RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 CPSF3Q9UKF6 684 aaKnown RBP20.31■□□□□ 0.84
SMPD1-203ENST00000527275 IPO7O95373 1038 aaKnown RBP20.31■□□□□ 0.84
SMPD1-203ENST00000527275 TRIM49P0CI25 452 aa20.31■□□□□ 0.84
SMPD1-203ENST00000527275 TRIM49CP0CI26 452 aa20.31■□□□□ 0.84
SMPD1-203ENST00000527275 PAK2Q13177 524 aa20.31■□□□□ 0.84
SMPD1-203ENST00000527275 GBP6Q6ZN66 633 aa20.31■□□□□ 0.84
SMPD1-203ENST00000527275 USP38Q8NB14 1042 aa20.31■□□□□ 0.84
SMPD1-203ENST00000527275 PARD3BQ8TEW8 1205 aa20.31■□□□□ 0.84
SMPD1-203ENST00000527275 SYN2Q92777 582 aaPredicted RBP20.31■□□□□ 0.84
SMPD1-203ENST00000527275 HIPK3Q9H422 1215 aa20.31■□□□□ 0.84
SMPD1-203ENST00000527275 SQORQ9Y6N5 450 aa20.31■□□□□ 0.84
SMPD1-203ENST00000527275 URI1O94763 535 aaPredicted RBP20.3■□□□□ 0.84
SMPD1-203ENST00000527275 NPTXRO95502 500 aa20.3■□□□□ 0.84
SMPD1-203ENST00000527275 PON1P27169 355 aa20.3■□□□□ 0.84
SMPD1-203ENST00000527275 WNT7BP56706 349 aa20.3■□□□□ 0.84
SMPD1-203ENST00000527275 SFMBT2Q5VUG0 894 aa20.3■□□□□ 0.84
SMPD1-203ENST00000527275 TWF2Q6IBS0 349 aaKnown RBP20.3■□□□□ 0.84
SMPD1-203ENST00000527275 DPY19L2P1Q6NXN4 242 aa20.3■□□□□ 0.84
SMPD1-203ENST00000527275 POP1Q99575 1024 aaKnown RBP20.3■□□□□ 0.84
SMPD1-203ENST00000527275 ERVK-5Q9HDB9 667 aa20.3■□□□□ 0.84
SMPD1-203ENST00000527275 GTPBP10A4D1E9 387 aaKnown RBP20.29■□□□□ 0.84
SMPD1-203ENST00000527275 ACTN1P12814 892 aa20.29■□□□□ 0.84
SMPD1-203ENST00000527275 EIF4A3P38919 411 aaKnown RBP20.29■□□□□ 0.84
SMPD1-203ENST00000527275 ZNF569Q5MCW4 686 aa20.29■□□□□ 0.84
SMPD1-203ENST00000527275 HAUS4Q9H6D7 363 aa20.29■□□□□ 0.84
SMPD1-203ENST00000527275 PDE11AQ9HCR9 933 aa20.29■□□□□ 0.84
SMPD1-203ENST00000527275 HES2Q9Y543 173 aa20.29■□□□□ 0.84
SMPD1-203ENST00000527275 SLU7O95391 586 aaKnown RBP20.29■□□□□ 0.84
SMPD1-203ENST00000527275 STAG3L1P0CL83 205 aa20.29■□□□□ 0.84
SMPD1-203ENST00000527275 DLATP10515 647 aaKnown RBP20.29■□□□□ 0.84
SMPD1-203ENST00000527275 C1orf220Q5T0J3 134 aa20.29■□□□□ 0.84
SMPD1-203ENST00000527275 UBXN11Q5T124 520 aa20.29■□□□□ 0.84
SMPD1-203ENST00000527275 KLHDC7AQ5VTJ3 777 aa20.29■□□□□ 0.84
SMPD1-203ENST00000527275 UBE2Q1Q7Z7E8 422 aa20.29■□□□□ 0.84
SMPD1-203ENST00000527275 KIAA1328Q86T90 577 aa20.29■□□□□ 0.84
SMPD1-203ENST00000527275 PPP1R12CQ9BZL4 782 aa20.29■□□□□ 0.84
SMPD1-203ENST00000527275 TRIM6Q9C030 488 aaPredicted RBP20.29■□□□□ 0.84
SMPD1-203ENST00000527275 DEF6Q9H4E7 631 aa20.29■□□□□ 0.84
SMPD1-203ENST00000527275 GPNMBQ14956 572 aa20.28■□□□□ 0.84
SMPD1-203ENST00000527275 SPA17Q15506 151 aa20.28■□□□□ 0.84
SMPD1-203ENST00000527275 ENOX2Q16206 610 aaKnown RBP20.28■□□□□ 0.84
SMPD1-203ENST00000527275 DCAF4L1Q3SXM0 396 aa20.28■□□□□ 0.84
SMPD1-203ENST00000527275 ZNF662Q6ZS27 426 aa20.28■□□□□ 0.84
SMPD1-203ENST00000527275 GPIHBP1Q8IV16 184 aa20.28■□□□□ 0.84
SMPD1-203ENST00000527275 IFIH1Q9BYX4 1025 aaKnown RBP20.28■□□□□ 0.84
SMPD1-203ENST00000527275 MYO1AQ9UBC5 1043 aa20.28■□□□□ 0.84
SMPD1-203ENST00000527275 TBX21Q9UL17 535 aa20.28■□□□□ 0.84
SMPD1-203ENST00000527275 CXCL8P10145 99 aa20.28■□□□□ 0.84
SMPD1-203ENST00000527275 MCCD1P59942 119 aaPredicted RBP20.28■□□□□ 0.84
SMPD1-203ENST00000527275 CYP27A1Q02318 531 aa20.28■□□□□ 0.84
SMPD1-203ENST00000527275 PPP3CAQ08209 521 aa20.28■□□□□ 0.84
SMPD1-203ENST00000527275 HSP90AA2PQ14568 343 aaPredicted RBP20.28■□□□□ 0.84
SMPD1-203ENST00000527275 PSMD6Q15008 389 aa20.28■□□□□ 0.84
SMPD1-203ENST00000527275 HGSNATQ68CP4 663 aa20.28■□□□□ 0.84
SMPD1-203ENST00000527275 APBB1IPQ7Z5R6 666 aaPredicted RBP20.28■□□□□ 0.84
SMPD1-203ENST00000527275 BRSK2Q8IWQ3 736 aa20.28■□□□□ 0.84
SMPD1-203ENST00000527275 TMC2Q8TDI7 906 aa20.28■□□□□ 0.84
SMPD1-203ENST00000527275 FAM212AQ96EL1 285 aa20.28■□□□□ 0.84
SMPD1-203ENST00000527275 NXF3Q9H4D5 531 aaKnown RBP20.28■□□□□ 0.84
SMPD1-203ENST00000527275 CHST12Q9NRB3 414 aa20.28■□□□□ 0.84
SMPD1-203ENST00000527275 TMEM39AQ9NV64 488 aa20.28■□□□□ 0.84
SMPD1-203ENST00000527275 GUCA1BQ9UMX6 200 aa20.28■□□□□ 0.84
SMPD1-203ENST00000527275 LRRIQ3A6PVS8 624 aaPredicted RBP20.27■□□□□ 0.84
SMPD1-203ENST00000527275 AKR1B10O60218 316 aa20.27■□□□□ 0.84
SMPD1-203ENST00000527275 NBNO60934 754 aa20.27■□□□□ 0.84
SMPD1-203ENST00000527275 CLTAP09496 248 aa20.27■□□□□ 0.84
SMPD1-203ENST00000527275 CLTBP09497 229 aa20.27■□□□□ 0.84
SMPD1-203ENST00000527275 UCHL3P15374 230 aa20.27■□□□□ 0.84
SMPD1-203ENST00000527275 FMO5P49326 533 aa20.27■□□□□ 0.84
SMPD1-203ENST00000527275 KIF11P52732 1056 aa20.27■□□□□ 0.84
SMPD1-203ENST00000527275 USP37Q86T82 979 aa20.27■□□□□ 0.84
SMPD1-203ENST00000527275 FAM84AQ96KN4 292 aa20.27■□□□□ 0.84
SMPD1-203ENST00000527275 FNBP1Q96RU3 617 aa20.27■□□□□ 0.84
SMPD1-203ENST00000527275 TOPORSQ9NS56 1045 aaPredicted RBP20.27■□□□□ 0.84
SMPD1-203ENST00000527275 GCNT4Q9P109 453 aa20.27■□□□□ 0.84
SMPD1-203ENST00000527275 SSU72P8A0A1W2PR75 194 aa20.27■□□□□ 0.83
SMPD1-203ENST00000527275 ZNF263O14978 683 aa20.27■□□□□ 0.83
SMPD1-203ENST00000527275 MEFVO15553 781 aaPredicted RBP20.27■□□□□ 0.83
SMPD1-203ENST00000527275 MGEA5O60502 916 aa20.27■□□□□ 0.83
SMPD1-203ENST00000527275 SERPING1P05155 500 aa20.27■□□□□ 0.83
SMPD1-203ENST00000527275 ZSCAN20P17040 1043 aaPredicted RBP20.27■□□□□ 0.83
SMPD1-203ENST00000527275 CYP2C18P33260 490 aa20.27■□□□□ 0.83
SMPD1-203ENST00000527275 GCLMP48507 274 aa20.27■□□□□ 0.83
SMPD1-203ENST00000527275 CCL23P55773 120 aa20.27■□□□□ 0.83
SMPD1-203ENST00000527275 MAPK8IP2Q13387 824 aaPredicted RBP20.27■□□□□ 0.83
SMPD1-203ENST00000527275 RAPGEF1Q13905 1077 aa20.27■□□□□ 0.83
SMPD1-203ENST00000527275 CBWD6Q4V339 395 aa20.27■□□□□ 0.83
SMPD1-203ENST00000527275 CBWD3Q5JTY5 395 aa20.27■□□□□ 0.83
SMPD1-203ENST00000527275 CBWD5Q5RIA9 395 aa20.27■□□□□ 0.83
SMPD1-203ENST00000527275 CCDC122Q5T0U0 273 aa20.27■□□□□ 0.83
SMPD1-203ENST00000527275 SCLYQ96I15 445 aa20.27■□□□□ 0.83
SMPD1-203ENST00000527275 ACAP3Q96P50 834 aa20.27■□□□□ 0.83
SMPD1-203ENST00000527275 WNT8AQ9H1J5 351 aa20.27■□□□□ 0.83
SMPD1-203ENST00000527275 RPF1Q9H9Y2 349 aaKnown RBP20.27■□□□□ 0.83
SMPD1-203ENST00000527275 SNTG2Q9NY99 539 aa20.27■□□□□ 0.83
SMPD1-203ENST00000527275 AIPL1Q9NZN9 384 aa20.27■□□□□ 0.83
SMPD1-203ENST00000527275 TRIM10Q9UDY6 481 aa20.27■□□□□ 0.83
SMPD1-203ENST00000527275 TFR2Q9UP52 801 aa20.27■□□□□ 0.83
SMPD1-203ENST00000527275 LCA5LO95447 670 aa20.26■□□□□ 0.83
SMPD1-203ENST00000527275 GRM5P41594 1212 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms