RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.08■■□□□ 1.61
CAPN1-222ENST00000532285 ZDHHC9Q9Y397 364 aa25.08■■□□□ 1.61
CAPN1-222ENST00000532285 VWA8A3KMH1 1905 aa25.08■■□□□ 1.6
CAPN1-222ENST00000532285 FRMD3A2A2Y4 597 aa25.07■■□□□ 1.6
CAPN1-222ENST00000532285 C19orf67A6NJJ6 358 aa25.07■■□□□ 1.6
CAPN1-222ENST00000532285 OGTO15294 1046 aa25.07■■□□□ 1.6
CAPN1-222ENST00000532285 CLCNKBP51801 687 aa25.07■■□□□ 1.6
CAPN1-222ENST00000532285 AMPD3Q01432 767 aa25.07■■□□□ 1.6
CAPN1-222ENST00000532285 CREMQ03060 361 aa25.07■■□□□ 1.6
CAPN1-222ENST00000532285 ITIH3Q06033 890 aa25.07■■□□□ 1.6
CAPN1-222ENST00000532285 UPP1Q16831 310 aa25.07■■□□□ 1.6
CAPN1-222ENST00000532285 HERC4Q5GLZ8 1057 aaPredicted RBP25.07■■□□□ 1.6
CAPN1-222ENST00000532285 RIN2Q8WYP3 895 aaPredicted RBP25.07■■□□□ 1.6
CAPN1-222ENST00000532285 DHX58Q96C10 678 aa25.07■■□□□ 1.6
CAPN1-222ENST00000532285 APOL5Q9BWW9 433 aa25.07■■□□□ 1.6
CAPN1-222ENST00000532285 STRA6Q9BX79 667 aa25.07■■□□□ 1.6
CAPN1-222ENST00000532285 GOLGA2P5Q9HBQ8 144 aa25.07■■□□□ 1.6
CAPN1-222ENST00000532285 OLFML3Q9NRN5 406 aa25.07■■□□□ 1.6
CAPN1-222ENST00000532285 PANK4Q9NVE7 773 aa25.07■■□□□ 1.6
CAPN1-222ENST00000532285 KBTBD4Q9NVX7 518 aa25.07■■□□□ 1.6
CAPN1-222ENST00000532285 FAM13BQ9NYF5 915 aa25.07■■□□□ 1.6
CAPN1-222ENST00000532285 FNIP2Q9P278 1114 aa25.07■■□□□ 1.6
CAPN1-222ENST00000532285 A0A0B4J269 797 aa25.06■■□□□ 1.6
CAPN1-222ENST00000532285 TEX28O15482 410 aa25.06■■□□□ 1.6
CAPN1-222ENST00000532285 MEFVO15553 781 aaPredicted RBP25.06■■□□□ 1.6
CAPN1-222ENST00000532285 PPP1R37O75864 691 aa25.06■■□□□ 1.6
CAPN1-222ENST00000532285 B3GAT3O94766 335 aa25.06■■□□□ 1.6
CAPN1-222ENST00000532285 SOX4Q06945 474 aaPredicted RBP25.06■■□□□ 1.6
CAPN1-222ENST00000532285 FAM171A1Q5VUB5 890 aa25.06■■□□□ 1.6
CAPN1-222ENST00000532285 RESP18Q5W5W9 173 aa25.06■■□□□ 1.6
CAPN1-222ENST00000532285 CES5AQ6NT32 575 aa25.06■■□□□ 1.6
CAPN1-222ENST00000532285 SLC39A4Q6P5W5 647 aa25.06■■□□□ 1.6
CAPN1-222ENST00000532285 TTPALQ9BTX7 342 aa25.06■■□□□ 1.6
CAPN1-222ENST00000532285 MSTO1Q9BUK6 570 aa25.06■■□□□ 1.6
CAPN1-222ENST00000532285 ADAM7Q9H2U9 754 aa25.06■■□□□ 1.6
CAPN1-222ENST00000532285 PCDHB13Q9Y5F0 798 aa25.06■■□□□ 1.6
CAPN1-222ENST00000532285 ATP6V1DQ9Y5K8 247 aa25.06■■□□□ 1.6
CAPN1-222ENST00000532285 POLR2DO15514 142 aaKnown RBP25.05■■□□□ 1.6
CAPN1-222ENST00000532285 C1RP00736 705 aa25.05■■□□□ 1.6
CAPN1-222ENST00000532285 CXCL8P10145 99 aa25.05■■□□□ 1.6
CAPN1-222ENST00000532285 RPL9P32969 192 aaKnown RBP25.05■■□□□ 1.6
CAPN1-222ENST00000532285 CBX2Q14781 532 aaPredicted RBP25.05■■□□□ 1.6
CAPN1-222ENST00000532285 SLFN12LQ6IEE8 588 aa25.05■■□□□ 1.6
CAPN1-222ENST00000532285 CCDC65Q8IXS2 484 aa25.05■■□□□ 1.6
CAPN1-222ENST00000532285 STAMQ92783 540 aa25.05■■□□□ 1.6
CAPN1-222ENST00000532285 FBXL18Q96ME1 805 aa25.05■■□□□ 1.6
CAPN1-222ENST00000532285 PHF7Q9BWX1 381 aaPredicted RBP25.05■■□□□ 1.6
CAPN1-222ENST00000532285 MAGEF1Q9HAY2 307 aa25.05■■□□□ 1.6
CAPN1-222ENST00000532285 TBC1D7Q9P0N9 293 aa25.05■■□□□ 1.6
CAPN1-222ENST00000532285 DPP7Q9UHL4 492 aa25.05■■□□□ 1.6
CAPN1-222ENST00000532285 ANK1P16157 1881 aa25.04■■□□□ 1.6
CAPN1-222ENST00000532285 TTC26A0AVF1 554 aa25.04■■□□□ 1.6
CAPN1-222ENST00000532285 ANKRD63C9JTQ0 380 aa25.04■■□□□ 1.6
CAPN1-222ENST00000532285 TRAPPC3O43617 180 aa25.04■■□□□ 1.6
CAPN1-222ENST00000532285 FAM189A1O60320 539 aa25.04■■□□□ 1.6
CAPN1-222ENST00000532285 KRT85P78386 507 aa25.04■■□□□ 1.6
CAPN1-222ENST00000532285 ALCAMQ13740 583 aa25.04■■□□□ 1.6
CAPN1-222ENST00000532285 RTP2Q5QGT7 225 aa25.04■■□□□ 1.6
CAPN1-222ENST00000532285 PDXDC1Q6P996 788 aa25.04■■□□□ 1.6
CAPN1-222ENST00000532285 CEP57Q86XR8 500 aa25.04■■□□□ 1.6
CAPN1-222ENST00000532285 C18orf25Q96B23 403 aaPredicted RBP25.04■■□□□ 1.6
CAPN1-222ENST00000532285 ACCSQ96QU6 501 aa25.04■■□□□ 1.6
CAPN1-222ENST00000532285 PYM1Q9BRP8 204 aaKnown RBP25.04■■□□□ 1.6
CAPN1-222ENST00000532285 RPF1Q9H9Y2 349 aaKnown RBP25.04■■□□□ 1.6
CAPN1-222ENST00000532285 EXOC7Q9UPT5 735 aa25.04■■□□□ 1.6
CAPN1-222ENST00000532285 GTF3C5Q9Y5Q8 519 aaPredicted RBP25.04■■□□□ 1.6
CAPN1-222ENST00000532285 STYXL1Q9Y6J8 313 aa25.04■■□□□ 1.6
CAPN1-222ENST00000532285 GCNT3O95395 438 aa25.03■■□□□ 1.6
CAPN1-222ENST00000532285 GLUD1P00367 558 aa25.03■■□□□ 1.6
CAPN1-222ENST00000532285 TNFSF9P41273 254 aa25.03■■□□□ 1.6
CAPN1-222ENST00000532285 PPP2R3AQ06190 1150 aa25.03■■□□□ 1.6
CAPN1-222ENST00000532285 RARS2Q5T160 578 aaKnown RBP25.03■■□□□ 1.6
CAPN1-222ENST00000532285 L1TD1Q5T7N2 865 aaKnown RBP25.03■■□□□ 1.6
CAPN1-222ENST00000532285 CNNM4Q6P4Q7 775 aa25.03■■□□□ 1.6
CAPN1-222ENST00000532285 ELMSAN1Q6PJG2 1045 aa25.03■■□□□ 1.6
CAPN1-222ENST00000532285 CD300LGQ6UXG3 332 aa25.03■■□□□ 1.6
CAPN1-222ENST00000532285 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.03■■□□□ 1.6
CAPN1-222ENST00000532285 C12orf76Q8N812 135 aaPredicted RBP25.03■■□□□ 1.6
CAPN1-222ENST00000532285 PIK3R5Q8WYR1 880 aa25.03■■□□□ 1.6
CAPN1-222ENST00000532285 SPATA32Q96LK8 384 aa25.03■■□□□ 1.6
CAPN1-222ENST00000532285 TSPAN18Q96SJ8 248 aa25.03■■□□□ 1.6
CAPN1-222ENST00000532285 TRIM9Q9C026 710 aa25.03■■□□□ 1.6
CAPN1-222ENST00000532285 SPDYE4A6NLX3 237 aa25.02■■□□□ 1.6
CAPN1-222ENST00000532285 PODXLO00592 558 aa25.02■■□□□ 1.6
CAPN1-222ENST00000532285 MTHFRP42898 656 aa25.02■■□□□ 1.6
CAPN1-222ENST00000532285 POSTNQ15063 836 aa25.02■■□□□ 1.6
CAPN1-222ENST00000532285 ENOX2Q16206 610 aaKnown RBP25.02■■□□□ 1.6
CAPN1-222ENST00000532285 ADALQ6DHV7 355 aa25.02■■□□□ 1.6
CAPN1-222ENST00000532285 PRSS55Q6UWB4 352 aaPredicted RBP25.02■■□□□ 1.6
CAPN1-222ENST00000532285 C3orf58Q8NDZ4 430 aa25.02■■□□□ 1.6
CAPN1-222ENST00000532285 LEO1Q8WVC0 666 aaPredicted RBP25.02■■□□□ 1.6
CAPN1-222ENST00000532285 RIPOR3Q96MK2 946 aa25.02■■□□□ 1.6
CAPN1-222ENST00000532285 NECTIN4Q96NY8 510 aa25.02■■□□□ 1.6
CAPN1-222ENST00000532285 SFXN1Q9H9B4 322 aa25.02■■□□□ 1.6
CAPN1-222ENST00000532285 CPSF3Q9UKF6 684 aaKnown RBP25.02■■□□□ 1.6
CAPN1-222ENST00000532285 C2orf16Q68DN1 1984 aa25.02■■□□□ 1.6
CAPN1-222ENST00000532285 LACTBL1A8MY62 500 aa25.01■■□□□ 1.59
CAPN1-222ENST00000532285 ADRB2P07550 413 aa25.01■■□□□ 1.59
CAPN1-222ENST00000532285 FGFR3P22607 806 aa25.01■■□□□ 1.59
CAPN1-222ENST00000532285 IGFBP6P24592 240 aaPredicted RBP25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms