RNA–Protein interactions for RNA: ENST00000530990.1

LTBP3-219, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-219ENST00000530990 HERC2P3Q9BVR0 1158 aa12.93□□□□□ -0.34
LTBP3-219ENST00000530990 COLEC11Q9BWP8 271 aa12.93□□□□□ -0.34
LTBP3-219ENST00000530990 COL25A1Q9BXS0 654 aaPredicted RBP12.93□□□□□ -0.34
LTBP3-219ENST00000530990 PCIF1Q9H4Z3 704 aa12.93□□□□□ -0.34
LTBP3-219ENST00000530990 PLEKHA5Q9HAU0 1116 aa12.93□□□□□ -0.34
LTBP3-219ENST00000530990 SLC38A7Q9NVC3 462 aa12.93□□□□□ -0.34
LTBP3-219ENST00000530990 TUBGCP4Q9UGJ1 667 aa12.93□□□□□ -0.34
LTBP3-219ENST00000530990 ADAM28Q9UKQ2 775 aa12.93□□□□□ -0.34
LTBP3-219ENST00000530990 BRWD1Q9NSI6 2320 aa12.93□□□□□ -0.34
LTBP3-219ENST00000530990 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.92□□□□□ -0.34
LTBP3-219ENST00000530990 GOLGA8IPA6NC78 632 aa12.92□□□□□ -0.34
LTBP3-219ENST00000530990 GOLGA8JA6NMD2 632 aa12.92□□□□□ -0.34
LTBP3-219ENST00000530990 LACTBL1A8MY62 500 aa12.92□□□□□ -0.34
LTBP3-219ENST00000530990 TGFB1I1O43294 461 aa12.92□□□□□ -0.34
LTBP3-219ENST00000530990 RHOBTB3O94955 611 aa12.92□□□□□ -0.34
LTBP3-219ENST00000530990 EFEMP2O95967 443 aa12.92□□□□□ -0.34
LTBP3-219ENST00000530990 SOD2P04179 222 aa12.92□□□□□ -0.34
LTBP3-219ENST00000530990 NFICP08651 508 aa12.92□□□□□ -0.34
LTBP3-219ENST00000530990 CTSAP10619 480 aa12.92□□□□□ -0.34
LTBP3-219ENST00000530990 IGFBP6P24592 240 aaPredicted RBP12.92□□□□□ -0.34
LTBP3-219ENST00000530990 CA8P35219 290 aa12.92□□□□□ -0.34
LTBP3-219ENST00000530990 NRIP1P48552 1158 aa12.92□□□□□ -0.34
LTBP3-219ENST00000530990 CLCNKBP51801 687 aa12.92□□□□□ -0.34
LTBP3-219ENST00000530990 PSMD2Q13200 908 aa12.92□□□□□ -0.34
LTBP3-219ENST00000530990 SMC1AQ14683 1233 aaKnown RBP12.92□□□□□ -0.34
LTBP3-219ENST00000530990 PDE12Q6L8Q7 609 aaKnown RBP12.92□□□□□ -0.34
LTBP3-219ENST00000530990 FUT10Q6P4F1 479 aa12.92□□□□□ -0.34
LTBP3-219ENST00000530990 RBM23Q86U06 439 aaKnown RBP12.92□□□□□ -0.34
LTBP3-219ENST00000530990 C3orf58Q8NDZ4 430 aa12.92□□□□□ -0.34
LTBP3-219ENST00000530990 ERCC4Q92889 916 aaPredicted RBP12.92□□□□□ -0.34
LTBP3-219ENST00000530990 FAM212AQ96EL1 285 aa12.92□□□□□ -0.34
LTBP3-219ENST00000530990 KIF12Q96FN5 646 aa12.92□□□□□ -0.34
LTBP3-219ENST00000530990 CCDC34Q96HJ3 373 aa12.92□□□□□ -0.34
LTBP3-219ENST00000530990 TIGD1Q96MW7 591 aa12.92□□□□□ -0.34
LTBP3-219ENST00000530990 UROC1Q96N76 676 aa12.92□□□□□ -0.34
LTBP3-219ENST00000530990 FAM213AQ9BRX8 229 aa12.92□□□□□ -0.34
LTBP3-219ENST00000530990 GPR62Q9BZJ7 368 aa12.92□□□□□ -0.34
LTBP3-219ENST00000530990 AGPAT3Q9NRZ7 376 aa12.92□□□□□ -0.34
LTBP3-219ENST00000530990 SCN1AP35498 2009 aa12.91□□□□□ -0.34
LTBP3-219ENST00000530990 VCANP13611 3396 aa12.91□□□□□ -0.34
LTBP3-219ENST00000530990 C2orf71A6NGG8 1288 aa12.91□□□□□ -0.34
LTBP3-219ENST00000530990 TMEM189-UBE2V1I3L0A0 370 aa12.91□□□□□ -0.34
LTBP3-219ENST00000530990 PODXLO00592 558 aa12.91□□□□□ -0.34
LTBP3-219ENST00000530990 PER2O15055 1255 aa12.91□□□□□ -0.34
LTBP3-219ENST00000530990 LINC01565O15544 149 aa12.91□□□□□ -0.34
LTBP3-219ENST00000530990 ADRB2P07550 413 aa12.91□□□□□ -0.34
LTBP3-219ENST00000530990 GUCY2FP51841 1108 aa12.91□□□□□ -0.34
LTBP3-219ENST00000530990 WNT7BP56706 349 aa12.91□□□□□ -0.34
LTBP3-219ENST00000530990 UBE2HP62256 183 aa12.91□□□□□ -0.34
LTBP3-219ENST00000530990 KCNB1Q14721 858 aa12.91□□□□□ -0.34
LTBP3-219ENST00000530990 COL19A1Q14993 1142 aa12.91□□□□□ -0.34
LTBP3-219ENST00000530990 PTPN14Q15678 1187 aa12.91□□□□□ -0.34
LTBP3-219ENST00000530990 UPP1Q16831 310 aa12.91□□□□□ -0.34
LTBP3-219ENST00000530990 JADE1Q6IE81 842 aa12.91□□□□□ -0.34
LTBP3-219ENST00000530990 CD300LGQ6UXG3 332 aa12.91□□□□□ -0.34
LTBP3-219ENST00000530990 TAS1R1Q7RTX1 841 aa12.91□□□□□ -0.34
LTBP3-219ENST00000530990 BRSK2Q8IWQ3 736 aa12.91□□□□□ -0.34
LTBP3-219ENST00000530990 GPD1LQ8N335 351 aa12.91□□□□□ -0.34
LTBP3-219ENST00000530990 NOC3LQ8WTT2 800 aaKnown RBP12.91□□□□□ -0.34
LTBP3-219ENST00000530990 PPP2R3CQ969Q6 453 aa12.91□□□□□ -0.34
LTBP3-219ENST00000530990 CCDC47Q96A33 483 aaKnown RBP12.91□□□□□ -0.34
LTBP3-219ENST00000530990 B3GALT6Q96L58 329 aa12.91□□□□□ -0.34
LTBP3-219ENST00000530990 IGFLR1Q9H665 355 aa12.91□□□□□ -0.34
LTBP3-219ENST00000530990 NGRNQ9NPE2 291 aaKnown RBP12.91□□□□□ -0.34
LTBP3-219ENST00000530990 HSPBP1Q9NZL4 362 aa12.91□□□□□ -0.34
LTBP3-219ENST00000530990 THEGQ9P2T0 379 aa12.91□□□□□ -0.34
LTBP3-219ENST00000530990 UBQLN1Q9UMX0 589 aaKnown RBP12.91□□□□□ -0.34
LTBP3-219ENST00000530990 SF3B1O75533 1304 aaKnown RBP eCLIP12.9□□□□□ -0.34
LTBP3-219ENST00000530990 CLIC2O15247 247 aa12.9□□□□□ -0.34
LTBP3-219ENST00000530990 EXTL3O43909 919 aa12.9□□□□□ -0.34
LTBP3-219ENST00000530990 KINO60870 393 aaKnown RBP12.9□□□□□ -0.34
LTBP3-219ENST00000530990 TBX10O75333 385 aa12.9□□□□□ -0.34
LTBP3-219ENST00000530990 PRPF40AO75400 957 aaKnown RBP12.9□□□□□ -0.34
LTBP3-219ENST00000530990 TADA2AO75478 443 aa12.9□□□□□ -0.34
LTBP3-219ENST00000530990 B3GAT3O94766 335 aa12.9□□□□□ -0.34
LTBP3-219ENST00000530990 GLP2RO95838 553 aa12.9□□□□□ -0.34
LTBP3-219ENST00000530990 LDHAP00338 332 aaKnown RBP12.9□□□□□ -0.34
LTBP3-219ENST00000530990 URODP06132 367 aa12.9□□□□□ -0.34
LTBP3-219ENST00000530990 GLUD2P49448 558 aa12.9□□□□□ -0.34
LTBP3-219ENST00000530990 RBM10P98175 930 aaKnown RBP12.9□□□□□ -0.34
LTBP3-219ENST00000530990 ZBTB6Q15916 424 aa12.9□□□□□ -0.34
LTBP3-219ENST00000530990 DUSP6Q16828 381 aa12.9□□□□□ -0.34
LTBP3-219ENST00000530990 KNOP1Q1ED39 458 aaKnown RBP12.9□□□□□ -0.34
LTBP3-219ENST00000530990 CLEC17AQ6ZS10 378 aa12.9□□□□□ -0.34
LTBP3-219ENST00000530990 HS2ST1Q7LGA3 356 aa12.9□□□□□ -0.34
LTBP3-219ENST00000530990 CD302Q8IX05 232 aa12.9□□□□□ -0.34
LTBP3-219ENST00000530990 EFCAB13Q8IY85 973 aa12.9□□□□□ -0.34
LTBP3-219ENST00000530990 MRPL43Q8N983 215 aaKnown RBP12.9□□□□□ -0.34
LTBP3-219ENST00000530990 PABPC5Q96DU9 382 aaKnown RBP12.9□□□□□ -0.34
LTBP3-219ENST00000530990 TLE6Q9H808 572 aa12.9□□□□□ -0.34
LTBP3-219ENST00000530990 UBE2ZQ9H832 354 aaPredicted RBP12.9□□□□□ -0.34
LTBP3-219ENST00000530990 CLDND1Q9NY35 253 aa12.9□□□□□ -0.34
LTBP3-219ENST00000530990 RBAKQ9NYW8 714 aaPredicted RBP12.9□□□□□ -0.34
LTBP3-219ENST00000530990 STK39Q9UEW8 545 aa12.9□□□□□ -0.34
LTBP3-219ENST00000530990 IRAK3Q9Y616 596 aa12.9□□□□□ -0.34
LTBP3-219ENST00000530990 XIRP2A4UGR9 3374 aa12.89□□□□□ -0.35
LTBP3-219ENST00000530990 C2CD2LO14523 706 aa12.89□□□□□ -0.35
LTBP3-219ENST00000530990 KIAA0391O15091 583 aaKnown RBP12.89□□□□□ -0.35
LTBP3-219ENST00000530990 CXCL14O95715 111 aa12.89□□□□□ -0.35
LTBP3-219ENST00000530990 LRPAP1P30533 357 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms