RNA–Protein interactions for RNA: ENST00000531056.5

UBXN1-211, Transcript of UBX domain protein 1, humanhuman

TSL 4

Gene UBXN1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-211ENST00000531056 C3orf58Q8NDZ4 430 aa20.73■□□□□ 0.91
UBXN1-211ENST00000531056 KHSRPQ92945 711 aaKnown RBP eCLIP20.73■□□□□ 0.91
UBXN1-211ENST00000531056 APOL5Q9BWW9 433 aa20.73■□□□□ 0.91
UBXN1-211ENST00000531056 OLFML3Q9NRN5 406 aa20.73■□□□□ 0.91
UBXN1-211ENST00000531056 SLC38A7Q9NVC3 462 aa20.73■□□□□ 0.91
UBXN1-211ENST00000531056 KBTBD4Q9NVX7 518 aa20.73■□□□□ 0.91
UBXN1-211ENST00000531056 A0A0B4J269 797 aa20.72■□□□□ 0.91
UBXN1-211ENST00000531056 ANKRD63C9JTQ0 380 aa20.72■□□□□ 0.91
UBXN1-211ENST00000531056 OGTO15294 1046 aa20.72■□□□□ 0.91
UBXN1-211ENST00000531056 CLTAP09496 248 aa20.72■□□□□ 0.91
UBXN1-211ENST00000531056 SSTR3P32745 418 aaPredicted RBP20.72■□□□□ 0.91
UBXN1-211ENST00000531056 TNFSF9P41273 254 aa20.72■□□□□ 0.91
UBXN1-211ENST00000531056 ME1P48163 572 aa20.72■□□□□ 0.91
UBXN1-211ENST00000531056 ZBTB41Q5SVQ8 909 aa20.72■□□□□ 0.91
UBXN1-211ENST00000531056 RESP18Q5W5W9 173 aa20.72■□□□□ 0.91
UBXN1-211ENST00000531056 DCLRE1AQ6PJP8 1040 aa20.72■□□□□ 0.91
UBXN1-211ENST00000531056 RIN2Q8WYP3 895 aaPredicted RBP20.72■□□□□ 0.91
UBXN1-211ENST00000531056 DHX58Q96C10 678 aa20.72■□□□□ 0.91
UBXN1-211ENST00000531056 FBXL18Q96ME1 805 aa20.72■□□□□ 0.91
UBXN1-211ENST00000531056 POP1Q99575 1024 aaKnown RBP20.72■□□□□ 0.91
UBXN1-211ENST00000531056 MRPL44Q9H9J2 332 aaKnown RBP20.72■□□□□ 0.91
UBXN1-211ENST00000531056 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.72■□□□□ 0.91
UBXN1-211ENST00000531056 FNIP2Q9P278 1114 aa20.72■□□□□ 0.91
UBXN1-211ENST00000531056 CDH22Q9UJ99 828 aa20.72■□□□□ 0.91
UBXN1-211ENST00000531056 ANK1P16157 1881 aa20.72■□□□□ 0.91
UBXN1-211ENST00000531056 DENND4AQ7Z401 1863 aa20.72■□□□□ 0.91
UBXN1-211ENST00000531056 TTC26A0AVF1 554 aa20.71■□□□□ 0.91
UBXN1-211ENST00000531056 TISP43B9A030 160 aa20.71■□□□□ 0.91
UBXN1-211ENST00000531056 ADH1AP07327 375 aa20.71■□□□□ 0.91
UBXN1-211ENST00000531056 IDEP14735 1019 aa20.71■□□□□ 0.91
UBXN1-211ENST00000531056 ITIH3Q06033 890 aa20.71■□□□□ 0.91
UBXN1-211ENST00000531056 ELAVL2Q12926 359 aaKnown RBP20.71■□□□□ 0.91
UBXN1-211ENST00000531056 CBX2Q14781 532 aaPredicted RBP20.71■□□□□ 0.91
UBXN1-211ENST00000531056 KYAT1Q16773 422 aa20.71■□□□□ 0.91
UBXN1-211ENST00000531056 FAM171A1Q5VUB5 890 aa20.71■□□□□ 0.91
UBXN1-211ENST00000531056 STAMQ92783 540 aa20.71■□□□□ 0.91
UBXN1-211ENST00000531056 C18orf25Q96B23 403 aaPredicted RBP20.71■□□□□ 0.91
UBXN1-211ENST00000531056 CHAMP1Q96JM3 812 aa20.71■□□□□ 0.91
UBXN1-211ENST00000531056 TTPALQ9BTX7 342 aa20.71■□□□□ 0.91
UBXN1-211ENST00000531056 PHF7Q9BWX1 381 aaPredicted RBP20.71■□□□□ 0.91
UBXN1-211ENST00000531056 FGFBP2Q9BYJ0 223 aa20.71■□□□□ 0.91
UBXN1-211ENST00000531056 IKZF4Q9H2S9 585 aa20.71■□□□□ 0.91
UBXN1-211ENST00000531056 ADAM7Q9H2U9 754 aa20.71■□□□□ 0.91
UBXN1-211ENST00000531056 PLEKHA5Q9HAU0 1116 aa20.71■□□□□ 0.91
UBXN1-211ENST00000531056 PANK4Q9NVE7 773 aa20.71■□□□□ 0.91
UBXN1-211ENST00000531056 TBC1D7Q9P0N9 293 aa20.71■□□□□ 0.91
UBXN1-211ENST00000531056 STYXL1Q9Y6J8 313 aa20.71■□□□□ 0.91
UBXN1-211ENST00000531056 MTCL1Q9Y4B5 1905 aaKnown RBP20.7■□□□□ 0.91
UBXN1-211ENST00000531056 PODXLO00592 558 aa20.7■□□□□ 0.9
UBXN1-211ENST00000531056 B3GAT3O94766 335 aa20.7■□□□□ 0.9
UBXN1-211ENST00000531056 ADRB2P07550 413 aa20.7■□□□□ 0.9
UBXN1-211ENST00000531056 CASP5P51878 434 aa20.7■□□□□ 0.9
UBXN1-211ENST00000531056 CREMQ03060 361 aa20.7■□□□□ 0.9
UBXN1-211ENST00000531056 KCNA1Q09470 495 aa20.7■□□□□ 0.9
UBXN1-211ENST00000531056 ENOX2Q16206 610 aaKnown RBP20.7■□□□□ 0.9
UBXN1-211ENST00000531056 HERC4Q5GLZ8 1057 aaPredicted RBP20.7■□□□□ 0.9
UBXN1-211ENST00000531056 RARS2Q5T160 578 aaKnown RBP20.7■□□□□ 0.9
UBXN1-211ENST00000531056 L1TD1Q5T7N2 865 aaKnown RBP20.7■□□□□ 0.9
UBXN1-211ENST00000531056 CNNM4Q6P4Q7 775 aa20.7■□□□□ 0.9
UBXN1-211ENST00000531056 PRSS55Q6UWB4 352 aaPredicted RBP20.7■□□□□ 0.9
UBXN1-211ENST00000531056 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.7■□□□□ 0.9
UBXN1-211ENST00000531056 C12orf76Q8N812 135 aaPredicted RBP20.7■□□□□ 0.9
UBXN1-211ENST00000531056 IQUBQ8NA54 791 aa20.7■□□□□ 0.9
UBXN1-211ENST00000531056 PIK3R5Q8WYR1 880 aa20.7■□□□□ 0.9
UBXN1-211ENST00000531056 DDX27Q96GQ7 796 aaKnown RBP20.7■□□□□ 0.9
UBXN1-211ENST00000531056 MSTO1Q9BUK6 570 aa20.7■□□□□ 0.9
UBXN1-211ENST00000531056 TRIM9Q9C026 710 aa20.7■□□□□ 0.9
UBXN1-211ENST00000531056 SFXN1Q9H9B4 322 aa20.7■□□□□ 0.9
UBXN1-211ENST00000531056 C2orf16Q68DN1 1984 aa20.7■□□□□ 0.9
UBXN1-211ENST00000531056 TCHHQ07283 1943 aa20.69■□□□□ 0.9
UBXN1-211ENST00000531056 LOC730098B7Z3J9 87 aa20.69■□□□□ 0.9
UBXN1-211ENST00000531056 GCNT3O95395 438 aa20.69■□□□□ 0.9
UBXN1-211ENST00000531056 GLUD1P00367 558 aa20.69■□□□□ 0.9
UBXN1-211ENST00000531056 C1RP00736 705 aa20.69■□□□□ 0.9
UBXN1-211ENST00000531056 MYBP10242 640 aa20.69■□□□□ 0.9
UBXN1-211ENST00000531056 FGFR3P22607 806 aa20.69■□□□□ 0.9
UBXN1-211ENST00000531056 KANK3Q6NY19 840 aa20.69■□□□□ 0.9
UBXN1-211ENST00000531056 LNX1Q8TBB1 728 aaPredicted RBP20.69■□□□□ 0.9
UBXN1-211ENST00000531056 FEZF2Q8TBJ5 459 aa20.69■□□□□ 0.9
UBXN1-211ENST00000531056 LEO1Q8WVC0 666 aaPredicted RBP20.69■□□□□ 0.9
UBXN1-211ENST00000531056 LRRC27Q9C0I9 530 aa20.69■□□□□ 0.9
UBXN1-211ENST00000531056 MAGEF1Q9HAY2 307 aa20.69■□□□□ 0.9
UBXN1-211ENST00000531056 MAN1C1Q9NR34 630 aa20.69■□□□□ 0.9
UBXN1-211ENST00000531056 FAM13BQ9NYF5 915 aa20.69■□□□□ 0.9
UBXN1-211ENST00000531056 TUBGCP4Q9UGJ1 667 aa20.69■□□□□ 0.9
UBXN1-211ENST00000531056 CPSF3Q9UKF6 684 aaKnown RBP20.69■□□□□ 0.9
UBXN1-211ENST00000531056 LACTBL1A8MY62 500 aa20.68■□□□□ 0.9
UBXN1-211ENST00000531056 POLR2DO15514 142 aaKnown RBP20.68■□□□□ 0.9
UBXN1-211ENST00000531056 RPL17P18621 184 aaKnown RBP20.68■□□□□ 0.9
UBXN1-211ENST00000531056 RPL9P32969 192 aaKnown RBP20.68■□□□□ 0.9
UBXN1-211ENST00000531056 BRCC3P46736 316 aa20.68■□□□□ 0.9
UBXN1-211ENST00000531056 KRT85P78386 507 aa20.68■□□□□ 0.9
UBXN1-211ENST00000531056 PPP2R3AQ06190 1150 aa20.68■□□□□ 0.9
UBXN1-211ENST00000531056 ALCAMQ13740 583 aa20.68■□□□□ 0.9
UBXN1-211ENST00000531056 BECN1Q14457 450 aa20.68■□□□□ 0.9
UBXN1-211ENST00000531056 ZBTB6Q15916 424 aa20.68■□□□□ 0.9
UBXN1-211ENST00000531056 PSMD5Q16401 504 aa20.68■□□□□ 0.9
UBXN1-211ENST00000531056 SLFN12LQ6IEE8 588 aa20.68■□□□□ 0.9
UBXN1-211ENST00000531056 CES5AQ6NT32 575 aa20.68■□□□□ 0.9
UBXN1-211ENST00000531056 CEP57Q86XR8 500 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms