RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 TRPV5Q9NQA5 729 aa13.61□□□□□ -0.23
SRPRA-202ENST00000527817 PRMT7Q9NVM4 692 aaPredicted RBP13.61□□□□□ -0.23
SRPRA-202ENST00000527817 SNTG2Q9NY99 539 aa13.61□□□□□ -0.23
SRPRA-202ENST00000527817 MTRRQ9UBK8 725 aa13.61□□□□□ -0.23
SRPRA-202ENST00000527817 KCNJ14Q9UNX9 436 aa13.61□□□□□ -0.23
SRPRA-202ENST00000527817 BACE2Q9Y5Z0 518 aa13.61□□□□□ -0.23
SRPRA-202ENST00000527817 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.61□□□□□ -0.23
SRPRA-202ENST00000527817 ARHGEF37A1IGU5 675 aa13.6□□□□□ -0.23
SRPRA-202ENST00000527817 TMEM189-UBE2V1I3L0A0 370 aa13.6□□□□□ -0.23
SRPRA-202ENST00000527817 TOB2Q14106 344 aaPredicted RBP13.6□□□□□ -0.23
SRPRA-202ENST00000527817 SLC5A9Q2M3M2 681 aa13.6□□□□□ -0.23
SRPRA-202ENST00000527817 CPLX2Q6PUV4 134 aaKnown RBP13.6□□□□□ -0.23
SRPRA-202ENST00000527817 CHAMP1Q96JM3 812 aa13.6□□□□□ -0.23
SRPRA-202ENST00000527817 TRMT61BQ9BVS5 477 aaKnown RBP13.6□□□□□ -0.23
SRPRA-202ENST00000527817 BRD9Q9H8M2 597 aa13.6□□□□□ -0.23
SRPRA-202ENST00000527817 LMAN1LQ9HAT1 526 aa13.6□□□□□ -0.23
SRPRA-202ENST00000527817 CDY1Q9Y6F8 540 aa13.6□□□□□ -0.23
SRPRA-202ENST00000527817 VWA8A3KMH1 1905 aa13.6□□□□□ -0.23
SRPRA-202ENST00000527817 N4BP3O15049 544 aa13.59□□□□□ -0.23
SRPRA-202ENST00000527817 TRAPPC3O43617 180 aa13.59□□□□□ -0.23
SRPRA-202ENST00000527817 FOXD2O60548 495 aaPredicted RBP13.59□□□□□ -0.23
SRPRA-202ENST00000527817 FCARP24071 287 aa13.59□□□□□ -0.23
SRPRA-202ENST00000527817 RARRES1P49788 294 aa13.59□□□□□ -0.23
SRPRA-202ENST00000527817 CCR3P51677 355 aa13.59□□□□□ -0.23
SRPRA-202ENST00000527817 CSRP2Q16527 193 aa13.59□□□□□ -0.23
SRPRA-202ENST00000527817 PRSS36Q5K4E3 855 aa13.59□□□□□ -0.23
SRPRA-202ENST00000527817 ANKS3Q6ZW76 656 aa13.59□□□□□ -0.23
SRPRA-202ENST00000527817 RUFY3Q7L099 469 aa13.59□□□□□ -0.23
SRPRA-202ENST00000527817 POTEDQ86YR6 584 aa13.59□□□□□ -0.23
SRPRA-202ENST00000527817 MAP4K3Q8IVH8 894 aa13.59□□□□□ -0.23
SRPRA-202ENST00000527817 ZNF461Q8TAF7 563 aa13.59□□□□□ -0.23
SRPRA-202ENST00000527817 IRF7Q92985 503 aa13.59□□□□□ -0.23
SRPRA-202ENST00000527817 POLR3FQ9H1D9 316 aaPredicted RBP13.59□□□□□ -0.23
SRPRA-202ENST00000527817 CXCL16Q9H2A7 254 aa13.59□□□□□ -0.23
SRPRA-202ENST00000527817 ZFP14Q9HCL3 533 aa13.59□□□□□ -0.23
SRPRA-202ENST00000527817 ZNF334Q9HCZ1 680 aaPredicted RBP13.59□□□□□ -0.23
SRPRA-202ENST00000527817 SEMA4GQ9NTN9 838 aa13.59□□□□□ -0.23
SRPRA-202ENST00000527817 NDRG2Q9UN36 371 aaKnown RBP13.59□□□□□ -0.23
SRPRA-202ENST00000527817 PCDHA12Q9UN75 941 aa13.59□□□□□ -0.23
SRPRA-202ENST00000527817 RALGAPA1Q6GYQ0 2036 aa13.59□□□□□ -0.23
SRPRA-202ENST00000527817 ARID2Q68CP9 1835 aa13.58□□□□□ -0.24
SRPRA-202ENST00000527817 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.58□□□□□ -0.24
SRPRA-202ENST00000527817 LRRIQ4A6NIV6 560 aa13.58□□□□□ -0.24
SRPRA-202ENST00000527817 ZNF197O14709 1029 aa13.58□□□□□ -0.24
SRPRA-202ENST00000527817 RECQL4O94761 1208 aa13.58□□□□□ -0.24
SRPRA-202ENST00000527817 ABLIM3O94929 683 aa13.58□□□□□ -0.24
SRPRA-202ENST00000527817 CEBPBP17676 345 aa13.58□□□□□ -0.24
SRPRA-202ENST00000527817 IGFBP6P24592 240 aaPredicted RBP13.58□□□□□ -0.24
SRPRA-202ENST00000527817 CNR2P34972 360 aa13.58□□□□□ -0.24
SRPRA-202ENST00000527817 CXCL12P48061 93 aa13.58□□□□□ -0.24
SRPRA-202ENST00000527817 MLLT6P55198 1093 aaPredicted RBP13.58□□□□□ -0.24
SRPRA-202ENST00000527817 LPAL2Q16609 132 aa13.58□□□□□ -0.24
SRPRA-202ENST00000527817 FAM78AQ5JUQ0 283 aa13.58□□□□□ -0.24
SRPRA-202ENST00000527817 CDCA2Q69YH5 1023 aaPredicted RBP13.58□□□□□ -0.24
SRPRA-202ENST00000527817 CD300LGQ6UXG3 332 aa13.58□□□□□ -0.24
SRPRA-202ENST00000527817 PIK3AP1Q6ZUJ8 805 aa13.58□□□□□ -0.24
SRPRA-202ENST00000527817 DDX1Q92499 740 aaKnown RBP13.58□□□□□ -0.24
SRPRA-202ENST00000527817 FAM3CQ92520 227 aa13.58□□□□□ -0.24
SRPRA-202ENST00000527817 PDZD7Q9H5P4 517 aa13.58□□□□□ -0.24
SRPRA-202ENST00000527817 ZSWIM6Q9HCJ5 1215 aa13.58□□□□□ -0.24
SRPRA-202ENST00000527817 TTLL13PA6NNM8 815 aa13.57□□□□□ -0.24
SRPRA-202ENST00000527817 HRO43593 1189 aa13.57□□□□□ -0.24
SRPRA-202ENST00000527817 B3GAT3O94766 335 aa13.57□□□□□ -0.24
SRPRA-202ENST00000527817 LRG1P02750 347 aa13.57□□□□□ -0.24
SRPRA-202ENST00000527817 CHRNB1P11230 501 aa13.57□□□□□ -0.24
SRPRA-202ENST00000527817 XBP1P17861 261 aa13.57□□□□□ -0.24
SRPRA-202ENST00000527817 PSMC3P17980 439 aa13.57□□□□□ -0.24
SRPRA-202ENST00000527817 TKTP29401 623 aaKnown RBP13.57□□□□□ -0.24
SRPRA-202ENST00000527817 ELF1P32519 619 aa13.57□□□□□ -0.24
SRPRA-202ENST00000527817 IRX6P78412 446 aaPredicted RBP13.57□□□□□ -0.24
SRPRA-202ENST00000527817 SIM2Q14190 667 aaPredicted RBP13.57□□□□□ -0.24
SRPRA-202ENST00000527817 GRM2Q14416 872 aa13.57□□□□□ -0.24
SRPRA-202ENST00000527817 SLC8B1Q6J4K2 584 aa13.57□□□□□ -0.24
SRPRA-202ENST00000527817 PRR23CQ6ZRP0 262 aa13.57□□□□□ -0.24
SRPRA-202ENST00000527817 PRR23BQ6ZRT6 265 aa13.57□□□□□ -0.24
SRPRA-202ENST00000527817 NOSTRINQ8IVI9 506 aa13.57□□□□□ -0.24
SRPRA-202ENST00000527817 ZBTB8OSQ8IWT0 167 aa13.57□□□□□ -0.24
SRPRA-202ENST00000527817 TCEAL8Q8IYN2 117 aa13.57□□□□□ -0.24
SRPRA-202ENST00000527817 PIGOQ8TEQ8 1089 aa13.57□□□□□ -0.24
SRPRA-202ENST00000527817 DDX27Q96GQ7 796 aaKnown RBP13.57□□□□□ -0.24
SRPRA-202ENST00000527817 YTHDC1Q96MU7 727 aaKnown RBP13.57□□□□□ -0.24
SRPRA-202ENST00000527817 CCDC43Q96MW1 224 aaKnown RBP13.57□□□□□ -0.24
SRPRA-202ENST00000527817 UROC1Q96N76 676 aa13.57□□□□□ -0.24
SRPRA-202ENST00000527817 ASB16Q96NS5 453 aa13.57□□□□□ -0.24
SRPRA-202ENST00000527817 PPP1R10Q96QC0 940 aaKnown RBP13.57□□□□□ -0.24
SRPRA-202ENST00000527817 ADPGKQ9BRR6 497 aa13.57□□□□□ -0.24
SRPRA-202ENST00000527817 C2orf40Q9H1Z8 148 aa13.57□□□□□ -0.24
SRPRA-202ENST00000527817 SDK1Q7Z5N4 2213 aa13.57□□□□□ -0.24
SRPRA-202ENST00000527817 WDR27A2RRH5 827 aa13.56□□□□□ -0.24
SRPRA-202ENST00000527817 ACKR2O00590 384 aa13.56□□□□□ -0.24
SRPRA-202ENST00000527817 PAPSS2O95340 614 aaPredicted RBP13.56□□□□□ -0.24
SRPRA-202ENST00000527817 ATF2P15336 505 aa13.56□□□□□ -0.24
SRPRA-202ENST00000527817 GDI1P31150 447 aa13.56□□□□□ -0.24
SRPRA-202ENST00000527817 CLCNKBP51801 687 aa13.56□□□□□ -0.24
SRPRA-202ENST00000527817 ROR1Q01973 937 aa13.56□□□□□ -0.24
SRPRA-202ENST00000527817 PRPF4BQ13523 1007 aaKnown RBP13.56□□□□□ -0.24
SRPRA-202ENST00000527817 UPP1Q16831 310 aa13.56□□□□□ -0.24
SRPRA-202ENST00000527817 EARS2Q5JPH6 523 aaKnown RBP13.56□□□□□ -0.24
SRPRA-202ENST00000527817 MFSD6LQ8IWD5 586 aa13.56□□□□□ -0.24
SRPRA-202ENST00000527817 SPEM1Q8N4L4 309 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms