□□ -0.21
VAMP1-206ENST00000538970 KCNE1P15382 129 aa13.71□□□□□ -0.21
VAMP1-206ENST00000538970 GUCY2CP25092 1073 aa13.71□□□□□ -0.21
VAMP1-206ENST00000538970 ATP2C1P98194 919 aaPredicted RBP13.71□□□□□ -0.21
VAMP1-206ENST00000538970 UVSSAQ2YD98 709 aa13.71□□□□□ -0.21
VAMP1-206ENST00000538970 RILPL1Q5EBL4 403 aa13.71□□□□□ -0.21
VAMP1-206ENST00000538970 HYIQ5T013 277 aa13.71□□□□□ -0.21
VAMP1-206ENST00000538970 PHLDB3Q6NSJ2 640 aa13.71□□□□□ -0.21
VAMP1-206ENST00000538970 MPZL3Q6UWV2 235 aa13.71□□□□□ -0.21
VAMP1-206ENST00000538970 ANKS3Q6ZW76 656 aa13.71□□□□□ -0.21
VAMP1-206ENST00000538970 RTL10Q7L3V2 364 aa13.71□□□□□ -0.21
VAMP1-206ENST00000538970 ITFG1Q8TB96 612 aa13.71□□□□□ -0.21
VAMP1-206ENST00000538970 TIPINQ9BVW5 301 aa13.71□□□□□ -0.21
VAMP1-206ENST00000538970 HCFC1R1Q9NWW0 138 aa13.71□□□□□ -0.21
VAMP1-206ENST00000538970 CNTN3Q9P232 1028 aa13.71□□□□□ -0.21
VAMP1-206ENST00000538970 RBM19Q9Y4C8 960 aaKnown RBP13.71□□□□□ -0.21
VAMP1-206ENST00000538970 SLC16A4O15374 487 aa13.7□□□□□ -0.22
VAMP1-206ENST00000538970 ROR1Q01973 937 aa13.7□□□□□ -0.22
VAMP1-206ENST00000538970 RABEP1Q15276 862 aa13.7□□□□□ -0.22
VAMP1-206ENST00000538970 PABPC1LQ4VXU2 614 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms