RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 DNASE1L2Q92874 299 aa12.74□□□□□ -0.37
CMTM1-211ENST00000528484 IFT74Q96LB3 600 aa12.74□□□□□ -0.37
CMTM1-211ENST00000528484 IER2Q9BTL4 223 aa12.74□□□□□ -0.37
CMTM1-211ENST00000528484 PDZD7Q9H5P4 517 aa12.74□□□□□ -0.37
CMTM1-211ENST00000528484 BRD9Q9H8M2 597 aa12.74□□□□□ -0.37
CMTM1-211ENST00000528484 ORC3Q9UBD5 711 aaPredicted RBP12.74□□□□□ -0.37
CMTM1-211ENST00000528484 MTRRQ9UBK8 725 aa12.74□□□□□ -0.37
CMTM1-211ENST00000528484 CDY1Q9Y6F8 540 aa12.74□□□□□ -0.37
CMTM1-211ENST00000528484 TPRP12270 2363 aaKnown RBP12.74□□□□□ -0.37
CMTM1-211ENST00000528484 PATJQ8NI35 1801 aa12.74□□□□□ -0.37
CMTM1-211ENST00000528484 GPR179Q6PRD1 2367 aa12.73□□□□□ -0.37
CMTM1-211ENST00000528484 ARHGEF35A5YM69 484 aa12.73□□□□□ -0.37
CMTM1-211ENST00000528484 TMEM189-UBE2V1I3L0A0 370 aa12.73□□□□□ -0.37
CMTM1-211ENST00000528484 PRRG1O14668 218 aa12.73□□□□□ -0.37
CMTM1-211ENST00000528484 PTGESO14684 152 aa12.73□□□□□ -0.37
CMTM1-211ENST00000528484 ZNF197O14709 1029 aa12.73□□□□□ -0.37
CMTM1-211ENST00000528484 RHOP08100 348 aa12.73□□□□□ -0.37
CMTM1-211ENST00000528484 PTPN2P17706 415 aa12.73□□□□□ -0.37
CMTM1-211ENST00000528484 YARSP54577 528 aaKnown RBP12.73□□□□□ -0.37
CMTM1-211ENST00000528484 ANKRD1Q15327 319 aa12.73□□□□□ -0.37
CMTM1-211ENST00000528484 NOSTRINQ8IVI9 506 aa12.73□□□□□ -0.37
CMTM1-211ENST00000528484 CLDN23Q96B33 292 aa12.73□□□□□ -0.37
CMTM1-211ENST00000528484 ELSPBP1Q96BH3 223 aa12.73□□□□□ -0.37
CMTM1-211ENST00000528484 MCRS1Q96EZ8 462 aa12.73□□□□□ -0.37
CMTM1-211ENST00000528484 NACC1Q96RE7 527 aa12.73□□□□□ -0.37
CMTM1-211ENST00000528484 RTKNQ9BST9 563 aa12.73□□□□□ -0.37
CMTM1-211ENST00000528484 FZD8Q9H461 694 aa12.73□□□□□ -0.37
CMTM1-211ENST00000528484 TUFT1Q9NNX1 390 aa12.73□□□□□ -0.37
CMTM1-211ENST00000528484 GPRC5CQ9NQ84 441 aa12.73□□□□□ -0.37
CMTM1-211ENST00000528484 HCFC1R1Q9NWW0 138 aa12.73□□□□□ -0.37
CMTM1-211ENST00000528484 DNMT3BQ9UBC3 853 aaKnown RBP12.73□□□□□ -0.37
CMTM1-211ENST00000528484 GDAQ9Y2T3 454 aa12.73□□□□□ -0.37
CMTM1-211ENST00000528484 MTF2Q9Y483 593 aaPredicted RBP12.73□□□□□ -0.37
CMTM1-211ENST00000528484 BACE2Q9Y5Z0 518 aa12.73□□□□□ -0.37
CMTM1-211ENST00000528484 EPG5Q9HCE0 2579 aa12.72□□□□□ -0.37
CMTM1-211ENST00000528484 ACKR2O00590 384 aa12.72□□□□□ -0.37
CMTM1-211ENST00000528484 ADAM12O43184 909 aa12.72□□□□□ -0.37
CMTM1-211ENST00000528484 FGFR3P22607 806 aa12.72□□□□□ -0.37
CMTM1-211ENST00000528484 TARSP26639 723 aaKnown RBP12.72□□□□□ -0.37
CMTM1-211ENST00000528484 NAMPTP43490 491 aa12.72□□□□□ -0.37
CMTM1-211ENST00000528484 EFNA5P52803 228 aa12.72□□□□□ -0.37
CMTM1-211ENST00000528484 ATXN1P54253 815 aaKnown RBP12.72□□□□□ -0.37
CMTM1-211ENST00000528484 NR5A1Q13285 461 aa12.72□□□□□ -0.37
CMTM1-211ENST00000528484 CYP4A22Q5TCH4 519 aa12.72□□□□□ -0.37
CMTM1-211ENST00000528484 IQCEQ6IPM2 695 aa12.72□□□□□ -0.37
CMTM1-211ENST00000528484 PDZD4Q76G19 769 aaPredicted RBP12.72□□□□□ -0.37
CMTM1-211ENST00000528484 IRF7Q92985 503 aa12.72□□□□□ -0.37
CMTM1-211ENST00000528484 CNTNAP3BQ96NU0 1288 aa12.72□□□□□ -0.37
CMTM1-211ENST00000528484 CNTNAP3Q9BZ76 1288 aa12.72□□□□□ -0.37
CMTM1-211ENST00000528484 ZFP14Q9HCL3 533 aa12.72□□□□□ -0.37
CMTM1-211ENST00000528484 AVENQ9NQS1 362 aaPredicted RBP12.72□□□□□ -0.37
CMTM1-211ENST00000528484 HEBP1Q9NRV9 189 aa12.72□□□□□ -0.37
CMTM1-211ENST00000528484 TOPORSQ9NS56 1045 aaPredicted RBP12.72□□□□□ -0.37
CMTM1-211ENST00000528484 NDRG2Q9UN36 371 aaKnown RBP12.72□□□□□ -0.37
CMTM1-211ENST00000528484 SPTBN2O15020 2390 aa12.71□□□□□ -0.37
CMTM1-211ENST00000528484 H7C4K7 107 aa12.71□□□□□ -0.37
CMTM1-211ENST00000528484 PFKFB2O60825 505 aa12.71□□□□□ -0.37
CMTM1-211ENST00000528484 CCR3P51677 355 aa12.71□□□□□ -0.37
CMTM1-211ENST00000528484 CLCNKBP51801 687 aa12.71□□□□□ -0.37
CMTM1-211ENST00000528484 DDX27Q96GQ7 796 aaKnown RBP12.71□□□□□ -0.37
CMTM1-211ENST00000528484 CORO1BQ9BR76 489 aa12.71□□□□□ -0.37
CMTM1-211ENST00000528484 TRMT61BQ9BVS5 477 aaKnown RBP12.71□□□□□ -0.37
CMTM1-211ENST00000528484 CCDC94Q9BW85 323 aaPredicted RBP12.71□□□□□ -0.37
CMTM1-211ENST00000528484 PRMT8Q9NR22 394 aaPredicted RBP12.71□□□□□ -0.37
CMTM1-211ENST00000528484 GJB4Q9NTQ9 266 aa12.71□□□□□ -0.37
CMTM1-211ENST00000528484 SLC38A7Q9NVC3 462 aa12.71□□□□□ -0.37
CMTM1-211ENST00000528484 ACACBO00763 2458 aa12.7□□□□□ -0.38
CMTM1-211ENST00000528484 PHLPP2Q6ZVD8 1323 aa12.7□□□□□ -0.38
CMTM1-211ENST00000528484 LILRB5O75023 590 aa12.7□□□□□ -0.38
CMTM1-211ENST00000528484 TKTP29401 623 aaKnown RBP12.7□□□□□ -0.38
CMTM1-211ENST00000528484 ARPP19P56211 112 aa12.7□□□□□ -0.38
CMTM1-211ENST00000528484 MTAPQ13126 283 aa12.7□□□□□ -0.38
CMTM1-211ENST00000528484 SAFBQ15424 915 aaKnown RBP eCLIP12.7□□□□□ -0.38
CMTM1-211ENST00000528484 NAB2Q15742 525 aa12.7□□□□□ -0.38
CMTM1-211ENST00000528484 EARS2Q5JPH6 523 aaKnown RBP12.7□□□□□ -0.38
CMTM1-211ENST00000528484 GLRA4Q5JXX5 417 aa12.7□□□□□ -0.38
CMTM1-211ENST00000528484 ATF7IP2Q5U623 682 aa12.7□□□□□ -0.38
CMTM1-211ENST00000528484 HAUS3Q68CZ6 603 aa12.7□□□□□ -0.38
CMTM1-211ENST00000528484 LAIR1Q6GTX8 287 aa12.7□□□□□ -0.38
CMTM1-211ENST00000528484 C1orf228Q6PIY5 440 aa12.7□□□□□ -0.38
CMTM1-211ENST00000528484 TSSK4Q6SA08 328 aa12.7□□□□□ -0.38
CMTM1-211ENST00000528484 PADI6Q6TGC4 694 aa12.7□□□□□ -0.38
CMTM1-211ENST00000528484 PRR23BQ6ZRT6 265 aa12.7□□□□□ -0.38
CMTM1-211ENST00000528484 CELF5Q8N6W0 485 aaKnown RBP12.7□□□□□ -0.38
CMTM1-211ENST00000528484 ZNF461Q8TAF7 563 aa12.7□□□□□ -0.38
CMTM1-211ENST00000528484 CYP4F11Q9HBI6 524 aa12.7□□□□□ -0.38
CMTM1-211ENST00000528484 NUB1Q9Y5A7 615 aa12.7□□□□□ -0.38
CMTM1-211ENST00000528484 VWA8A3KMH1 1905 aa12.7□□□□□ -0.38
CMTM1-211ENST00000528484 A0A087WWV3 80 aa12.69□□□□□ -0.38
CMTM1-211ENST00000528484 ARHGEF37A1IGU5 675 aa12.69□□□□□ -0.38
CMTM1-211ENST00000528484 FAM205CA6NFA0 338 aa12.69□□□□□ -0.38
CMTM1-211ENST00000528484 SYN3O14994 580 aa12.69□□□□□ -0.38
CMTM1-211ENST00000528484 FOXD2O60548 495 aaPredicted RBP12.69□□□□□ -0.38
CMTM1-211ENST00000528484 LRP3O75074 770 aa12.69□□□□□ -0.38
CMTM1-211ENST00000528484 MICAL2O94851 1124 aa12.69□□□□□ -0.38
CMTM1-211ENST00000528484 CEBPBP17676 345 aa12.69□□□□□ -0.38
CMTM1-211ENST00000528484 PSMC3P17980 439 aa12.69□□□□□ -0.38
CMTM1-211ENST00000528484 ROR1Q01973 937 aa12.69□□□□□ -0.38
CMTM1-211ENST00000528484 UPP1Q16831 310 aa12.69□□□□□ -0.38
CMTM1-211ENST00000528484 TANGO2Q6ICL3 276 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms