RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 LSM14BQ9BX40 385 aaKnown RBP16.94■□□□□ 0.3
SFSWAP-206ENST00000537582 FAM207AQ9NSI2 230 aaPredicted RBP16.94■□□□□ 0.3
SFSWAP-206ENST00000537582 CNTN3Q9P232 1028 aa16.94■□□□□ 0.3
SFSWAP-206ENST00000537582 TUBGCP4Q9UGJ1 667 aa16.94■□□□□ 0.3
SFSWAP-206ENST00000537582 A0A1W2PQC6 194 aa16.93■□□□□ 0.3
SFSWAP-206ENST00000537582 RNF225M0QZC1 329 aaPredicted RBP16.93■□□□□ 0.3
SFSWAP-206ENST00000537582 PTGESO14684 152 aa16.93■□□□□ 0.3
SFSWAP-206ENST00000537582 ZNF623O75123 536 aa16.93■□□□□ 0.3
SFSWAP-206ENST00000537582 FGFR1P11362 822 aa16.93■□□□□ 0.3
SFSWAP-206ENST00000537582 PON1P27169 355 aa16.93■□□□□ 0.3
SFSWAP-206ENST00000537582 ENPEPQ07075 957 aa16.93■□□□□ 0.3
SFSWAP-206ENST00000537582 BIRC3Q13489 604 aa16.93■□□□□ 0.3
SFSWAP-206ENST00000537582 HSP90AA2PQ14568 343 aaPredicted RBP16.93■□□□□ 0.3
SFSWAP-206ENST00000537582 SPECC1LQ69YQ0 1117 aa16.93■□□□□ 0.3
SFSWAP-206ENST00000537582 KRT39Q6A163 491 aa16.93■□□□□ 0.3
SFSWAP-206ENST00000537582 MFSD5Q6N075 450 aa16.93■□□□□ 0.3
SFSWAP-206ENST00000537582 GJB7Q6PEY0 223 aa16.93■□□□□ 0.3
SFSWAP-206ENST00000537582 SLC24A5Q71RS6 500 aa16.93■□□□□ 0.3
SFSWAP-206ENST00000537582 GSTCDQ8NEC7 633 aa16.93■□□□□ 0.3
SFSWAP-206ENST00000537582 LMO3Q8TAP4 145 aa16.93■□□□□ 0.3
SFSWAP-206ENST00000537582 ANP32BQ92688 251 aaKnown RBP16.93■□□□□ 0.3
SFSWAP-206ENST00000537582 PI4K2AQ9BTU6 479 aa16.93■□□□□ 0.3
SFSWAP-206ENST00000537582 FTHL17Q9BXU8 183 aa16.93■□□□□ 0.3
SFSWAP-206ENST00000537582 INTS2Q9H0H0 1204 aaKnown RBP16.93■□□□□ 0.3
SFSWAP-206ENST00000537582 SIX2Q9NPC8 291 aa16.93■□□□□ 0.3
SFSWAP-206ENST00000537582 MIOSQ9NXC5 875 aa16.93■□□□□ 0.3
SFSWAP-206ENST00000537582 AJAP1Q9UKB5 411 aaPredicted RBP16.93■□□□□ 0.3
SFSWAP-206ENST00000537582 SMIM28A0A1B0GU29 152 aa16.92■□□□□ 0.3
SFSWAP-206ENST00000537582 NOL4O94818 638 aa16.92■□□□□ 0.3
SFSWAP-206ENST00000537582 GTF2H1P32780 548 aa16.92■□□□□ 0.3
SFSWAP-206ENST00000537582 RAB27AP51159 221 aa16.92■□□□□ 0.3
SFSWAP-206ENST00000537582 FAM189BP81408 668 aa16.92■□□□□ 0.3
SFSWAP-206ENST00000537582 LRMPQ12912 555 aa16.92■□□□□ 0.3
SFSWAP-206ENST00000537582 ARID5BQ14865 1188 aa16.92■□□□□ 0.3
SFSWAP-206ENST00000537582 TMEM132DQ14C87 1099 aa16.92■□□□□ 0.3
SFSWAP-206ENST00000537582 EXOC3L4Q17RC7 722 aa16.92■□□□□ 0.3
SFSWAP-206ENST00000537582 XKR4Q5GH76 650 aa16.92■□□□□ 0.3
SFSWAP-206ENST00000537582 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.92■□□□□ 0.3
SFSWAP-206ENST00000537582 GBP6Q6ZN66 633 aa16.92■□□□□ 0.3
SFSWAP-206ENST00000537582 TRAPPC11Q7Z392 1133 aa16.92■□□□□ 0.3
SFSWAP-206ENST00000537582 USP37Q86T82 979 aa16.92■□□□□ 0.3
SFSWAP-206ENST00000537582 C1orf127Q8N9H9 656 aa16.92■□□□□ 0.3
SFSWAP-206ENST00000537582 BADQ92934 168 aa16.92■□□□□ 0.3
SFSWAP-206ENST00000537582 ASB7Q9H672 318 aa16.92■□□□□ 0.3
SFSWAP-206ENST00000537582 PLEKHA5Q9HAU0 1116 aa16.92■□□□□ 0.3
SFSWAP-206ENST00000537582 CACNG4Q9UBN1 327 aa16.92■□□□□ 0.3
SFSWAP-206ENST00000537582 ZMYND8Q9ULU4 1186 aaPredicted RBP16.92■□□□□ 0.3
SFSWAP-206ENST00000537582 ARL5CA6NH57 179 aa16.91■□□□□ 0.3
SFSWAP-206ENST00000537582 STX10O60499 249 aa16.91■□□□□ 0.3
SFSWAP-206ENST00000537582 PARNO95453 639 aaKnown RBP16.91■□□□□ 0.3
SFSWAP-206ENST00000537582 CST3P01034 146 aaPredicted RBP16.91■□□□□ 0.3
SFSWAP-206ENST00000537582 HLA-DRAP01903 254 aa16.91■□□□□ 0.3
SFSWAP-206ENST00000537582 GYPCP04921 128 aa16.91■□□□□ 0.3
SFSWAP-206ENST00000537582 TMEM191BP0C7N4 346 aa16.91■□□□□ 0.3
SFSWAP-206ENST00000537582 GATMP50440 423 aa16.91■□□□□ 0.3
SFSWAP-206ENST00000537582 SCNN1GP51170 649 aa16.91■□□□□ 0.3
SFSWAP-206ENST00000537582 POU5F1Q01860 360 aaKnown RBP16.91■□□□□ 0.3
SFSWAP-206ENST00000537582 SOX4Q06945 474 aaPredicted RBP16.91■□□□□ 0.3
SFSWAP-206ENST00000537582 TBX2Q13207 712 aaPredicted RBP16.91■□□□□ 0.3
SFSWAP-206ENST00000537582 SURF1Q15526 300 aa16.91■□□□□ 0.3
SFSWAP-206ENST00000537582 DUOXA2Q1HG44 320 aa16.91■□□□□ 0.3
SFSWAP-206ENST00000537582 TRIM65Q6PJ69 517 aa16.91■□□□□ 0.3
SFSWAP-206ENST00000537582 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.91■□□□□ 0.3
SFSWAP-206ENST00000537582 GPIHBP1Q8IV16 184 aa16.91■□□□□ 0.3
SFSWAP-206ENST00000537582 CXorf38Q8TB03 319 aa16.91■□□□□ 0.3
SFSWAP-206ENST00000537582 CPLX3Q8WVH0 158 aa16.91■□□□□ 0.3
SFSWAP-206ENST00000537582 APBB2Q92870 758 aa16.91■□□□□ 0.3
SFSWAP-206ENST00000537582 GOLGA2P5Q9HBQ8 144 aa16.91■□□□□ 0.3
SFSWAP-206ENST00000537582 SIX4Q9UIU6 781 aa16.91■□□□□ 0.3
SFSWAP-206ENST00000537582 RALGAPA2Q2PPJ7 1873 aa16.91■□□□□ 0.3
SFSWAP-206ENST00000537582 GTPBP10A4D1E9 387 aaKnown RBP16.9■□□□□ 0.3
SFSWAP-206ENST00000537582 RFC2P35250 354 aa16.9■□□□□ 0.3
SFSWAP-206ENST00000537582 PIK3CAP42336 1068 aa16.9■□□□□ 0.3
SFSWAP-206ENST00000537582 FXR1P51114 621 aaKnown RBP eCLIP16.9■□□□□ 0.3
SFSWAP-206ENST00000537582 EPHB4P54760 987 aa16.9■□□□□ 0.3
SFSWAP-206ENST00000537582 ZBTB6Q15916 424 aa16.9■□□□□ 0.3
SFSWAP-206ENST00000537582 CLLU1OSQ5K130 101 aa16.9■□□□□ 0.3
SFSWAP-206ENST00000537582 SPOPLQ6IQ16 392 aa16.9■□□□□ 0.3
SFSWAP-206ENST00000537582 CNKSR3Q6P9H4 555 aa16.9■□□□□ 0.3
SFSWAP-206ENST00000537582 C16orf59Q7L2K0 433 aa16.9■□□□□ 0.3
SFSWAP-206ENST00000537582 TMCO2Q7Z6W1 182 aaPredicted RBP16.9■□□□□ 0.3
SFSWAP-206ENST00000537582 ARHGEF19Q8IW93 802 aa16.9■□□□□ 0.3
SFSWAP-206ENST00000537582 TNS4Q8IZW8 715 aa16.9■□□□□ 0.3
SFSWAP-206ENST00000537582 TMEM199Q8N511 208 aa16.9■□□□□ 0.3
SFSWAP-206ENST00000537582 EHBP1Q8NDI1 1231 aa16.9■□□□□ 0.3
SFSWAP-206ENST00000537582 FBXL13Q8NEE6 735 aa16.9■□□□□ 0.3
SFSWAP-206ENST00000537582 PPP1R9BQ96SB3 815 aa16.9■□□□□ 0.3
SFSWAP-206ENST00000537582 GANQ9H2C0 597 aa16.9■□□□□ 0.3
SFSWAP-206ENST00000537582 RSAD1Q9HA92 442 aa16.9■□□□□ 0.3
SFSWAP-206ENST00000537582 C1orf112Q9NSG2 853 aa16.9■□□□□ 0.3
SFSWAP-206ENST00000537582 RAB20Q9NX57 234 aa16.9■□□□□ 0.3
SFSWAP-206ENST00000537582 INPP5FQ9Y2H2 1132 aa16.9■□□□□ 0.3
SFSWAP-206ENST00000537582 COQ4Q9Y3A0 265 aa16.9■□□□□ 0.3
SFSWAP-206ENST00000537582 C2CD2Q9Y426 696 aa16.9■□□□□ 0.3
SFSWAP-206ENST00000537582 CITO14578 2027 aa16.9■□□□□ 0.3
SFSWAP-206ENST00000537582 ITIH6Q6UXX5 1313 aa16.9■□□□□ 0.3
SFSWAP-206ENST00000537582 PPEF2O14830 753 aa16.89■□□□□ 0.3
SFSWAP-206ENST00000537582 N4BP1O75113 896 aaKnown RBP16.89■□□□□ 0.3
SFSWAP-206ENST00000537582 PHACTR2O75167 634 aa16.89■□□□□ 0.3
SFSWAP-206ENST00000537582 POMCP01189 267 aa16.89■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms