RNA–Protein interactions for RNA: ENST00000527004.5

FOXRED1-207, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 5

Gene FOXRED1, Length 1,760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-207ENST00000527004 ACAD10Q6JQN1 1059 aa17.02■□□□□ 0.32
FOXRED1-207ENST00000527004 LINC01465Q8N7H1 131 aa17.02■□□□□ 0.32
FOXRED1-207ENST00000527004 TRAPPC12Q8WVT3 735 aa17.02■□□□□ 0.32
FOXRED1-207ENST00000527004 TINF2Q9BSI4 451 aa17.02■□□□□ 0.32
FOXRED1-207ENST00000527004 C16orf70Q9BSU1 422 aa17.02■□□□□ 0.32
FOXRED1-207ENST00000527004 GOLPH3Q9H4A6 298 aa17.02■□□□□ 0.32
FOXRED1-207ENST00000527004 PRMT7Q9NVM4 692 aaPredicted RBP17.02■□□□□ 0.32
FOXRED1-207ENST00000527004 RNF216Q9NWF9 866 aaPredicted RBP17.02■□□□□ 0.32
FOXRED1-207ENST00000527004 EHD2Q9NZN4 543 aa17.02■□□□□ 0.32
FOXRED1-207ENST00000527004 CTTNBP2NLQ9P2B4 639 aa17.02■□□□□ 0.32
FOXRED1-207ENST00000527004 COG5Q9UP83 839 aa17.02■□□□□ 0.32
FOXRED1-207ENST00000527004 TNFSF13BQ9Y275 285 aa17.02■□□□□ 0.32
FOXRED1-207ENST00000527004 PHACTR2O75167 634 aa17.02■□□□□ 0.31
FOXRED1-207ENST00000527004 CYP1A2P05177 515 aa17.02■□□□□ 0.31
FOXRED1-207ENST00000527004 ACO1P21399 889 aaKnown RBP17.02■□□□□ 0.31
FOXRED1-207ENST00000527004 TNFRSF8P28908 595 aa17.02■□□□□ 0.31
FOXRED1-207ENST00000527004 PHKA2P46019 1235 aa17.02■□□□□ 0.31
FOXRED1-207ENST00000527004 DNA2P51530 1060 aa17.02■□□□□ 0.31
FOXRED1-207ENST00000527004 TNNC1P63316 161 aa17.02■□□□□ 0.31
FOXRED1-207ENST00000527004 POU5F1Q01860 360 aaKnown RBP17.02■□□□□ 0.31
FOXRED1-207ENST00000527004 MBTD1Q05BQ5 628 aa17.02■□□□□ 0.31
FOXRED1-207ENST00000527004 C8orf74Q6P047 294 aa17.02■□□□□ 0.31
FOXRED1-207ENST00000527004 AFG1LQ8WV93 481 aa17.02■□□□□ 0.31
FOXRED1-207ENST00000527004 NLRP4Q96MN2 994 aa17.02■□□□□ 0.31
FOXRED1-207ENST00000527004 RPS6KC1Q96S38 1066 aa17.02■□□□□ 0.31
FOXRED1-207ENST00000527004 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.02■□□□□ 0.311e-6■□□□□ 10.7
FOXRED1-207ENST00000527004 UBXN6Q9BZV1 441 aa17.02■□□□□ 0.31
FOXRED1-207ENST00000527004 IMPG2Q9BZV3 1241 aa17.02■□□□□ 0.31
FOXRED1-207ENST00000527004 SMARCAL1Q9NZC9 954 aa17.02■□□□□ 0.31
FOXRED1-207ENST00000527004 UVRAGQ9P2Y5 699 aa17.02■□□□□ 0.31
FOXRED1-207ENST00000527004 GTF3C4Q9UKN8 822 aa17.02■□□□□ 0.31
FOXRED1-207ENST00000527004 MYH10P35580 1976 aa17.01■□□□□ 0.31
FOXRED1-207ENST00000527004 ZNFX1Q9P2E3 1918 aaKnown RBP17.01■□□□□ 0.31
FOXRED1-207ENST00000527004 MIF4GDA9UHW6 222 aaKnown RBP17.01■□□□□ 0.31
FOXRED1-207ENST00000527004 INO80B-WBP1J3KQ70 363 aa17.01■□□□□ 0.31
FOXRED1-207ENST00000527004 PGRMC1O00264 195 aaKnown RBP17.01■□□□□ 0.31
FOXRED1-207ENST00000527004 CEP104O60308 925 aa17.01■□□□□ 0.31
FOXRED1-207ENST00000527004 CLTAP09496 248 aa17.01■□□□□ 0.31
FOXRED1-207ENST00000527004 TMOD1P28289 359 aa17.01■□□□□ 0.31
FOXRED1-207ENST00000527004 CLCN3P51790 818 aa17.01■□□□□ 0.31
FOXRED1-207ENST00000527004 NCOA4Q13772 614 aa17.01■□□□□ 0.31
FOXRED1-207ENST00000527004 DUOXA2Q1HG44 320 aa17.01■□□□□ 0.31
FOXRED1-207ENST00000527004 CLEC16AQ2KHT3 1053 aa17.01■□□□□ 0.31
FOXRED1-207ENST00000527004 ZBTB33Q86T24 672 aa17.01■□□□□ 0.31
FOXRED1-207ENST00000527004 OR5B17Q8NGF7 314 aa17.01■□□□□ 0.31
FOXRED1-207ENST00000527004 INO80BQ9C086 356 aaPredicted RBP17.01■□□□□ 0.31
FOXRED1-207ENST00000527004 CARD9Q9H257 536 aa17.01■□□□□ 0.31
FOXRED1-207ENST00000527004 APOBEC3GQ9HC16 384 aaKnown RBP17.01■□□□□ 0.31
FOXRED1-207ENST00000527004 ZCCHC17Q9NP64 241 aaKnown RBP17.01■□□□□ 0.31
FOXRED1-207ENST00000527004 ACP6Q9NPH0 428 aa17.01■□□□□ 0.31
FOXRED1-207ENST00000527004 STIM2Q9P246 746 aa17.01■□□□□ 0.31
FOXRED1-207ENST00000527004 CCDC188H7C350 402 aa17■□□□□ 0.31
FOXRED1-207ENST00000527004 HARSP12081 509 aaKnown RBP17■□□□□ 0.31
FOXRED1-207ENST00000527004 UNGP13051 313 aaPredicted RBP17■□□□□ 0.31
FOXRED1-207ENST00000527004 TNFSF9P41273 254 aa17■□□□□ 0.31
FOXRED1-207ENST00000527004 NOP14P78316 857 aaKnown RBP17■□□□□ 0.31
FOXRED1-207ENST00000527004 ACVR2BQ13705 512 aa17■□□□□ 0.31
FOXRED1-207ENST00000527004 GJC2Q5T442 439 aaPredicted RBP17■□□□□ 0.31
FOXRED1-207ENST00000527004 PPP1R2P3Q6NXS1 205 aa17■□□□□ 0.31
FOXRED1-207ENST00000527004 VIPAS39Q9H9C1 493 aa17■□□□□ 0.31
FOXRED1-207ENST00000527004 ALG6Q9Y672 507 aa17■□□□□ 0.31
FOXRED1-207ENST00000527004 PLXNB2O15031 1838 aa17■□□□□ 0.31
FOXRED1-207ENST00000527004 H3BRB1 525 aa17■□□□□ 0.31
FOXRED1-207ENST00000527004 DDX3YO15523 660 aaKnown RBP17■□□□□ 0.31
FOXRED1-207ENST00000527004 B4GALT4O60513 344 aa17■□□□□ 0.31
FOXRED1-207ENST00000527004 ASS1P00966 412 aaKnown RBP17■□□□□ 0.31
FOXRED1-207ENST00000527004 GPS2Q13227 327 aa17■□□□□ 0.31
FOXRED1-207ENST00000527004 CASP8Q14790 479 aa17■□□□□ 0.31
FOXRED1-207ENST00000527004 SGSM1Q2NKQ1 1148 aa17■□□□□ 0.31
FOXRED1-207ENST00000527004 SEZ6Q53EL9 994 aa17■□□□□ 0.31
FOXRED1-207ENST00000527004 TRIM72Q6ZMU5 477 aa17■□□□□ 0.31
FOXRED1-207ENST00000527004 TRIM11Q96F44 468 aa17■□□□□ 0.31
FOXRED1-207ENST00000527004 TUT1Q9H6E5 874 aaKnown RBP17■□□□□ 0.31
FOXRED1-207ENST00000527004 IFT122Q9HBG6 1241 aa17■□□□□ 0.31
FOXRED1-207ENST00000527004 DMGDHQ9UI17 866 aaKnown RBP17■□□□□ 0.31
FOXRED1-207ENST00000527004 IL18RAPO95256 599 aa16.99■□□□□ 0.31
FOXRED1-207ENST00000527004 MYBL1P10243 752 aa16.99■□□□□ 0.31
FOXRED1-207ENST00000527004 SMPD1P17405 629 aa16.99■□□□□ 0.31
FOXRED1-207ENST00000527004 KYAT1Q16773 422 aa16.99■□□□□ 0.31
FOXRED1-207ENST00000527004 ZNF568Q3ZCX4 644 aa16.99■□□□□ 0.31
FOXRED1-207ENST00000527004 SPOPLQ6IQ16 392 aa16.99■□□□□ 0.31
FOXRED1-207ENST00000527004 MTHFD1LQ6UB35 978 aa16.99■□□□□ 0.31
FOXRED1-207ENST00000527004 IFT20Q8IY31 132 aa16.99■□□□□ 0.31
FOXRED1-207ENST00000527004 HDAC7Q8WUI4 952 aa16.99■□□□□ 0.31
FOXRED1-207ENST00000527004 NAP1L3Q99457 506 aaPredicted RBP16.99■□□□□ 0.31
FOXRED1-207ENST00000527004 NUB1Q9Y5A7 615 aa16.99■□□□□ 0.31
FOXRED1-207ENST00000527004 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.98■□□□□ 0.31
FOXRED1-207ENST00000527004 CYP1A1P04798 512 aaPredicted RBP16.98■□□□□ 0.31
FOXRED1-207ENST00000527004 GJB1P08034 283 aa16.98■□□□□ 0.31
FOXRED1-207ENST00000527004 MMP3P08254 477 aa16.98■□□□□ 0.31
FOXRED1-207ENST00000527004 IGBP1P78318 339 aa16.98■□□□□ 0.31
FOXRED1-207ENST00000527004 TNFAIP2Q03169 654 aa16.98■□□□□ 0.31
FOXRED1-207ENST00000527004 SMC1AQ14683 1233 aaKnown RBP16.98■□□□□ 0.31
FOXRED1-207ENST00000527004 DGKDQ16760 1214 aa16.98■□□□□ 0.31
FOXRED1-207ENST00000527004 CST9Q5W186 159 aa16.98■□□□□ 0.31
FOXRED1-207ENST00000527004 ELMO3Q96BJ8 720 aa16.98■□□□□ 0.31
FOXRED1-207ENST00000527004 FAXDC2Q96IV6 333 aa16.98■□□□□ 0.31
FOXRED1-207ENST00000527004 FAM84AQ96KN4 292 aa16.98■□□□□ 0.31
FOXRED1-207ENST00000527004 ACBD3Q9H3P7 528 aa16.98■□□□□ 0.31
FOXRED1-207ENST00000527004 AVENQ9NQS1 362 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms