RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 CAMK1Q14012 370 aa26.98■■□□□ 1.91
USP48-214ENST00000532737 TJAP1Q5JTD0 557 aa26.98■■□□□ 1.91
USP48-214ENST00000532737 C12orf56Q8IXR9 622 aa26.98■■□□□ 1.91
USP48-214ENST00000532737 GPD1LQ8N335 351 aa26.98■■□□□ 1.91
USP48-214ENST00000532737 GOLGA5Q8TBA6 731 aa26.98■■□□□ 1.91
USP48-214ENST00000532737 NOC3LQ8WTT2 800 aaKnown RBP26.98■■□□□ 1.91
USP48-214ENST00000532737 POF1BQ8WVV4 589 aa26.98■■□□□ 1.91
USP48-214ENST00000532737 C18orf25Q96B23 403 aaPredicted RBP26.98■■□□□ 1.91
USP48-214ENST00000532737 IGSF21Q96ID5 467 aa26.98■■□□□ 1.91
USP48-214ENST00000532737 MARCH5Q9NX47 278 aa26.98■■□□□ 1.91
USP48-214ENST00000532737 KIAA1468Q9P260 1216 aa26.98■■□□□ 1.91
USP48-214ENST00000532737 CARNS1A5YM72 827 aa26.97■■□□□ 1.91
USP48-214ENST00000532737 POU3F3P20264 500 aaPredicted RBP26.97■■□□□ 1.91
USP48-214ENST00000532737 BMP6P22004 513 aa26.97■■□□□ 1.91
USP48-214ENST00000532737 MCM4P33991 863 aa26.97■■□□□ 1.91
USP48-214ENST00000532737 PRCPP42785 496 aa26.97■■□□□ 1.91
USP48-214ENST00000532737 WNT7BP56706 349 aa26.97■■□□□ 1.91
USP48-214ENST00000532737 MORC3Q14149 939 aa26.97■■□□□ 1.91
USP48-214ENST00000532737 ZBTB6Q15916 424 aa26.97■■□□□ 1.91
USP48-214ENST00000532737 CBWD2Q8IUF1 395 aa26.97■■□□□ 1.91
USP48-214ENST00000532737 GOLGA2P5Q9HBQ8 144 aa26.97■■□□□ 1.91
USP48-214ENST00000532737 SLC38A7Q9NVC3 462 aa26.97■■□□□ 1.91
USP48-214ENST00000532737 MTCH2Q9Y6C9 303 aa26.97■■□□□ 1.91
USP48-214ENST00000532737 COBLL1Q53SF7 1204 aa26.96■■□□□ 1.91
USP48-214ENST00000532737 JADE1Q6IE81 842 aa26.96■■□□□ 1.91
USP48-214ENST00000532737 BRSK2Q8IWQ3 736 aa26.96■■□□□ 1.91
USP48-214ENST00000532737 CD302Q8IX05 232 aa26.96■■□□□ 1.91
USP48-214ENST00000532737 TMEM130Q8N3G9 435 aa26.96■■□□□ 1.91
USP48-214ENST00000532737 XXYLT1Q8NBI6 393 aa26.96■■□□□ 1.91
USP48-214ENST00000532737 PPM1EQ8WY54 764 aa26.96■■□□□ 1.91
USP48-214ENST00000532737 KIF12Q96FN5 646 aa26.96■■□□□ 1.91
USP48-214ENST00000532737 TMEM169Q96HH4 297 aa26.96■■□□□ 1.91
USP48-214ENST00000532737 FBXL18Q96ME1 805 aa26.96■■□□□ 1.91
USP48-214ENST00000532737 COLEC11Q9BWP8 271 aa26.96■■□□□ 1.91
USP48-214ENST00000532737 GTPBP4Q9BZE4 634 aaKnown RBP26.96■■□□□ 1.91
USP48-214ENST00000532737 LMAN2LQ9H0V9 348 aa26.96■■□□□ 1.91
USP48-214ENST00000532737 NUP62CLQ9H1M0 184 aa26.96■■□□□ 1.91
USP48-214ENST00000532737 ASB7Q9H672 318 aa26.96■■□□□ 1.91
USP48-214ENST00000532737 RBAKQ9NYW8 714 aaPredicted RBP26.96■■□□□ 1.91
USP48-214ENST00000532737 TRAF3IP3Q9Y228 551 aa26.96■■□□□ 1.91
USP48-214ENST00000532737 COL4A4P53420 1690 aaPredicted RBP26.95■■□□□ 1.91
USP48-214ENST00000532737 TDRD15B5MCY1 1934 aaKnown RBP26.95■■□□□ 1.9
USP48-214ENST00000532737 KRT17Q04695 432 aa26.95■■□□□ 1.9
USP48-214ENST00000532737 UBE3AQ05086 875 aa26.95■■□□□ 1.9
USP48-214ENST00000532737 ADSSL1Q8N142 457 aa26.95■■□□□ 1.9
USP48-214ENST00000532737 MRPL38Q96DV4 380 aaKnown RBP26.95■■□□□ 1.9
USP48-214ENST00000532737 VN1R3Q9BXE9 311 aa26.95■■□□□ 1.9
USP48-214ENST00000532737 KIAA1586Q9HCI6 787 aa26.95■■□□□ 1.9
USP48-214ENST00000532737 DMAC2Q9NW81 257 aa26.95■■□□□ 1.9
USP48-214ENST00000532737 LMCD1Q9NZU5 365 aa26.95■■□□□ 1.9
USP48-214ENST00000532737 TUBGCP4Q9UGJ1 667 aa26.95■■□□□ 1.9
USP48-214ENST00000532737 LZTS1Q9Y250 596 aa26.95■■□□□ 1.9
USP48-214ENST00000532737 TRIP11Q15643 1979 aa26.95■■□□□ 1.9
USP48-214ENST00000532737 CITO14578 2027 aa26.94■■□□□ 1.9
USP48-214ENST00000532737 ZNF233A6NK53 670 aa26.94■■□□□ 1.9
USP48-214ENST00000532737 CSPG5O95196 566 aa26.94■■□□□ 1.9
USP48-214ENST00000532737 NFICP08651 508 aa26.94■■□□□ 1.9
USP48-214ENST00000532737 IGFBP6P24592 240 aaPredicted RBP26.94■■□□□ 1.9
USP48-214ENST00000532737 HSP90AA2PQ14568 343 aaPredicted RBP26.94■■□□□ 1.9
USP48-214ENST00000532737 SLC9A9Q8IVB4 645 aa26.94■■□□□ 1.9
USP48-214ENST00000532737 RDH13Q8NBN7 331 aa26.94■■□□□ 1.9
USP48-214ENST00000532737 TSPAN18Q96SJ8 248 aa26.94■■□□□ 1.9
USP48-214ENST00000532737 PUF60Q9UHX1 559 aaKnown RBP26.94■■□□□ 1.9
USP48-214ENST00000532737 PRRC2BQ5JSZ5 2229 aaKnown RBP26.93■■□□□ 1.9
USP48-214ENST00000532737 CALUO43852 315 aaPredicted RBP26.93■■□□□ 1.9
USP48-214ENST00000532737 IL18RAPO95256 599 aa26.93■■□□□ 1.9
USP48-214ENST00000532737 NR3C1P04150 777 aa26.93■■□□□ 1.9
USP48-214ENST00000532737 CD44P16070 742 aaKnown RBP26.93■■□□□ 1.9
USP48-214ENST00000532737 IRS1P35568 1242 aa26.93■■□□□ 1.9
USP48-214ENST00000532737 CLCNKBP51801 687 aa26.93■■□□□ 1.9
USP48-214ENST00000532737 GUCY2FP51841 1108 aa26.93■■□□□ 1.9
USP48-214ENST00000532737 ERVFC1P60507 584 aa26.93■■□□□ 1.9
USP48-214ENST00000532737 PTPROQ16827 1216 aa26.93■■□□□ 1.9
USP48-214ENST00000532737 ZCWPW2Q504Y3 356 aa26.93■■□□□ 1.9
USP48-214ENST00000532737 DDX53Q86TM3 631 aaKnown RBP26.93■■□□□ 1.9
USP48-214ENST00000532737 TMEM174Q8WUU8 243 aa26.93■■□□□ 1.9
USP48-214ENST00000532737 PDE11AQ9HCR9 933 aa26.93■■□□□ 1.9
USP48-214ENST00000532737 UBQLN1Q9UMX0 589 aaKnown RBP26.93■■□□□ 1.9
USP48-214ENST00000532737 DERAQ9Y315 318 aa26.93■■□□□ 1.9
USP48-214ENST00000532737 TULP1O00294 542 aaPredicted RBP26.92■■□□□ 1.9
USP48-214ENST00000532737 EXOC3O60645 756 aa26.92■■□□□ 1.9
USP48-214ENST00000532737 KIF4AO95239 1232 aa26.92■■□□□ 1.9
USP48-214ENST00000532737 SNRNP35Q16560 246 aaKnown RBP26.92■■□□□ 1.9
USP48-214ENST00000532737 UPP1Q16831 310 aa26.92■■□□□ 1.9
USP48-214ENST00000532737 CD300LGQ6UXG3 332 aa26.92■■□□□ 1.9
USP48-214ENST00000532737 EFCAB13Q8IY85 973 aa26.92■■□□□ 1.9
USP48-214ENST00000532737 ATXN2LQ8WWM7 1075 aaKnown RBP26.92■■□□□ 1.9
USP48-214ENST00000532737 UROC1Q96N76 676 aa26.92■■□□□ 1.9
USP48-214ENST00000532737 THEGQ9P2T0 379 aa26.92■■□□□ 1.9
USP48-214ENST00000532737 PCDHGC5Q9Y5F6 944 aa26.92■■□□□ 1.9
USP48-214ENST00000532737 PPP1R3GB7ZBB8 358 aa26.91■■□□□ 1.9
USP48-214ENST00000532737 TADA2AO75478 443 aa26.91■■□□□ 1.9
USP48-214ENST00000532737 EFEMP2O95967 443 aa26.91■■□□□ 1.9
USP48-214ENST00000532737 MBD3O95983 291 aa26.91■■□□□ 1.9
USP48-214ENST00000532737 CYP3A5P20815 502 aa26.91■■□□□ 1.9
USP48-214ENST00000532737 MYBPC2Q14324 1141 aa26.91■■□□□ 1.9
USP48-214ENST00000532737 TMEM132DQ14C87 1099 aa26.91■■□□□ 1.9
USP48-214ENST00000532737 CCDC85BQ15834 202 aaPredicted RBP26.91■■□□□ 1.9
USP48-214ENST00000532737 SPATA1Q5VX52 437 aa26.91■■□□□ 1.9
USP48-214ENST00000532737 CENPPQ6IPU0 288 aa26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms