RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 PAK1Q13153 545 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 EIF4A2Q14240 407 aaKnown RBP3.96□□□□□ -1.78
MCF2-210ENST00000536274 NONOQ15233 471 aaKnown RBP eCLIP3.96□□□□□ -1.78
MCF2-210ENST00000536274 MCMDC2Q4G0Z9 681 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 DCAF6Q58WW2 860 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 PPP2R2DQ66LE6 453 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 PRR23BQ6ZRT6 265 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 NUDT18Q6ZVK8 323 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 NLRP10Q86W26 655 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 SLC38A6Q8IZM9 456 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 TTLL6Q8N841 843 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 ENDOVQ8N8Q3 282 aaKnown RBP3.96□□□□□ -1.78
MCF2-210ENST00000536274 ZFP28Q8NHY6 868 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 TBC1D16Q8TBP0 767 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 ACTRT2Q8TDY3 377 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 SUCLG2Q96I99 432 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 ZMAT2Q96NC0 199 aaKnown RBP3.96□□□□□ -1.78
MCF2-210ENST00000536274 RAB3IPQ96QF0 476 aaPredicted RBP3.96□□□□□ -1.78
MCF2-210ENST00000536274 EYA1Q99502 592 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 CCT7Q99832 543 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 ZKSCAN3Q9BRR0 538 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.96□□□□□ -1.78
MCF2-210ENST00000536274 SPZ1Q9BXG8 430 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 NT5C3AQ9H0P0 336 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 STOML1Q9UBI4 398 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 DCTN4Q9UJW0 460 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 FAF1Q9UNN5 650 aaPredicted RBP3.96□□□□□ -1.78
MCF2-210ENST00000536274 SLC12A7Q9Y666 1083 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 SLC4A4Q9Y6R1 1079 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 XDHP47989 1333 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 NUP98P52948 1817 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 PRAMEF22A3QJZ6 481 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 A8MX80 341 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 SH2B2O14492 632 aaPredicted RBP3.96□□□□□ -1.78
MCF2-210ENST00000536274 ADCY6O43306 1168 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 PRDM1O75626 825 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 PIAS1O75925 651 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 GJB6O95452 261 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 ACSL3O95573 720 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 TROVE2P10155 538 aaKnown RBP eCLIP3.96□□□□□ -1.78
MCF2-210ENST00000536274 HSPD1P10809 573 aaKnown RBP3.96□□□□□ -1.78
MCF2-210ENST00000536274 SLC5A2P31639 672 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 POLGP54098 1239 aaPredicted RBP3.96□□□□□ -1.78
MCF2-210ENST00000536274 NLRP5P59047 1200 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 SLC34A1Q06495 639 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 TFCP2Q12800 502 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 ZNF211Q13398 564 aaPredicted RBP3.96□□□□□ -1.78
MCF2-210ENST00000536274 TGFBIQ15582 683 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 ZNF174Q15697 407 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 EDRF1Q3B7T1 1238 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 PUS10Q3MIT2 529 aaKnown RBP3.96□□□□□ -1.78
MCF2-210ENST00000536274 NADK2Q4G0N4 442 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 SFT2D3Q587I9 215 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 KLC3Q6P597 504 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 INTS5Q6P9B9 1019 aaKnown RBP3.96□□□□□ -1.78
MCF2-210ENST00000536274 RNF19BQ6ZMZ0 732 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 RFPL4BQ6ZWI9 263 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 SAMD7Q7Z3H4 446 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 ZNF572Q7Z3I7 529 aaPredicted RBP3.96□□□□□ -1.78
MCF2-210ENST00000536274 TMPRSS6Q8IU80 811 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 SULF1Q8IWU6 871 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 PEX5LQ8IYB4 626 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 ALDH16A1Q8IZ83 802 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 TTC30BQ8N4P2 665 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 FNDC8Q8TC99 324 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 ZNF507Q8TCN5 953 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 TMIGD2Q96BF3 282 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 LRRC45Q96CN5 670 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 ZNF274Q96GC6 653 aaPredicted RBP3.96□□□□□ -1.78
MCF2-210ENST00000536274 TRIM47Q96LD4 638 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 UIMC1Q96RL1 719 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 FAM192AQ9GZU8 254 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 CUEDC2Q9H467 287 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 DCLRE1BQ9H816 532 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 ALG13Q9NP73 1137 aaKnown RBP3.96□□□□□ -1.78
MCF2-210ENST00000536274 WBP1LQ9NX94 342 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 KLHL14Q9P2G3 628 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 PGAP2Q9UHJ9 254 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 APPL1Q9UKG1 709 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 POU2F3Q9UKI9 436 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 PPM1HQ9ULR3 514 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 GNEQ9Y223 722 aaKnown RBP3.96□□□□□ -1.78
MCF2-210ENST00000536274 TMED5Q9Y3A6 229 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 ECM29Q5VYK3 1845 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 SLX4Q8IY92 1834 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 GOLGB1Q14789 3259 aaKnown RBP3.96□□□□□ -1.78
MCF2-210ENST00000536274 KANSL1LA0AUZ9 987 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 PP2D1A8MPX8 630 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 KRIT1O00522 736 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 ADAMTS3O15072 1205 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 CYP26A1O43174 497 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 WFS1O76024 890 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 S100BP04271 92 aaPredicted RBP3.96□□□□□ -1.78
MCF2-210ENST00000536274 IL4RP24394 825 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 WEE1P30291 646 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 ECE1P42892 770 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 PIP4K2AP48426 406 aaPredicted RBP3.96□□□□□ -1.78
MCF2-210ENST00000536274 CLK2P49760 499 aaKnown RBP3.96□□□□□ -1.78
MCF2-210ENST00000536274 RASSF2P50749 326 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 NOP14P78316 857 aaKnown RBP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms