RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 MIGA1Q8NAN2 632 aa11.35□□□□□ -0.59
RTN3-208ENST00000537981 ZFP28Q8NHY6 868 aa11.35□□□□□ -0.59
RTN3-208ENST00000537981 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.35□□□□□ -0.59
RTN3-208ENST00000537981 SCYL1Q96KG9 808 aa11.35□□□□□ -0.59
RTN3-208ENST00000537981 FAM161BQ96MY7 647 aa11.35□□□□□ -0.59
RTN3-208ENST00000537981 OLFM3Q96PB7 478 aa11.35□□□□□ -0.59
RTN3-208ENST00000537981 MFRPQ9BY79 579 aa11.35□□□□□ -0.59
RTN3-208ENST00000537981 MIS12Q9H081 205 aa11.35□□□□□ -0.59
RTN3-208ENST00000537981 USP40Q9NVE5 1235 aa11.35□□□□□ -0.59
RTN3-208ENST00000537981 ZNF212Q9UDV6 495 aa11.35□□□□□ -0.59
RTN3-208ENST00000537981 ASAP1Q9ULH1 1129 aa11.35□□□□□ -0.59
RTN3-208ENST00000537981 NAALADL1Q9UQQ1 740 aa11.35□□□□□ -0.59
RTN3-208ENST00000537981 SPO11Q9Y5K1 396 aa11.35□□□□□ -0.59
RTN3-208ENST00000537981 MRPL42Q9Y6G3 142 aaKnown RBP11.35□□□□□ -0.59
RTN3-208ENST00000537981 CNTNAP5Q8WYK1 1306 aa11.35□□□□□ -0.59
RTN3-208ENST00000537981 EP400Q96L91 3159 aa11.34□□□□□ -0.59
RTN3-208ENST00000537981 KIF1AQ12756 1690 aa11.34□□□□□ -0.59
RTN3-208ENST00000537981 SIPA1L3O60292 1781 aaPredicted RBP11.34□□□□□ -0.59
RTN3-208ENST00000537981 A0A1W2PQ67 120 aa11.34□□□□□ -0.59
RTN3-208ENST00000537981 PRPF3O43395 683 aaKnown RBP11.34□□□□□ -0.59
RTN3-208ENST00000537981 FOXD2O60548 495 aaPredicted RBP11.34□□□□□ -0.59
RTN3-208ENST00000537981 SLC5A2P31639 672 aa11.34□□□□□ -0.59
RTN3-208ENST00000537981 NAA20P61599 178 aa11.34□□□□□ -0.59
RTN3-208ENST00000537981 TMEM214Q6NUQ4 689 aaKnown RBP11.34□□□□□ -0.59
RTN3-208ENST00000537981 ZNF790Q6PG37 636 aa11.34□□□□□ -0.59
RTN3-208ENST00000537981 C4orf33Q8N1A6 199 aa11.34□□□□□ -0.59
RTN3-208ENST00000537981 DIS3LQ8TF46 1054 aaKnown RBP11.34□□□□□ -0.59
RTN3-208ENST00000537981 ARHGEF26Q96DR7 871 aa11.34□□□□□ -0.59
RTN3-208ENST00000537981 PPP1R10Q96QC0 940 aaKnown RBP11.34□□□□□ -0.59
RTN3-208ENST00000537981 PANX3Q96QZ0 392 aa11.34□□□□□ -0.59
RTN3-208ENST00000537981 CENPOQ9BU64 300 aa11.34□□□□□ -0.59
RTN3-208ENST00000537981 GRIP2Q9C0E4 1043 aa11.34□□□□□ -0.59
RTN3-208ENST00000537981 LUC7LQ9NQ29 371 aaKnown RBP11.34□□□□□ -0.59
RTN3-208ENST00000537981 PTTG2Q9NZH5 202 aa11.34□□□□□ -0.59
RTN3-208ENST00000537981 TJP1Q07157 1748 aa11.34□□□□□ -0.59
RTN3-208ENST00000537981 A0A1B0GTW7 788 aa11.34□□□□□ -0.59
RTN3-208ENST00000537981 P4HA2O15460 535 aa11.34□□□□□ -0.59
RTN3-208ENST00000537981 EDF1O60869 148 aaKnown RBP11.34□□□□□ -0.59
RTN3-208ENST00000537981 PDE5AO76074 875 aa11.34□□□□□ -0.59
RTN3-208ENST00000537981 SORBS2O94875 1100 aaKnown RBP11.34□□□□□ -0.59
RTN3-208ENST00000537981 TFAP2AP05549 437 aa11.34□□□□□ -0.59
RTN3-208ENST00000537981 BCRP11274 1271 aa11.34□□□□□ -0.59
RTN3-208ENST00000537981 ATP6V1B1P15313 513 aa11.34□□□□□ -0.59
RTN3-208ENST00000537981 PORP16435 677 aaPredicted RBP11.34□□□□□ -0.59
RTN3-208ENST00000537981 ZFXP17010 805 aaPredicted RBP11.34□□□□□ -0.59
RTN3-208ENST00000537981 SLC1A5Q15758 541 aa11.34□□□□□ -0.59
RTN3-208ENST00000537981 NADK2Q4G0N4 442 aa11.34□□□□□ -0.59
RTN3-208ENST00000537981 C1orf141Q5JVX7 400 aa11.34□□□□□ -0.59
RTN3-208ENST00000537981 CABP7Q86V35 215 aa11.34□□□□□ -0.59
RTN3-208ENST00000537981 SYNE4Q8N205 404 aa11.34□□□□□ -0.59
RTN3-208ENST00000537981 MAGEB6Q8N7X4 407 aa11.34□□□□□ -0.59
RTN3-208ENST00000537981 FNDC8Q8TC99 324 aa11.34□□□□□ -0.59
RTN3-208ENST00000537981 JDP2Q8WYK2 163 aa11.34□□□□□ -0.59
RTN3-208ENST00000537981 LZICQ8WZA0 190 aa11.34□□□□□ -0.59
RTN3-208ENST00000537981 MCUR1Q96AQ8 359 aa11.34□□□□□ -0.59
RTN3-208ENST00000537981 PRICKLE1Q96MT3 831 aaPredicted RBP11.34□□□□□ -0.59
RTN3-208ENST00000537981 KLHL4Q9C0H6 718 aa11.34□□□□□ -0.59
RTN3-208ENST00000537981 STMN4Q9H169 189 aaPredicted RBP11.34□□□□□ -0.59
RTN3-208ENST00000537981 ARHGEF4Q9NR80 690 aa11.34□□□□□ -0.59
RTN3-208ENST00000537981 LARSQ9P2J5 1176 aaKnown RBP11.34□□□□□ -0.59
RTN3-208ENST00000537981 RGS17Q9UGC6 210 aaPredicted RBP11.34□□□□□ -0.59
RTN3-208ENST00000537981 SPATA31A6Q5VVP1 1343 aa11.34□□□□□ -0.59
RTN3-208ENST00000537981 MINDY4BA8MYZ0 360 aa11.33□□□□□ -0.6
RTN3-208ENST00000537981 PIAS1O75925 651 aa11.33□□□□□ -0.6
RTN3-208ENST00000537981 DCTN3O75935 186 aa11.33□□□□□ -0.6
RTN3-208ENST00000537981 VCAM1P19320 739 aa11.33□□□□□ -0.6
RTN3-208ENST00000537981 CRABP2P29373 138 aa11.33□□□□□ -0.6
RTN3-208ENST00000537981 RPA3P35244 121 aaPredicted RBP11.33□□□□□ -0.6
RTN3-208ENST00000537981 PHKA1P46020 1223 aa11.33□□□□□ -0.6
RTN3-208ENST00000537981 GALCP54803 685 aa11.33□□□□□ -0.6
RTN3-208ENST00000537981 STRN3Q13033 797 aa11.33□□□□□ -0.6
RTN3-208ENST00000537981 TMED2Q15363 201 aa11.33□□□□□ -0.6
RTN3-208ENST00000537981 MYLK3Q32MK0 819 aa11.33□□□□□ -0.6
RTN3-208ENST00000537981 CCDC137Q6PK04 289 aaKnown RBP11.33□□□□□ -0.6
RTN3-208ENST00000537981 B3GNT6Q6ZMB0 384 aa11.33□□□□□ -0.6
RTN3-208ENST00000537981 NLRX1Q86UT6 975 aa11.33□□□□□ -0.6
RTN3-208ENST00000537981 CPNE9Q8IYJ1 553 aa11.33□□□□□ -0.6
RTN3-208ENST00000537981 OLIG1Q8TAK6 271 aa11.33□□□□□ -0.6
RTN3-208ENST00000537981 SLC35G2Q8TBE7 412 aa11.33□□□□□ -0.6
RTN3-208ENST00000537981 SDR42E1Q8WUS8 393 aa11.33□□□□□ -0.6
RTN3-208ENST00000537981 ZNF512BQ96KM6 892 aaPredicted RBP11.33□□□□□ -0.6
RTN3-208ENST00000537981 SPC25Q9HBM1 224 aa11.33□□□□□ -0.6
RTN3-208ENST00000537981 ALG13Q9NP73 1137 aaKnown RBP11.33□□□□□ -0.6
RTN3-208ENST00000537981 NKIRAS1Q9NYS0 192 aa11.33□□□□□ -0.6
RTN3-208ENST00000537981 AMFRQ9UKV5 643 aa11.33□□□□□ -0.6
RTN3-208ENST00000537981 A0A0G2JND7 137 aa11.33□□□□□ -0.6
RTN3-208ENST00000537981 XPOTO43592 962 aaKnown RBP11.33□□□□□ -0.6
RTN3-208ENST00000537981 DCTN2Q13561 401 aaKnown RBP11.33□□□□□ -0.6
RTN3-208ENST00000537981 DPY19L2P1Q6NXN4 242 aa11.33□□□□□ -0.6
RTN3-208ENST00000537981 RIPOR1Q6ZS17 1223 aa11.33□□□□□ -0.6
RTN3-208ENST00000537981 ACAD11Q709F0 780 aa11.33□□□□□ -0.6
RTN3-208ENST00000537981 EPM2AIP1Q7L775 607 aaPredicted RBP11.33□□□□□ -0.6
RTN3-208ENST00000537981 FAM186BQ8IYM0 893 aa11.33□□□□□ -0.6
RTN3-208ENST00000537981 VPS52Q8N1B4 723 aa11.33□□□□□ -0.6
RTN3-208ENST00000537981 TTC30BQ8N4P2 665 aa11.33□□□□□ -0.6
RTN3-208ENST00000537981 ART4Q93070 314 aa11.33□□□□□ -0.6
RTN3-208ENST00000537981 TINF2Q9BSI4 451 aa11.33□□□□□ -0.6
RTN3-208ENST00000537981 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.33□□□□□ -0.6
RTN3-208ENST00000537981 EMILIN3Q9NT22 766 aa11.33□□□□□ -0.6
RTN3-208ENST00000537981 FAIMQ9NVQ4 179 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms