RNA–Protein interactions for RNA: ENST00000533778.6

CHEK1-215, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-215ENST00000533778 COBLL1Q53SF7 1204 aa21.53■■□□□ 1.04
CHEK1-215ENST00000533778 DCLRE1AQ6PJP8 1040 aa21.53■■□□□ 1.04
CHEK1-215ENST00000533778 NT5DC4Q86YG4 428 aa21.53■■□□□ 1.04
CHEK1-215ENST00000533778 BRSK2Q8IWQ3 736 aa21.53■■□□□ 1.04
CHEK1-215ENST00000533778 XXYLT1Q8NBI6 393 aa21.53■■□□□ 1.04
CHEK1-215ENST00000533778 NOC3LQ8WTT2 800 aaKnown RBP21.53■■□□□ 1.04
CHEK1-215ENST00000533778 TMEM174Q8WUU8 243 aa21.53■■□□□ 1.04
CHEK1-215ENST00000533778 ERCC4Q92889 916 aaPredicted RBP21.53■■□□□ 1.04
CHEK1-215ENST00000533778 PPP2R3CQ969Q6 453 aa21.53■■□□□ 1.04
CHEK1-215ENST00000533778 NGRNQ9NPE2 291 aaKnown RBP21.53■■□□□ 1.04
CHEK1-215ENST00000533778 MAPK8IP1Q9UQF2 711 aa21.53■■□□□ 1.04
CHEK1-215ENST00000533778 C2CD2Q9Y426 696 aa21.53■■□□□ 1.04
CHEK1-215ENST00000533778 RALGAPA2Q2PPJ7 1873 aa21.52■■□□□ 1.04
CHEK1-215ENST00000533778 GOLGA8IPA6NC78 632 aa21.52■■□□□ 1.04
CHEK1-215ENST00000533778 GOLGA8JA6NMD2 632 aa21.52■■□□□ 1.04
CHEK1-215ENST00000533778 CLIC2O15247 247 aa21.52■■□□□ 1.04
CHEK1-215ENST00000533778 SURF1Q15526 300 aa21.52■■□□□ 1.04
CHEK1-215ENST00000533778 CAMK4Q16566 473 aa21.52■■□□□ 1.04
CHEK1-215ENST00000533778 TMEM173Q86WV6 379 aaPredicted RBP21.52■■□□□ 1.04
CHEK1-215ENST00000533778 SLC9A9Q8IVB4 645 aa21.52■■□□□ 1.04
CHEK1-215ENST00000533778 BEST2Q8NFU1 509 aa21.52■■□□□ 1.04
CHEK1-215ENST00000533778 FBXL18Q96ME1 805 aa21.52■■□□□ 1.04
CHEK1-215ENST00000533778 CLSTN2Q9H4D0 955 aa21.52■■□□□ 1.04
CHEK1-215ENST00000533778 NSUN3Q9H649 340 aaKnown RBP21.52■■□□□ 1.04
CHEK1-215ENST00000533778 MARCH5Q9NX47 278 aa21.52■■□□□ 1.04
CHEK1-215ENST00000533778 MAN1B1Q9UKM7 699 aa21.52■■□□□ 1.04
CHEK1-215ENST00000533778 ADAM28Q9UKQ2 775 aa21.52■■□□□ 1.04
CHEK1-215ENST00000533778 TRAF3IP3Q9Y228 551 aa21.52■■□□□ 1.04
CHEK1-215ENST00000533778 EXOC3O60645 756 aa21.51■■□□□ 1.03
CHEK1-215ENST00000533778 B3GAT3O94766 335 aa21.51■■□□□ 1.03
CHEK1-215ENST00000533778 DNAJB1P25685 340 aa21.51■■□□□ 1.03
CHEK1-215ENST00000533778 RPL13P26373 211 aaKnown RBP21.51■■□□□ 1.03
CHEK1-215ENST00000533778 CYP2J2P51589 502 aa21.51■■□□□ 1.03
CHEK1-215ENST00000533778 ELAVL2Q12926 359 aaKnown RBP21.51■■□□□ 1.03
CHEK1-215ENST00000533778 TMEM132DQ14C87 1099 aa21.51■■□□□ 1.03
CHEK1-215ENST00000533778 ZBTB6Q15916 424 aa21.51■■□□□ 1.03
CHEK1-215ENST00000533778 UPP1Q16831 310 aa21.51■■□□□ 1.03
CHEK1-215ENST00000533778 TMC7Q7Z402 723 aa21.51■■□□□ 1.03
CHEK1-215ENST00000533778 VPS52Q8N1B4 723 aa21.51■■□□□ 1.03
CHEK1-215ENST00000533778 TRIML1Q8N9V2 468 aa21.51■■□□□ 1.03
CHEK1-215ENST00000533778 TCF25Q9BQ70 676 aa21.51■■□□□ 1.03
CHEK1-215ENST00000533778 ENTPD7Q9NQZ7 604 aa21.51■■□□□ 1.03
CHEK1-215ENST00000533778 KIAA1468Q9P260 1216 aa21.51■■□□□ 1.03
CHEK1-215ENST00000533778 SSX2IPQ9Y2D8 614 aa21.51■■□□□ 1.03
CHEK1-215ENST00000533778 TMEM189-UBE2V1I3L0A0 370 aa21.5■■□□□ 1.03
CHEK1-215ENST00000533778 TULP1O00294 542 aaPredicted RBP21.5■■□□□ 1.03
CHEK1-215ENST00000533778 TRAPPC3O43617 180 aa21.5■■□□□ 1.03
CHEK1-215ENST00000533778 MBD3O95983 291 aa21.5■■□□□ 1.03
CHEK1-215ENST00000533778 CLCNKBP51801 687 aa21.5■■□□□ 1.03
CHEK1-215ENST00000533778 SPAG1Q07617 926 aa21.5■■□□□ 1.03
CHEK1-215ENST00000533778 CAMK1Q14012 370 aa21.5■■□□□ 1.03
CHEK1-215ENST00000533778 SMC1AQ14683 1233 aaKnown RBP21.5■■□□□ 1.03
CHEK1-215ENST00000533778 SNRNP35Q16560 246 aaKnown RBP21.5■■□□□ 1.03
CHEK1-215ENST00000533778 NFIL3Q16649 462 aa21.5■■□□□ 1.03
CHEK1-215ENST00000533778 JADE1Q6IE81 842 aa21.5■■□□□ 1.03
CHEK1-215ENST00000533778 MICALL1Q8N3F8 863 aa21.5■■□□□ 1.03
CHEK1-215ENST00000533778 MAFAQ8NHW3 353 aaPredicted RBP21.5■■□□□ 1.03
CHEK1-215ENST00000533778 CACTINQ8WUQ7 758 aaKnown RBP21.5■■□□□ 1.03
CHEK1-215ENST00000533778 BCL7CQ8WUZ0 217 aaPredicted RBP21.5■■□□□ 1.03
CHEK1-215ENST00000533778 C18orf25Q96B23 403 aaPredicted RBP21.5■■□□□ 1.03
CHEK1-215ENST00000533778 NUP62CLQ9H1M0 184 aa21.5■■□□□ 1.03
CHEK1-215ENST00000533778 SZT2Q5T011 3432 aa21.5■■□□□ 1.03
CHEK1-215ENST00000533778 SF3B1O75533 1304 aaKnown RBP eCLIP21.5■■□□□ 1.03
CHEK1-215ENST00000533778 PODXLO00592 558 aa21.49■■□□□ 1.03
CHEK1-215ENST00000533778 FSCN2O14926 492 aa21.49■■□□□ 1.03
CHEK1-215ENST00000533778 KIF4AO95239 1232 aa21.49■■□□□ 1.03
CHEK1-215ENST00000533778 NR3C1P04150 777 aa21.49■■□□□ 1.03
CHEK1-215ENST00000533778 SOD2P04179 222 aa21.49■■□□□ 1.03
CHEK1-215ENST00000533778 LRPAP1P30533 357 aa21.49■■□□□ 1.03
CHEK1-215ENST00000533778 PRCPP42785 496 aa21.49■■□□□ 1.03
CHEK1-215ENST00000533778 ERVFC1P60507 584 aa21.49■■□□□ 1.03
CHEK1-215ENST00000533778 SOX4Q06945 474 aaPredicted RBP21.49■■□□□ 1.03
CHEK1-215ENST00000533778 MORC3Q14149 939 aa21.49■■□□□ 1.03
CHEK1-215ENST00000533778 SPATA1Q5VX52 437 aa21.49■■□□□ 1.03
CHEK1-215ENST00000533778 CBWD2Q8IUF1 395 aa21.49■■□□□ 1.03
CHEK1-215ENST00000533778 SMYD4Q8IYR2 804 aaPredicted RBP21.49■■□□□ 1.03
CHEK1-215ENST00000533778 RABGGTAQ92696 567 aa21.49■■□□□ 1.03
CHEK1-215ENST00000533778 TSG101Q99816 390 aa21.49■■□□□ 1.03
CHEK1-215ENST00000533778 PAAF1Q9BRP4 392 aa21.49■■□□□ 1.03
CHEK1-215ENST00000533778 GOLGA2P5Q9HBQ8 144 aa21.49■■□□□ 1.03
CHEK1-215ENST00000533778 DMAC2Q9NW81 257 aa21.49■■□□□ 1.03
CHEK1-215ENST00000533778 TUBGCP4Q9UGJ1 667 aa21.49■■□□□ 1.03
CHEK1-215ENST00000533778 CHD7Q9P2D1 2997 aa21.49■■□□□ 1.03
CHEK1-215ENST00000533778 PSMA7O14818 248 aa21.48■■□□□ 1.03
CHEK1-215ENST00000533778 NCK2O43639 380 aa21.48■■□□□ 1.03
CHEK1-215ENST00000533778 NFICP08651 508 aa21.48■■□□□ 1.03
CHEK1-215ENST00000533778 CTSAP10619 480 aa21.48■■□□□ 1.03
CHEK1-215ENST00000533778 PAX3P23760 479 aa21.48■■□□□ 1.03
CHEK1-215ENST00000533778 EDRF1Q3B7T1 1238 aa21.48■■□□□ 1.03
CHEK1-215ENST00000533778 KIAA1841Q6NSI8 718 aa21.48■■□□□ 1.03
CHEK1-215ENST00000533778 FUT10Q6P4F1 479 aa21.48■■□□□ 1.03
CHEK1-215ENST00000533778 ADSSL1Q8N142 457 aa21.48■■□□□ 1.03
CHEK1-215ENST00000533778 RDH13Q8NBN7 331 aa21.48■■□□□ 1.03
CHEK1-215ENST00000533778 ZSWIM2Q8NEG5 633 aa21.48■■□□□ 1.03
CHEK1-215ENST00000533778 DHTKD1Q96HY7 919 aaPredicted RBP21.48■■□□□ 1.03
CHEK1-215ENST00000533778 HERC2P3Q9BVR0 1158 aa21.48■■□□□ 1.03
CHEK1-215ENST00000533778 ZBP1Q9H171 429 aa21.48■■□□□ 1.03
CHEK1-215ENST00000533778 CACNG4Q9UBN1 327 aa21.48■■□□□ 1.03
CHEK1-215ENST00000533778 FRMD4BQ9Y2L6 1034 aa21.48■■□□□ 1.03
CHEK1-215ENST00000533778 NUB1Q9Y5A7 615 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms