RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 MFAP3LO75121 409 aa11.94□□□□□ -0.5
AMBRA1-211ENST00000533727 PPP6R3Q5H9R7 873 aaPredicted RBP11.94□□□□□ -0.5
AMBRA1-211ENST00000533727 FAM102AQ5T9C2 384 aaPredicted RBP11.94□□□□□ -0.5
AMBRA1-211ENST00000533727 C11orf70Q9BRQ4 267 aa11.94□□□□□ -0.5
AMBRA1-211ENST00000533727 RANBP17Q9H2T7 1088 aaKnown RBP11.94□□□□□ -0.5
AMBRA1-211ENST00000533727 TMEM51Q9NW97 253 aa11.94□□□□□ -0.5
AMBRA1-211ENST00000533727 KIAA1257Q9ULG3 409 aa11.94□□□□□ -0.5
AMBRA1-211ENST00000533727 AP3B1O00203 1094 aa11.94□□□□□ -0.5
AMBRA1-211ENST00000533727 PMLP29590 882 aa11.94□□□□□ -0.5
AMBRA1-211ENST00000533727 PAPOLAP51003 745 aaKnown RBP11.94□□□□□ -0.5
AMBRA1-211ENST00000533727 ATN1P54259 1190 aaPredicted RBP11.94□□□□□ -0.5
AMBRA1-211ENST00000533727 SARM1Q6SZW1 724 aa11.94□□□□□ -0.5
AMBRA1-211ENST00000533727 MPZL3Q6UWV2 235 aa11.94□□□□□ -0.5
AMBRA1-211ENST00000533727 CDKL3Q8IVW4 592 aaPredicted RBP11.94□□□□□ -0.5
AMBRA1-211ENST00000533727 TRIM42Q8IWZ5 723 aa11.94□□□□□ -0.5
AMBRA1-211ENST00000533727 TMEM199Q8N511 208 aa11.94□□□□□ -0.5
AMBRA1-211ENST00000533727 NIF3L1Q9GZT8 377 aa11.94□□□□□ -0.5
AMBRA1-211ENST00000533727 THEGQ9P2T0 379 aa11.94□□□□□ -0.5
AMBRA1-211ENST00000533727 ADAMTS1Q9UHI8 967 aa11.94□□□□□ -0.5
AMBRA1-211ENST00000533727 CYP2C8P10632 490 aa11.94□□□□□ -0.5
AMBRA1-211ENST00000533727 GARTP22102 1010 aa11.94□□□□□ -0.5
AMBRA1-211ENST00000533727 PLD1Q13393 1074 aa11.94□□□□□ -0.5
AMBRA1-211ENST00000533727 PDXDC1Q6P996 788 aa11.94□□□□□ -0.5
AMBRA1-211ENST00000533727 TRPM4Q8TD43 1214 aa11.94□□□□□ -0.5
AMBRA1-211ENST00000533727 KLHL8Q9P2G9 620 aaPredicted RBP11.94□□□□□ -0.5
AMBRA1-211ENST00000533727 CCDC188H7C350 402 aa11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 GSTA1P08263 222 aa11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 GSTA2P09210 222 aa11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 STMN1P16949 149 aa11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 SOX5P35711 763 aa11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 EPHB4P54760 987 aa11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 PTF1AQ7RTS3 328 aa11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 HSPH1Q92598 858 aa11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 KLHL29Q96CT2 875 aa11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 SEZ6LQ9BYH1 1024 aa11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 ENTPD7Q9NQZ7 604 aa11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 SCOCQ9UIL1 159 aa11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 ADAM21Q9UKJ8 722 aa11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 PCBP1Q15365 356 aaKnown RBP eCLIP11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 GRIK4Q16099 956 aa11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 PCGF5Q86SE9 256 aa11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 ADGRA1Q86SQ6 560 aa11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 PDIK1LQ8N165 341 aa11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 SLC35F6Q8N357 371 aa11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 FBXL16Q8N461 479 aa11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 INTS9Q9NV88 658 aaKnown RBP11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 TBX20Q9UMR3 447 aa11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 BCL9LQ86UU0 1499 aa11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 IRF6O14896 467 aa11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 SLC2A3P11169 496 aa11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 PAX3P23760 479 aa11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 ACOT2P49753 483 aa11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 RHBDL3P58872 404 aa11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 DYNLT1P63172 113 aa11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 BASP1P80723 227 aaKnown RBP11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 GUCY2DQ02846 1103 aa11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 FAM110CQ1W6H9 321 aa11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 MGAT5BQ3V5L5 792 aa11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 TDRD10Q5VZ19 366 aaKnown RBP11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 TTC23LQ6PF05 361 aa11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 TTC30AQ86WT1 665 aa11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 ZNF677Q86XU0 584 aa11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 C18orf8Q96DM3 657 aa11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 CHAMP1Q96JM3 812 aa11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 SEPT5Q99719 369 aaPredicted RBP11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 TRPC7Q9HCX4 862 aa11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 TLK1Q9UKI8 766 aa11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 TRPV2Q9Y5S1 764 aa11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 MON2Q7Z3U7 1717 aa11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 PLA2G6O60733 806 aa11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 TOM1L1O75674 476 aa11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 TRIM49P0CI25 452 aa11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 TRIM49CP0CI26 452 aa11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 POLE2P56282 527 aa11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 TAF11Q15544 211 aa11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 NFE2Q16621 373 aaPredicted RBP11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 HIBCHQ6NVY1 386 aaPredicted RBP11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 CATSPER3Q86XQ3 398 aa11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 SRRM1Q8IYB3 904 aaKnown RBP11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 MSRAQ9UJ68 235 aa11.93□□□□□ -0.5
AMBRA1-211ENST00000533727 MAPTP10636 758 aaKnown RBP11.92□□□□□ -0.5
AMBRA1-211ENST00000533727 SLMAPQ14BN4 828 aa11.92□□□□□ -0.5
AMBRA1-211ENST00000533727 IQCB1Q15051 598 aa11.92□□□□□ -0.5
AMBRA1-211ENST00000533727 ZNF280DQ6N043 979 aa11.92□□□□□ -0.5
AMBRA1-211ENST00000533727 UCMAQ8WVF2 138 aa11.92□□□□□ -0.5
AMBRA1-211ENST00000533727 KLRG1Q96E93 195 aa11.92□□□□□ -0.5
AMBRA1-211ENST00000533727 FSD1LQ9BXM9 530 aa11.92□□□□□ -0.5
AMBRA1-211ENST00000533727 AK9Q5TCS8 1911 aa11.92□□□□□ -0.5
AMBRA1-211ENST00000533727 TRIM49BA6NDI0 452 aa11.92□□□□□ -0.5
AMBRA1-211ENST00000533727 PQBP1O60828 265 aaKnown RBP11.92□□□□□ -0.5
AMBRA1-211ENST00000533727 EFCAB14O75071 495 aa11.92□□□□□ -0.5
AMBRA1-211ENST00000533727 NPEPPSP55786 919 aa11.92□□□□□ -0.5
AMBRA1-211ENST00000533727 LAMB3Q13751 1172 aa11.92□□□□□ -0.5
AMBRA1-211ENST00000533727 MRPS31Q92665 395 aaKnown RBP11.92□□□□□ -0.5
AMBRA1-211ENST00000533727 PRG3Q9Y2Y8 225 aaPredicted RBP11.92□□□□□ -0.5
AMBRA1-211ENST00000533727 ZNF142P52746 1687 aaPredicted RBP11.92□□□□□ -0.5
AMBRA1-211ENST00000533727 PPP1R12AO14974 1030 aaPredicted RBP11.92□□□□□ -0.5
AMBRA1-211ENST00000533727 GNRH1P01148 92 aa11.92□□□□□ -0.5
AMBRA1-211ENST00000533727 GTF2H1P32780 548 aa11.92□□□□□ -0.5
AMBRA1-211ENST00000533727 MTA1Q13330 715 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms