RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 C3orf58Q8NDZ4 430 aa12.32□□□□□ -0.44
TNFRSF1A-208ENST00000536194 PPM1EQ8WY54 764 aa12.32□□□□□ -0.44
TNFRSF1A-208ENST00000536194 TMEM169Q96HH4 297 aa12.32□□□□□ -0.44
TNFRSF1A-208ENST00000536194 FAM213AQ9BRX8 229 aa12.32□□□□□ -0.44
TNFRSF1A-208ENST00000536194 ZBP1Q9H171 429 aa12.32□□□□□ -0.44
TNFRSF1A-208ENST00000536194 KCTD10Q9H3F6 313 aa12.32□□□□□ -0.44
TNFRSF1A-208ENST00000536194 TUBGCP4Q9UGJ1 667 aa12.32□□□□□ -0.44
TNFRSF1A-208ENST00000536194 CARNS1A5YM72 827 aa12.31□□□□□ -0.44
TNFRSF1A-208ENST00000536194 CLIC2O15247 247 aa12.31□□□□□ -0.44
TNFRSF1A-208ENST00000536194 EXTL3O43909 919 aa12.31□□□□□ -0.44
TNFRSF1A-208ENST00000536194 NFICP08651 508 aa12.31□□□□□ -0.44
TNFRSF1A-208ENST00000536194 GTF2F1P35269 517 aaKnown RBP eCLIP12.31□□□□□ -0.441e-6■■■■□ 22.9
TNFRSF1A-208ENST00000536194 CLCNKBP51801 687 aa12.31□□□□□ -0.44
TNFRSF1A-208ENST00000536194 GUCY2FP51841 1108 aa12.31□□□□□ -0.44
TNFRSF1A-208ENST00000536194 KRT17Q04695 432 aa12.31□□□□□ -0.44
TNFRSF1A-208ENST00000536194 HSP90AA2PQ14568 343 aaPredicted RBP12.31□□□□□ -0.44
TNFRSF1A-208ENST00000536194 UPP1Q16831 310 aa12.31□□□□□ -0.44
TNFRSF1A-208ENST00000536194 TIGD5Q53EQ6 642 aa12.31□□□□□ -0.44
TNFRSF1A-208ENST00000536194 PLPP4Q5VZY2 271 aa12.31□□□□□ -0.44
TNFRSF1A-208ENST00000536194 JADE1Q6IE81 842 aa12.31□□□□□ -0.44
TNFRSF1A-208ENST00000536194 VPS52Q8N1B4 723 aa12.31□□□□□ -0.44
TNFRSF1A-208ENST00000536194 HASPINQ8TF76 798 aa12.31□□□□□ -0.44
TNFRSF1A-208ENST00000536194 FAM212AQ96EL1 285 aa12.31□□□□□ -0.44
TNFRSF1A-208ENST00000536194 KIF12Q96FN5 646 aa12.31□□□□□ -0.44
TNFRSF1A-208ENST00000536194 GSDMAQ96QA5 445 aa12.31□□□□□ -0.44
TNFRSF1A-208ENST00000536194 TCF25Q9BQ70 676 aa12.31□□□□□ -0.44
TNFRSF1A-208ENST00000536194 GPR62Q9BZJ7 368 aa12.31□□□□□ -0.44
TNFRSF1A-208ENST00000536194 NSUN3Q9H649 340 aaKnown RBP12.31□□□□□ -0.44
TNFRSF1A-208ENST00000536194 PRDM6Q9NQX0 595 aa12.31□□□□□ -0.44
TNFRSF1A-208ENST00000536194 HSPBP1Q9NZL4 362 aa12.31□□□□□ -0.44
TNFRSF1A-208ENST00000536194 ADAM28Q9UKQ2 775 aa12.31□□□□□ -0.44
TNFRSF1A-208ENST00000536194 MAPK8IP1Q9UQF2 711 aa12.31□□□□□ -0.44
TNFRSF1A-208ENST00000536194 SCN1AP35498 2009 aa12.31□□□□□ -0.44
TNFRSF1A-208ENST00000536194 PLXNA3P51805 1871 aa12.31□□□□□ -0.44
TNFRSF1A-208ENST00000536194 TSC2P49815 1807 aa12.3□□□□□ -0.44
TNFRSF1A-208ENST00000536194 HIDE1A8MVS5 230 aa12.3□□□□□ -0.44
TNFRSF1A-208ENST00000536194 TMEM189-UBE2V1I3L0A0 370 aa12.3□□□□□ -0.44
TNFRSF1A-208ENST00000536194 HYAL1Q12794 435 aa12.3□□□□□ -0.44
TNFRSF1A-208ENST00000536194 FUT10Q6P4F1 479 aa12.3□□□□□ -0.44
TNFRSF1A-208ENST00000536194 CBWD2Q8IUF1 395 aa12.3□□□□□ -0.44
TNFRSF1A-208ENST00000536194 BRSK2Q8IWQ3 736 aa12.3□□□□□ -0.44
TNFRSF1A-208ENST00000536194 C12orf56Q8IXR9 622 aa12.3□□□□□ -0.44
TNFRSF1A-208ENST00000536194 EFCAB13Q8IY85 973 aa12.3□□□□□ -0.44
TNFRSF1A-208ENST00000536194 GPD1LQ8N335 351 aa12.3□□□□□ -0.44
TNFRSF1A-208ENST00000536194 AUTS2Q8WXX7 1259 aa12.3□□□□□ -0.44
TNFRSF1A-208ENST00000536194 SMARCE1Q969G3 411 aa12.3□□□□□ -0.44
TNFRSF1A-208ENST00000536194 CCDC47Q96A33 483 aaKnown RBP12.3□□□□□ -0.44
TNFRSF1A-208ENST00000536194 CCDC34Q96HJ3 373 aa12.3□□□□□ -0.44
TNFRSF1A-208ENST00000536194 FAM84AQ96KN4 292 aa12.3□□□□□ -0.44
TNFRSF1A-208ENST00000536194 B3GALT6Q96L58 329 aa12.3□□□□□ -0.44
TNFRSF1A-208ENST00000536194 FBXL18Q96ME1 805 aa12.3□□□□□ -0.44
TNFRSF1A-208ENST00000536194 COLEC11Q9BWP8 271 aa12.3□□□□□ -0.44
TNFRSF1A-208ENST00000536194 ENTPD7Q9NQZ7 604 aa12.3□□□□□ -0.44
TNFRSF1A-208ENST00000536194 SLC38A7Q9NVC3 462 aa12.3□□□□□ -0.44
TNFRSF1A-208ENST00000536194 PUF60Q9UHX1 559 aaKnown RBP12.3□□□□□ -0.44
TNFRSF1A-208ENST00000536194 MAN1B1Q9UKM7 699 aa12.3□□□□□ -0.44
TNFRSF1A-208ENST00000536194 C2orf71A6NGG8 1288 aa12.29□□□□□ -0.44
TNFRSF1A-208ENST00000536194 PPEF2O14830 753 aa12.29□□□□□ -0.44
TNFRSF1A-208ENST00000536194 KIAA0391O15091 583 aaKnown RBP12.29□□□□□ -0.44
TNFRSF1A-208ENST00000536194 B3GAT3O94766 335 aa12.29□□□□□ -0.44
TNFRSF1A-208ENST00000536194 LDHAP00338 332 aaKnown RBP12.29□□□□□ -0.44
TNFRSF1A-208ENST00000536194 SOD2P04179 222 aa12.29□□□□□ -0.44
TNFRSF1A-208ENST00000536194 CTSAP10619 480 aa12.29□□□□□ -0.44
TNFRSF1A-208ENST00000536194 BMP6P22004 513 aa12.29□□□□□ -0.44
TNFRSF1A-208ENST00000536194 PRCPP42785 496 aa12.29□□□□□ -0.44
TNFRSF1A-208ENST00000536194 CYP2J2P51589 502 aa12.29□□□□□ -0.44
TNFRSF1A-208ENST00000536194 POU5F1Q01860 360 aaKnown RBP12.29□□□□□ -0.44
TNFRSF1A-208ENST00000536194 CAMK4Q16566 473 aa12.29□□□□□ -0.44
TNFRSF1A-208ENST00000536194 SCARA3Q6AZY7 606 aa12.29□□□□□ -0.44
TNFRSF1A-208ENST00000536194 ISM2Q6H9L7 571 aa12.29□□□□□ -0.44
TNFRSF1A-208ENST00000536194 TMC7Q7Z402 723 aa12.29□□□□□ -0.44
TNFRSF1A-208ENST00000536194 GUF1Q8N442 669 aaKnown RBP12.29□□□□□ -0.44
TNFRSF1A-208ENST00000536194 MICAL1Q8TDZ2 1067 aa12.29□□□□□ -0.44
TNFRSF1A-208ENST00000536194 NOC3LQ8WTT2 800 aaKnown RBP12.29□□□□□ -0.44
TNFRSF1A-208ENST00000536194 UROC1Q96N76 676 aa12.29□□□□□ -0.44
TNFRSF1A-208ENST00000536194 GBP4Q96PP9 640 aa12.29□□□□□ -0.44
TNFRSF1A-208ENST00000536194 HERC2P3Q9BVR0 1158 aa12.29□□□□□ -0.44
TNFRSF1A-208ENST00000536194 ASB7Q9H672 318 aa12.29□□□□□ -0.44
TNFRSF1A-208ENST00000536194 PDE11AQ9HCR9 933 aa12.29□□□□□ -0.44
TNFRSF1A-208ENST00000536194 RBAKQ9NYW8 714 aaPredicted RBP12.29□□□□□ -0.44
TNFRSF1A-208ENST00000536194 PTPRJQ12913 1337 aa12.29□□□□□ -0.44
TNFRSF1A-208ENST00000536194 PRUNE2Q8WUY3 3088 aa12.28□□□□□ -0.44
TNFRSF1A-208ENST00000536194 PODXLO00592 558 aa12.28□□□□□ -0.44
TNFRSF1A-208ENST00000536194 PDXKO00764 312 aa12.28□□□□□ -0.44
TNFRSF1A-208ENST00000536194 PER2O15055 1255 aa12.28□□□□□ -0.44
TNFRSF1A-208ENST00000536194 LINC01565O15544 149 aa12.28□□□□□ -0.44
TNFRSF1A-208ENST00000536194 LILRB3O75022 631 aa12.28□□□□□ -0.44
TNFRSF1A-208ENST00000536194 TADA2AO75478 443 aa12.28□□□□□ -0.44
TNFRSF1A-208ENST00000536194 IL18RAPO95256 599 aa12.28□□□□□ -0.44
TNFRSF1A-208ENST00000536194 SMC2O95347 1197 aa12.28□□□□□ -0.44
TNFRSF1A-208ENST00000536194 CD44P16070 742 aaKnown RBP12.28□□□□□ -0.44
TNFRSF1A-208ENST00000536194 CYP3A5P20815 502 aa12.28□□□□□ -0.44
TNFRSF1A-208ENST00000536194 LRPAP1P30533 357 aa12.28□□□□□ -0.44
TNFRSF1A-208ENST00000536194 BRCC3P46736 316 aa12.28□□□□□ -0.44
TNFRSF1A-208ENST00000536194 NRIP1P48552 1158 aa12.28□□□□□ -0.44
TNFRSF1A-208ENST00000536194 SNRPFP62306 86 aaKnown RBP12.28□□□□□ -0.44
TNFRSF1A-208ENST00000536194 RBM10P98175 930 aaKnown RBP12.28□□□□□ -0.44
TNFRSF1A-208ENST00000536194 SMC1AQ14683 1233 aaKnown RBP12.28□□□□□ -0.44
TNFRSF1A-208ENST00000536194 COL19A1Q14993 1142 aa12.28□□□□□ -0.44
TNFRSF1A-208ENST00000536194 TMEM132DQ14C87 1099 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms