RNA–Protein interactions for RNA: ENST00000531885.5

CMTM1-215, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-215ENST00000531885 IER2Q9BTL4 223 aa12.74□□□□□ -0.37
CMTM1-215ENST00000531885 PDZD7Q9H5P4 517 aa12.74□□□□□ -0.37
CMTM1-215ENST00000531885 BRD9Q9H8M2 597 aa12.74□□□□□ -0.37
CMTM1-215ENST00000531885 ORC3Q9UBD5 711 aaPredicted RBP12.74□□□□□ -0.37
CMTM1-215ENST00000531885 MTRRQ9UBK8 725 aa12.74□□□□□ -0.37
CMTM1-215ENST00000531885 CDY1Q9Y6F8 540 aa12.74□□□□□ -0.37
CMTM1-215ENST00000531885 TPRP12270 2363 aaKnown RBP12.74□□□□□ -0.37
CMTM1-215ENST00000531885 PATJQ8NI35 1801 aa12.74□□□□□ -0.37
CMTM1-215ENST00000531885 GPR179Q6PRD1 2367 aa12.73□□□□□ -0.37
CMTM1-215ENST00000531885 ARHGEF35A5YM69 484 aa12.73□□□□□ -0.37
CMTM1-215ENST00000531885 TMEM189-UBE2V1I3L0A0 370 aa12.73□□□□□ -0.37
CMTM1-215ENST00000531885 PRRG1O14668 218 aa12.73□□□□□ -0.37
CMTM1-215ENST00000531885 PTGESO14684 152 aa12.73□□□□□ -0.37
CMTM1-215ENST00000531885 ZNF197O14709 1029 aa12.73□□□□□ -0.37
CMTM1-215ENST00000531885 RHOP08100 348 aa12.73□□□□□ -0.37
CMTM1-215ENST00000531885 PTPN2P17706 415 aa12.73□□□□□ -0.37
CMTM1-215ENST00000531885 YARSP54577 528 aaKnown RBP12.73□□□□□ -0.37
CMTM1-215ENST00000531885 ANKRD1Q15327 319 aa12.73□□□□□ -0.37
CMTM1-215ENST00000531885 NOSTRINQ8IVI9 506 aa12.73□□□□□ -0.37
CMTM1-215ENST00000531885 CLDN23Q96B33 292 aa12.73□□□□□ -0.37
CMTM1-215ENST00000531885 ELSPBP1Q96BH3 223 aa12.73□□□□□ -0.37
CMTM1-215ENST00000531885 MCRS1Q96EZ8 462 aa12.73□□□□□ -0.37
CMTM1-215ENST00000531885 NACC1Q96RE7 527 aa12.73□□□□□ -0.37
CMTM1-215ENST00000531885 RTKNQ9BST9 563 aa12.73□□□□□ -0.37
CMTM1-215ENST00000531885 FZD8Q9H461 694 aa12.73□□□□□ -0.37
CMTM1-215ENST00000531885 TUFT1Q9NNX1 390 aa12.73□□□□□ -0.37
CMTM1-215ENST00000531885 GPRC5CQ9NQ84 441 aa12.73□□□□□ -0.37
CMTM1-215ENST00000531885 HCFC1R1Q9NWW0 138 aa12.73□□□□□ -0.37
CMTM1-215ENST00000531885 DNMT3BQ9UBC3 853 aaKnown RBP12.73□□□□□ -0.37
CMTM1-215ENST00000531885 GDAQ9Y2T3 454 aa12.73□□□□□ -0.37
CMTM1-215ENST00000531885 MTF2Q9Y483 593 aaPredicted RBP12.73□□□□□ -0.37
CMTM1-215ENST00000531885 BACE2Q9Y5Z0 518 aa12.73□□□□□ -0.37
CMTM1-215ENST00000531885 EPG5Q9HCE0 2579 aa12.72□□□□□ -0.37
CMTM1-215ENST00000531885 ACKR2O00590 384 aa12.72□□□□□ -0.37
CMTM1-215ENST00000531885 ADAM12O43184 909 aa12.72□□□□□ -0.37
CMTM1-215ENST00000531885 FGFR3P22607 806 aa12.72□□□□□ -0.37
CMTM1-215ENST00000531885 TARSP26639 723 aaKnown RBP12.72□□□□□ -0.37
CMTM1-215ENST00000531885 NAMPTP43490 491 aa12.72□□□□□ -0.37
CMTM1-215ENST00000531885 EFNA5P52803 228 aa12.72□□□□□ -0.37
CMTM1-215ENST00000531885 ATXN1P54253 815 aaKnown RBP12.72□□□□□ -0.37
CMTM1-215ENST00000531885 NR5A1Q13285 461 aa12.72□□□□□ -0.37
CMTM1-215ENST00000531885 CYP4A22Q5TCH4 519 aa12.72□□□□□ -0.37
CMTM1-215ENST00000531885 IQCEQ6IPM2 695 aa12.72□□□□□ -0.37
CMTM1-215ENST00000531885 PDZD4Q76G19 769 aaPredicted RBP12.72□□□□□ -0.37
CMTM1-215ENST00000531885 IRF7Q92985 503 aa12.72□□□□□ -0.37
CMTM1-215ENST00000531885 CNTNAP3BQ96NU0 1288 aa12.72□□□□□ -0.37
CMTM1-215ENST00000531885 CNTNAP3Q9BZ76 1288 aa12.72□□□□□ -0.37
CMTM1-215ENST00000531885 ZFP14Q9HCL3 533 aa12.72□□□□□ -0.37
CMTM1-215ENST00000531885 AVENQ9NQS1 362 aaPredicted RBP12.72□□□□□ -0.37
CMTM1-215ENST00000531885 HEBP1Q9NRV9 189 aa12.72□□□□□ -0.37
CMTM1-215ENST00000531885 TOPORSQ9NS56 1045 aaPredicted RBP12.72□□□□□ -0.37
CMTM1-215ENST00000531885 NDRG2Q9UN36 371 aaKnown RBP12.72□□□□□ -0.37
CMTM1-215ENST00000531885 SPTBN2O15020 2390 aa12.71□□□□□ -0.37
CMTM1-215ENST00000531885 H7C4K7 107 aa12.71□□□□□ -0.37
CMTM1-215ENST00000531885 PFKFB2O60825 505 aa12.71□□□□□ -0.37
CMTM1-215ENST00000531885 CCR3P51677 355 aa12.71□□□□□ -0.37
CMTM1-215ENST00000531885 CLCNKBP51801 687 aa12.71□□□□□ -0.37
CMTM1-215ENST00000531885 DDX27Q96GQ7 796 aaKnown RBP12.71□□□□□ -0.37
CMTM1-215ENST00000531885 CORO1BQ9BR76 489 aa12.71□□□□□ -0.37
CMTM1-215ENST00000531885 TRMT61BQ9BVS5 477 aaKnown RBP12.71□□□□□ -0.37
CMTM1-215ENST00000531885 CCDC94Q9BW85 323 aaPredicted RBP12.71□□□□□ -0.37
CMTM1-215ENST00000531885 PRMT8Q9NR22 394 aaPredicted RBP12.71□□□□□ -0.37
CMTM1-215ENST00000531885 GJB4Q9NTQ9 266 aa12.71□□□□□ -0.37
CMTM1-215ENST00000531885 SLC38A7Q9NVC3 462 aa12.71□□□□□ -0.37
CMTM1-215ENST00000531885 ACACBO00763 2458 aa12.7□□□□□ -0.38
CMTM1-215ENST00000531885 PHLPP2Q6ZVD8 1323 aa12.7□□□□□ -0.38
CMTM1-215ENST00000531885 LILRB5O75023 590 aa12.7□□□□□ -0.38
CMTM1-215ENST00000531885 TKTP29401 623 aaKnown RBP12.7□□□□□ -0.38
CMTM1-215ENST00000531885 ARPP19P56211 112 aa12.7□□□□□ -0.38
CMTM1-215ENST00000531885 MTAPQ13126 283 aa12.7□□□□□ -0.38
CMTM1-215ENST00000531885 SAFBQ15424 915 aaKnown RBP eCLIP12.7□□□□□ -0.38
CMTM1-215ENST00000531885 NAB2Q15742 525 aa12.7□□□□□ -0.38
CMTM1-215ENST00000531885 EARS2Q5JPH6 523 aaKnown RBP12.7□□□□□ -0.38
CMTM1-215ENST00000531885 GLRA4Q5JXX5 417 aa12.7□□□□□ -0.38
CMTM1-215ENST00000531885 ATF7IP2Q5U623 682 aa12.7□□□□□ -0.38
CMTM1-215ENST00000531885 HAUS3Q68CZ6 603 aa12.7□□□□□ -0.38
CMTM1-215ENST00000531885 LAIR1Q6GTX8 287 aa12.7□□□□□ -0.38
CMTM1-215ENST00000531885 C1orf228Q6PIY5 440 aa12.7□□□□□ -0.38
CMTM1-215ENST00000531885 TSSK4Q6SA08 328 aa12.7□□□□□ -0.38
CMTM1-215ENST00000531885 PADI6Q6TGC4 694 aa12.7□□□□□ -0.38
CMTM1-215ENST00000531885 PRR23BQ6ZRT6 265 aa12.7□□□□□ -0.38
CMTM1-215ENST00000531885 CELF5Q8N6W0 485 aaKnown RBP12.7□□□□□ -0.38
CMTM1-215ENST00000531885 ZNF461Q8TAF7 563 aa12.7□□□□□ -0.38
CMTM1-215ENST00000531885 CYP4F11Q9HBI6 524 aa12.7□□□□□ -0.38
CMTM1-215ENST00000531885 NUB1Q9Y5A7 615 aa12.7□□□□□ -0.38
CMTM1-215ENST00000531885 VWA8A3KMH1 1905 aa12.7□□□□□ -0.38
CMTM1-215ENST00000531885 A0A087WWV3 80 aa12.69□□□□□ -0.38
CMTM1-215ENST00000531885 ARHGEF37A1IGU5 675 aa12.69□□□□□ -0.38
CMTM1-215ENST00000531885 FAM205CA6NFA0 338 aa12.69□□□□□ -0.38
CMTM1-215ENST00000531885 SYN3O14994 580 aa12.69□□□□□ -0.38
CMTM1-215ENST00000531885 FOXD2O60548 495 aaPredicted RBP12.69□□□□□ -0.38
CMTM1-215ENST00000531885 LRP3O75074 770 aa12.69□□□□□ -0.38
CMTM1-215ENST00000531885 MICAL2O94851 1124 aa12.69□□□□□ -0.38
CMTM1-215ENST00000531885 CEBPBP17676 345 aa12.69□□□□□ -0.38
CMTM1-215ENST00000531885 PSMC3P17980 439 aa12.69□□□□□ -0.38
CMTM1-215ENST00000531885 ROR1Q01973 937 aa12.69□□□□□ -0.38
CMTM1-215ENST00000531885 UPP1Q16831 310 aa12.69□□□□□ -0.38
CMTM1-215ENST00000531885 TANGO2Q6ICL3 276 aa12.69□□□□□ -0.38
CMTM1-215ENST00000531885 SLC8B1Q6J4K2 584 aa12.69□□□□□ -0.38
CMTM1-215ENST00000531885 CATSPER3Q86XQ3 398 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms