RNA–Protein interactions for RNA: ENST00000529851.5

APLF-206, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 5

Gene APLF, Length 2,863 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-206ENST00000529851 CACNB1Q02641 598 aaPredicted RBP16.72■□□□□ 0.27
APLF-206ENST00000529851 LRRC63Q05C16 580 aa16.72■□□□□ 0.27
APLF-206ENST00000529851 SPA17Q15506 151 aa16.72■□□□□ 0.27
APLF-206ENST00000529851 UAP1Q16222 522 aaPredicted RBP16.72■□□□□ 0.27
APLF-206ENST00000529851 EPM2AIP1Q7L775 607 aaPredicted RBP16.72■□□□□ 0.27
APLF-206ENST00000529851 DDX42Q86XP3 938 aaKnown RBP eCLIP16.72■□□□□ 0.27
APLF-206ENST00000529851 MCPH1Q8NEM0 835 aa16.72■□□□□ 0.27
APLF-206ENST00000529851 UBLCP1Q8WVY7 318 aaPredicted RBP16.72■□□□□ 0.27
APLF-206ENST00000529851 PCMTD1Q96MG8 357 aaPredicted RBP16.72■□□□□ 0.27
APLF-206ENST00000529851 PLEKHG4BQ96PX9 1271 aa16.72■□□□□ 0.27
APLF-206ENST00000529851 ELAC2Q9BQ52 826 aaKnown RBP16.72■□□□□ 0.27
APLF-206ENST00000529851 IFIH1Q9BYX4 1025 aaKnown RBP16.72■□□□□ 0.27
APLF-206ENST00000529851 BUB1O43683 1085 aa16.72■□□□□ 0.27
APLF-206ENST00000529851 SNAI1O95863 264 aaPredicted RBP16.72■□□□□ 0.27
APLF-206ENST00000529851 ALADP13716 330 aa16.72■□□□□ 0.27
APLF-206ENST00000529851 HOXD10P28358 340 aa16.72■□□□□ 0.27
APLF-206ENST00000529851 GIT2Q14161 759 aa16.72■□□□□ 0.27
APLF-206ENST00000529851 ANKRD40Q6AI12 368 aa16.72■□□□□ 0.27
APLF-206ENST00000529851 RINT1Q6NUQ1 792 aa16.72■□□□□ 0.27
APLF-206ENST00000529851 SYCP3Q8IZU3 236 aa16.72■□□□□ 0.27
APLF-206ENST00000529851 SPIRE2Q8WWL2 714 aa16.72■□□□□ 0.27
APLF-206ENST00000529851 DDX12PQ92771 950 aa16.72■□□□□ 0.27
APLF-206ENST00000529851 NTPCRQ9BSD7 190 aaKnown RBP16.72■□□□□ 0.27
APLF-206ENST00000529851 STRA6Q9BX79 667 aa16.72■□□□□ 0.27
APLF-206ENST00000529851 PCDHGA4Q9Y5G9 962 aa16.72■□□□□ 0.27
APLF-206ENST00000529851 CFAP73A6NFT4 308 aa16.71■□□□□ 0.27
APLF-206ENST00000529851 HGSO14964 777 aaPredicted RBP16.71■□□□□ 0.27
APLF-206ENST00000529851 UBOX5O94941 541 aa16.71■□□□□ 0.27
APLF-206ENST00000529851 PCK1P35558 622 aa16.71■□□□□ 0.27
APLF-206ENST00000529851 SPAG1Q07617 926 aa16.71■□□□□ 0.27
APLF-206ENST00000529851 ADAM9Q13443 819 aa16.71■□□□□ 0.27
APLF-206ENST00000529851 TRPM8Q7Z2W7 1104 aa16.71■□□□□ 0.27
APLF-206ENST00000529851 KLHL7Q8IXQ5 586 aa16.71■□□□□ 0.27
APLF-206ENST00000529851 CCDC42Q96M95 316 aa16.71■□□□□ 0.27
APLF-206ENST00000529851 DUSP9Q99956 384 aaKnown RBP16.71■□□□□ 0.27
APLF-206ENST00000529851 WDR35Q9P2L0 1181 aa16.71■□□□□ 0.27
APLF-206ENST00000529851 FGFR1OPO95684 399 aaKnown RBP16.71■□□□□ 0.27
APLF-206ENST00000529851 IMPDH2P12268 514 aa16.71■□□□□ 0.27
APLF-206ENST00000529851 RARRES1P49788 294 aa16.71■□□□□ 0.27
APLF-206ENST00000529851 LACTBP83111 547 aaPredicted RBP16.71■□□□□ 0.27
APLF-206ENST00000529851 POU5F1BQ06416 359 aa16.71■□□□□ 0.27
APLF-206ENST00000529851 ARSHQ5FYA8 562 aa16.71■□□□□ 0.27
APLF-206ENST00000529851 ZNF662Q6ZS27 426 aa16.71■□□□□ 0.27
APLF-206ENST00000529851 DPP9Q86TI2 863 aa16.71■□□□□ 0.27
APLF-206ENST00000529851 C1orf131Q8NDD1 294 aaKnown RBP16.71■□□□□ 0.27
APLF-206ENST00000529851 WHAMMQ8TF30 809 aa16.71■□□□□ 0.27
APLF-206ENST00000529851 KIFAP3Q92845 792 aa16.71■□□□□ 0.27
APLF-206ENST00000529851 GPR20Q99678 358 aa16.71■□□□□ 0.27
APLF-206ENST00000529851 UPF3AQ9H1J1 476 aaKnown RBP16.71■□□□□ 0.27
APLF-206ENST00000529851 PLCB1Q9NQ66 1216 aa16.71■□□□□ 0.27
APLF-206ENST00000529851 NRBP2Q9NSY0 501 aa16.71■□□□□ 0.27
APLF-206ENST00000529851 TBC1D7Q9P0N9 293 aa16.71■□□□□ 0.27
APLF-206ENST00000529851 SALL4Q9UJQ4 1053 aa16.71■□□□□ 0.27
APLF-206ENST00000529851 BLOC1S6Q9UL45 172 aa16.71■□□□□ 0.27
APLF-206ENST00000529851 ZMYND8Q9ULU4 1186 aaPredicted RBP16.71■□□□□ 0.27
APLF-206ENST00000529851 GSTTP1A0A1W2PQM5 241 aa16.71■□□□□ 0.26
APLF-206ENST00000529851 H0YGN5 161 aa16.71■□□□□ 0.26
APLF-206ENST00000529851 DGAT1O75907 488 aa16.71■□□□□ 0.26
APLF-206ENST00000529851 RPLP2P05387 115 aaKnown RBP16.71■□□□□ 0.26
APLF-206ENST00000529851 HSPA9P38646 679 aaKnown RBP16.71■□□□□ 0.26
APLF-206ENST00000529851 MAGEA8P43361 318 aa16.71■□□□□ 0.26
APLF-206ENST00000529851 UBXN2AP68543 259 aa16.71■□□□□ 0.26
APLF-206ENST00000529851 KIF22Q14807 665 aa16.71■□□□□ 0.26
APLF-206ENST00000529851 TARBP2Q15633 366 aaKnown RBP16.71■□□□□ 0.26
APLF-206ENST00000529851 PXYLP1Q8TE99 480 aa16.71■□□□□ 0.26
APLF-206ENST00000529851 RPS6KC1Q96S38 1066 aa16.71■□□□□ 0.26
APLF-206ENST00000529851 TLR10Q9BXR5 811 aa16.71■□□□□ 0.26
APLF-206ENST00000529851 SEZ6LQ9BYH1 1024 aa16.71■□□□□ 0.26
APLF-206ENST00000529851 OCEL1Q9H607 264 aa16.71■□□□□ 0.26
APLF-206ENST00000529851 ADAM22Q9P0K1 906 aa16.71■□□□□ 0.26
APLF-206ENST00000529851 NFS1Q9Y697 457 aa16.71■□□□□ 0.26
APLF-206ENST00000529851 DOCK5Q9H7D0 1870 aa16.7■□□□□ 0.26
APLF-206ENST00000529851 USO1O60763 962 aaKnown RBP16.7■□□□□ 0.26
APLF-206ENST00000529851 GSTA1P08263 222 aa16.7■□□□□ 0.26
APLF-206ENST00000529851 NCALDP61601 193 aa16.7■□□□□ 0.26
APLF-206ENST00000529851 ARHGAP1Q07960 439 aa16.7■□□□□ 0.26
APLF-206ENST00000529851 MKRN4PQ13434 485 aaPredicted RBP16.7■□□□□ 0.26
APLF-206ENST00000529851 MEA1Q16626 185 aa16.7■□□□□ 0.26
APLF-206ENST00000529851 CFAP221Q4G0U5 840 aa16.7■□□□□ 0.26
APLF-206ENST00000529851 CENPPQ6IPU0 288 aa16.7■□□□□ 0.26
APLF-206ENST00000529851 GPBP1Q86WP2 473 aa16.7■□□□□ 0.26
APLF-206ENST00000529851 CSGALNACT2Q8N6G5 542 aa16.7■□□□□ 0.26
APLF-206ENST00000529851 XPO6Q96QU8 1125 aaKnown RBP16.7■□□□□ 0.26
APLF-206ENST00000529851 SMARCAD1Q9H4L7 1026 aa16.7■□□□□ 0.26
APLF-206ENST00000529851 SUDS3Q9H7L9 328 aaPredicted RBP16.7■□□□□ 0.26
APLF-206ENST00000529851 ECT2Q9H8V3 914 aa16.7■□□□□ 0.26
APLF-206ENST00000529851 TRIM33Q9UPN9 1127 aa16.7■□□□□ 0.26
APLF-206ENST00000529851 SHBGP04278 402 aa16.7■□□□□ 0.26
APLF-206ENST00000529851 YWHABP31946 246 aaKnown RBP16.7■□□□□ 0.26
APLF-206ENST00000529851 SP2Q02086 613 aa16.7■□□□□ 0.26
APLF-206ENST00000529851 ACVR2BQ13705 512 aa16.7■□□□□ 0.26
APLF-206ENST00000529851 LONP2Q86WA8 852 aa16.7■□□□□ 0.26
APLF-206ENST00000529851 THAP9Q9H5L6 903 aa16.7■□□□□ 0.26
APLF-206ENST00000529851 ZNF302Q9NR11 478 aa16.7■□□□□ 0.26
APLF-206ENST00000529851 POTEFA5A3E0 1075 aa16.69■□□□□ 0.26
APLF-206ENST00000529851 PSMA7O14818 248 aa16.69■□□□□ 0.26
APLF-206ENST00000529851 RAD51CO43502 376 aa16.69■□□□□ 0.26
APLF-206ENST00000529851 PAEPP09466 180 aa16.69■□□□□ 0.26
APLF-206ENST00000529851 SETSIPP0DME0 302 aa16.69■□□□□ 0.26
APLF-206ENST00000529851 CCNE1P24864 410 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms