RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 TMEM39AQ9NV64 488 aa11.33□□□□□ -0.6
COLCA1-203ENST00000532918 RPSAP08865 295 aaKnown RBP11.32□□□□□ -0.6
COLCA1-203ENST00000532918 CDH6P55285 790 aa11.32□□□□□ -0.6
COLCA1-203ENST00000532918 ESRRGP62508 458 aa11.32□□□□□ -0.6
COLCA1-203ENST00000532918 GNGT1P63211 74 aa11.32□□□□□ -0.6
COLCA1-203ENST00000532918 EFHC1Q5JVL4 640 aa11.32□□□□□ -0.6
COLCA1-203ENST00000532918 GMCL1Q96IK5 515 aa11.32□□□□□ -0.6
COLCA1-203ENST00000532918 SRPK1Q96SB4 655 aaKnown RBP11.32□□□□□ -0.6
COLCA1-203ENST00000532918 MRPL46Q9H2W6 279 aaKnown RBP11.32□□□□□ -0.6
COLCA1-203ENST00000532918 CNOT10Q9H9A5 744 aaKnown RBP11.32□□□□□ -0.6
COLCA1-203ENST00000532918 FIS1Q9Y3D6 152 aa11.32□□□□□ -0.6
COLCA1-203ENST00000532918 ZNF609O15014 1411 aa11.32□□□□□ -0.6
COLCA1-203ENST00000532918 LRRC53A6NM62 1247 aa11.32□□□□□ -0.6
COLCA1-203ENST00000532918 GOLGA8MH3BSY2 632 aa11.32□□□□□ -0.6
COLCA1-203ENST00000532918 CABYRO75952 493 aa11.32□□□□□ -0.6
COLCA1-203ENST00000532918 FTLP02792 175 aaPredicted RBP11.32□□□□□ -0.6
COLCA1-203ENST00000532918 OAZ1P54368 228 aa11.32□□□□□ -0.6
COLCA1-203ENST00000532918 NBPF12Q5TAG4 269 aaPredicted RBP11.32□□□□□ -0.6
COLCA1-203ENST00000532918 ARMC6Q6NXE6 501 aa11.32□□□□□ -0.6
COLCA1-203ENST00000532918 ACRBPQ8NEB7 543 aa11.32□□□□□ -0.6
COLCA1-203ENST00000532918 FMO2Q99518 471 aa11.32□□□□□ -0.6
COLCA1-203ENST00000532918 BPIFA3Q9BQP9 254 aa11.32□□□□□ -0.6
COLCA1-203ENST00000532918 ZMYND12Q9H0C1 365 aa11.32□□□□□ -0.6
COLCA1-203ENST00000532918 STN1Q9H668 368 aaKnown RBP11.32□□□□□ -0.6
COLCA1-203ENST00000532918 YY1AP1Q9H869 796 aa11.32□□□□□ -0.6
COLCA1-203ENST00000532918 PRG3Q9Y2Y8 225 aaPredicted RBP11.32□□□□□ -0.6
COLCA1-203ENST00000532918 GNL1P36915 607 aaPredicted RBP11.32□□□□□ -0.6
COLCA1-203ENST00000532918 ACOT2P49753 483 aa11.32□□□□□ -0.6
COLCA1-203ENST00000532918 SNRNP35Q16560 246 aaKnown RBP11.32□□□□□ -0.6
COLCA1-203ENST00000532918 REM2Q8IYK8 340 aaPredicted RBP11.32□□□□□ -0.6
COLCA1-203ENST00000532918 LRRC71Q8N4P6 559 aa11.32□□□□□ -0.6
COLCA1-203ENST00000532918 ATPAF2Q8N5M1 289 aa11.32□□□□□ -0.6
COLCA1-203ENST00000532918 PPHLN1Q8NEY8 458 aaKnown RBP11.32□□□□□ -0.6
COLCA1-203ENST00000532918 CFAP61Q8NHU2 1237 aa11.32□□□□□ -0.6
COLCA1-203ENST00000532918 IGDCC4Q8TDY8 1250 aa11.32□□□□□ -0.6
COLCA1-203ENST00000532918 SARS2Q9NP81 518 aaKnown RBP11.32□□□□□ -0.6
COLCA1-203ENST00000532918 TRIM49BA6NDI0 452 aa11.32□□□□□ -0.6
COLCA1-203ENST00000532918 CFAP99D6REC4 459 aa11.32□□□□□ -0.6
COLCA1-203ENST00000532918 TRIM49P0CI25 452 aa11.32□□□□□ -0.6
COLCA1-203ENST00000532918 TRIM49CP0CI26 452 aa11.32□□□□□ -0.6
COLCA1-203ENST00000532918 PCYT1AP49585 367 aa11.32□□□□□ -0.6
COLCA1-203ENST00000532918 ATN1P54259 1190 aaPredicted RBP11.32□□□□□ -0.6
COLCA1-203ENST00000532918 DMTNQ08495 405 aa11.32□□□□□ -0.6
COLCA1-203ENST00000532918 DEFB115Q30KQ5 88 aa11.32□□□□□ -0.6
COLCA1-203ENST00000532918 CLEC10AQ8IUN9 316 aa11.32□□□□□ -0.6
COLCA1-203ENST00000532918 ATP6V0D2Q8N8Y2 350 aa11.32□□□□□ -0.6
COLCA1-203ENST00000532918 POLD4Q9HCU8 107 aa11.32□□□□□ -0.6
COLCA1-203ENST00000532918 RNASEH1O60930 286 aaKnown RBP11.31□□□□□ -0.6
COLCA1-203ENST00000532918 HSPA4LO95757 839 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 RPA1P27694 616 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 MAP4P27816 1152 aaKnown RBP11.31□□□□□ -0.6
COLCA1-203ENST00000532918 HERVK_113P62684 666 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 OCRLQ01968 901 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 GLE1Q53GS7 698 aaKnown RBP11.31□□□□□ -0.6
COLCA1-203ENST00000532918 IL31Q6EBC2 164 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 MOXD1Q6UVY6 613 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 C7orf25Q9BPX7 421 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 FHDC1Q9C0D6 1143 aaPredicted RBP11.31□□□□□ -0.6
COLCA1-203ENST00000532918 SPATC1LQ9H0A9 340 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 VTA1Q9NP79 307 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 OLFML3Q9NRN5 406 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 IRF1P10914 325 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 GFAPP14136 432 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 SLC11A2P49281 568 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 SESN3P58005 492 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 LLGL1Q15334 1064 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 TBCCQ15814 346 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 FKBP1CQ5VVH2 108 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 ITIH5Q86UX2 942 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 C17orf53Q8N3J3 647 aaPredicted RBP11.31□□□□□ -0.6
COLCA1-203ENST00000532918 OR6P1Q8NGX9 317 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 HTATIP2Q9BUP3 242 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 TEX12Q9BXU0 123 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 SAYSD1Q9NPB0 183 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 SCOCQ9UIL1 159 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 SOWAHDA6NJG2 315 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 C3orf70A6NLC5 250 aaPredicted RBP11.31□□□□□ -0.6
COLCA1-203ENST00000532918 P4HA2O15460 535 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 RTN2O75298 545 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 FAM200BP0CF97 657 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 VCAM1P19320 739 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 ADCY2Q08462 1091 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 PTPAQ15257 358 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 NBPF9Q3BBW0 867 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 PREPLQ4J6C6 727 aaPredicted RBP11.31□□□□□ -0.6
COLCA1-203ENST00000532918 ANKRD20A4Q4UJ75 823 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 ANKRD20A8PQ5CZ79 823 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 ANKRD20A2Q5SQ80 823 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 C6orf118Q5T5N4 469 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 ANKRD20A1Q5TYW2 823 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 CHADLQ6NUI6 762 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 ANGPTL8Q6UXH0 198 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 GLYCTKQ8IVS8 523 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 KRT35Q92764 455 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 USP13Q92995 863 aaPredicted RBP11.31□□□□□ -0.6
COLCA1-203ENST00000532918 GJB4Q9NTQ9 266 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 SCAF8Q9UPN6 1271 aaKnown RBP11.31□□□□□ -0.6
COLCA1-203ENST00000532918 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.31□□□□□ -0.6
COLCA1-203ENST00000532918 PITPNM2Q9BZ72 1349 aa11.31□□□□□ -0.6
COLCA1-203ENST00000532918 HIST1H2AGP0C0S8 130 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms