RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 KCNH3Q9ULD8 1083 aa25.94■■□□□ 1.74
CPSF1-202ENST00000527827 CDY1Q9Y6F8 540 aa25.94■■□□□ 1.74
CPSF1-202ENST00000527827 MUTP22033 750 aa25.93■■□□□ 1.74
CPSF1-202ENST00000527827 EFNA5P52803 228 aa25.93■■□□□ 1.74
CPSF1-202ENST00000527827 PRKCQQ04759 706 aa25.93■■□□□ 1.74
CPSF1-202ENST00000527827 MLF2Q15773 248 aaPredicted RBP25.93■■□□□ 1.74
CPSF1-202ENST00000527827 UPP1Q16831 310 aa25.93■■□□□ 1.74
CPSF1-202ENST00000527827 PABPC1LQ4VXU2 614 aaKnown RBP25.93■■□□□ 1.74
CPSF1-202ENST00000527827 SLC44A4Q53GD3 710 aa25.93■■□□□ 1.74
CPSF1-202ENST00000527827 ZC3H14Q6PJT7 736 aaKnown RBP25.93■■□□□ 1.74
CPSF1-202ENST00000527827 DDX27Q96GQ7 796 aaKnown RBP25.93■■□□□ 1.74
CPSF1-202ENST00000527827 IFT74Q96LB3 600 aa25.93■■□□□ 1.74
CPSF1-202ENST00000527827 MTF2Q9Y483 593 aaPredicted RBP25.93■■□□□ 1.74
CPSF1-202ENST00000527827 BACE2Q9Y5Z0 518 aa25.93■■□□□ 1.74
CPSF1-202ENST00000527827 FRYLO94915 3013 aa25.93■■□□□ 1.74
CPSF1-202ENST00000527827 I3L4J1 428 aa25.92■■□□□ 1.74
CPSF1-202ENST00000527827 BRCC3P46736 316 aa25.92■■□□□ 1.74
CPSF1-202ENST00000527827 RTL10Q7L3V2 364 aa25.92■■□□□ 1.74
CPSF1-202ENST00000527827 KIAA2013Q8IYS2 634 aa25.92■■□□□ 1.74
CPSF1-202ENST00000527827 ING5Q8WYH8 240 aa25.92■■□□□ 1.74
CPSF1-202ENST00000527827 KIFAP3Q92845 792 aa25.92■■□□□ 1.74
CPSF1-202ENST00000527827 UROC1Q96N76 676 aa25.92■■□□□ 1.74
CPSF1-202ENST00000527827 BHMT2Q9H2M3 363 aa25.92■■□□□ 1.74
CPSF1-202ENST00000527827 DAXXQ9UER7 740 aaPredicted RBP25.92■■□□□ 1.74
CPSF1-202ENST00000527827 SOX4Q06945 474 aaPredicted RBP25.91■■□□□ 1.74
CPSF1-202ENST00000527827 HAUS3Q68CZ6 603 aa25.91■■□□□ 1.74
CPSF1-202ENST00000527827 POTEHQ6S545 545 aa25.91■■□□□ 1.74
CPSF1-202ENST00000527827 C4orf32Q8N8J7 132 aa25.91■■□□□ 1.74
CPSF1-202ENST00000527827 CEP120Q8N960 986 aa25.91■■□□□ 1.74
CPSF1-202ENST00000527827 RMDN1Q96DB5 314 aa25.91■■□□□ 1.74
CPSF1-202ENST00000527827 C8orf76Q96K31 380 aa25.91■■□□□ 1.74
CPSF1-202ENST00000527827 TNFSF13BQ9Y275 285 aa25.91■■□□□ 1.74
CPSF1-202ENST00000527827 SMIM28A0A1B0GU29 152 aa25.9■■□□□ 1.74
CPSF1-202ENST00000527827 CCT6AP40227 531 aaKnown RBP25.9■■□□□ 1.74
CPSF1-202ENST00000527827 PFKPQ01813 784 aa25.9■■□□□ 1.74
CPSF1-202ENST00000527827 SLC5A9Q2M3M2 681 aa25.9■■□□□ 1.74
CPSF1-202ENST00000527827 XKR4Q5GH76 650 aa25.9■■□□□ 1.74
CPSF1-202ENST00000527827 TTC38Q5R3I4 469 aa25.9■■□□□ 1.74
CPSF1-202ENST00000527827 ANKS3Q6ZW76 656 aa25.9■■□□□ 1.74
CPSF1-202ENST00000527827 OSBPL6Q9BZF3 934 aa25.9■■□□□ 1.74
CPSF1-202ENST00000527827 FOXP1Q9H334 677 aaPredicted RBP25.9■■□□□ 1.74
CPSF1-202ENST00000527827 MRPS23Q9Y3D9 190 aaKnown RBP25.9■■□□□ 1.74
CPSF1-202ENST00000527827 GPR179Q6PRD1 2367 aa25.89■■□□□ 1.74
CPSF1-202ENST00000527827 K7ERI5 159 aa25.89■■□□□ 1.74
CPSF1-202ENST00000527827 TRAPPC3O43617 180 aa25.89■■□□□ 1.74
CPSF1-202ENST00000527827 GRM5P41594 1212 aa25.89■■□□□ 1.74
CPSF1-202ENST00000527827 FXR2P51116 673 aaKnown RBP eCLIP25.89■■□□□ 1.741e-8■■■□□ 15.1
CPSF1-202ENST00000527827 UBXN2BQ14CS0 331 aa25.89■■□□□ 1.74
CPSF1-202ENST00000527827 ALKAL1Q6UXT8 129 aa25.89■■□□□ 1.74
CPSF1-202ENST00000527827 SUMF1Q8NBK3 374 aa25.89■■□□□ 1.74
CPSF1-202ENST00000527827 BCO2Q9BYV7 579 aa25.89■■□□□ 1.74
CPSF1-202ENST00000527827 CDT1Q9H211 546 aa25.89■■□□□ 1.74
CPSF1-202ENST00000527827 LTB4R2Q9NPC1 389 aa25.89■■□□□ 1.74
CPSF1-202ENST00000527827 KIAA1024Q9UPX6 916 aa25.89■■□□□ 1.74
CPSF1-202ENST00000527827 CEP250Q9BV73 2442 aa25.88■■□□□ 1.73
CPSF1-202ENST00000527827 FAM170BA6NMN3 283 aa25.88■■□□□ 1.73
CPSF1-202ENST00000527827 RHOP08100 348 aa25.88■■□□□ 1.73
CPSF1-202ENST00000527827 CD72P21854 359 aa25.88■■□□□ 1.73
CPSF1-202ENST00000527827 ROR1Q01973 937 aa25.88■■□□□ 1.73
CPSF1-202ENST00000527827 SLC8B1Q6J4K2 584 aa25.88■■□□□ 1.73
CPSF1-202ENST00000527827 APBB1IPQ7Z5R6 666 aaPredicted RBP25.88■■□□□ 1.73
CPSF1-202ENST00000527827 DCLK2Q8N568 766 aa25.88■■□□□ 1.73
CPSF1-202ENST00000527827 RUBCNQ92622 972 aa25.88■■□□□ 1.73
CPSF1-202ENST00000527827 MCRS1Q96EZ8 462 aa25.88■■□□□ 1.73
CPSF1-202ENST00000527827 ACO2Q99798 780 aaKnown RBP25.88■■□□□ 1.73
CPSF1-202ENST00000527827 PLA2G2FQ9BZM2 168 aa25.88■■□□□ 1.73
CPSF1-202ENST00000527827 PTPRHQ9HD43 1115 aa25.88■■□□□ 1.73
CPSF1-202ENST00000527827 AVENQ9NQS1 362 aaPredicted RBP25.88■■□□□ 1.73
CPSF1-202ENST00000527827 SPATA6Q9NWH7 488 aaPredicted RBP25.88■■□□□ 1.73
CPSF1-202ENST00000527827 CITO14578 2027 aa25.88■■□□□ 1.73
CPSF1-202ENST00000527827 ARHGEF37A1IGU5 675 aa25.87■■□□□ 1.73
CPSF1-202ENST00000527827 ECI2O75521 394 aa25.87■■□□□ 1.73
CPSF1-202ENST00000527827 NBR1Q14596 966 aa25.87■■□□□ 1.73
CPSF1-202ENST00000527827 ZNF528Q3MIS6 628 aa25.87■■□□□ 1.73
CPSF1-202ENST00000527827 TAS1R3Q7RTX0 852 aa25.87■■□□□ 1.73
CPSF1-202ENST00000527827 CCDC83Q8IWF9 413 aa25.87■■□□□ 1.73
CPSF1-202ENST00000527827 DAW1Q8N136 415 aa25.87■■□□□ 1.73
CPSF1-202ENST00000527827 ZNF461Q8TAF7 563 aa25.87■■□□□ 1.73
CPSF1-202ENST00000527827 CCDC94Q9BW85 323 aaPredicted RBP25.87■■□□□ 1.73
CPSF1-202ENST00000527827 DDX19AQ9NUU7 478 aaKnown RBP25.87■■□□□ 1.73
CPSF1-202ENST00000527827 GDE1Q9NZC3 331 aa25.87■■□□□ 1.73
CPSF1-202ENST00000527827 LRWD1Q9UFC0 647 aa25.87■■□□□ 1.73
CPSF1-202ENST00000527827 FBXO4Q9UKT5 387 aa25.87■■□□□ 1.73
CPSF1-202ENST00000527827 PHLPP2Q6ZVD8 1323 aa25.87■■□□□ 1.73
CPSF1-202ENST00000527827 WDR27A2RRH5 827 aa25.86■■□□□ 1.73
CPSF1-202ENST00000527827 TBC1D4O60343 1298 aa25.86■■□□□ 1.73
CPSF1-202ENST00000527827 ABLIM3O94929 683 aa25.86■■□□□ 1.73
CPSF1-202ENST00000527827 CEBPBP17676 345 aa25.86■■□□□ 1.73
CPSF1-202ENST00000527827 NPTX2P47972 431 aa25.86■■□□□ 1.73
CPSF1-202ENST00000527827 YARSP54577 528 aaKnown RBP25.86■■□□□ 1.73
CPSF1-202ENST00000527827 PEX3P56589 373 aa25.86■■□□□ 1.73
CPSF1-202ENST00000527827 OSTNP61366 133 aa25.86■■□□□ 1.73
CPSF1-202ENST00000527827 VARS2Q5ST30 1063 aaKnown RBP25.86■■□□□ 1.73
CPSF1-202ENST00000527827 FBXO18Q8NFZ0 1043 aa25.86■■□□□ 1.73
CPSF1-202ENST00000527827 ZMAT2Q96NC0 199 aaKnown RBP25.86■■□□□ 1.73
CPSF1-202ENST00000527827 HINFPQ9BQA5 517 aa25.86■■□□□ 1.73
CPSF1-202ENST00000527827 TOPORSQ9NS56 1045 aaPredicted RBP25.86■■□□□ 1.73
CPSF1-202ENST00000527827 CCDC169A6NNP5 214 aa25.85■■□□□ 1.73
CPSF1-202ENST00000527827 PODXLO00592 558 aa25.85■■□□□ 1.73
CPSF1-202ENST00000527827 LAMTOR5O43504 91 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms