RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 SMIM28A0A1B0GU29 152 aa14.87□□□□□ -0.03
CD44-224ENST00000526669 SMTNL1A8MU46 457 aa14.87□□□□□ -0.03
CD44-224ENST00000526669 TLL1O43897 1013 aa14.87□□□□□ -0.03
CD44-224ENST00000526669 B4GALT3O60512 393 aa14.87□□□□□ -0.03
CD44-224ENST00000526669 MYOGP15173 224 aa14.87□□□□□ -0.03
CD44-224ENST00000526669 TNNI1P19237 187 aa14.87□□□□□ -0.03
CD44-224ENST00000526669 BMP8BP34820 402 aa14.87□□□□□ -0.03
CD44-224ENST00000526669 MTIF2P46199 727 aaKnown RBP14.87□□□□□ -0.03
CD44-224ENST00000526669 VAMP7P51809 220 aa14.87□□□□□ -0.03
CD44-224ENST00000526669 TFAMQ00059 246 aaKnown RBP14.87□□□□□ -0.03
CD44-224ENST00000526669 RNASELQ05823 741 aaKnown RBP14.87□□□□□ -0.03
CD44-224ENST00000526669 BFSP1Q12934 665 aa14.87□□□□□ -0.03
CD44-224ENST00000526669 TMEM132DQ14C87 1099 aa14.87□□□□□ -0.03
CD44-224ENST00000526669 GAS2L3Q86XJ1 694 aa14.87□□□□□ -0.03
CD44-224ENST00000526669 TDHQ8IZJ6 230 aa14.87□□□□□ -0.03
CD44-224ENST00000526669 GSTCDQ8NEC7 633 aa14.87□□□□□ -0.03
CD44-224ENST00000526669 PARD3BQ8TEW8 1205 aa14.87□□□□□ -0.03
CD44-224ENST00000526669 TMEM174Q8WUU8 243 aa14.87□□□□□ -0.03
CD44-224ENST00000526669 CGRRF1Q99675 332 aa14.87□□□□□ -0.03
CD44-224ENST00000526669 MKNK1Q9BUB5 465 aa14.87□□□□□ -0.03
CD44-224ENST00000526669 RC3H2Q9HBD1 1191 aaKnown RBP14.87□□□□□ -0.03
CD44-224ENST00000526669 TBC1D13Q9NVG8 400 aa14.87□□□□□ -0.03
CD44-224ENST00000526669 TUBGCP4Q9UGJ1 667 aa14.87□□□□□ -0.03
CD44-224ENST00000526669 ARMCX3Q9UH62 379 aaPredicted RBP14.87□□□□□ -0.03
CD44-224ENST00000526669 RANBP2P49792 3224 aaKnown RBP14.87□□□□□ -0.03
CD44-224ENST00000526669 COL4A4P53420 1690 aaPredicted RBP14.87□□□□□ -0.03
CD44-224ENST00000526669 LCHNA4D1U4 455 aa14.86□□□□□ -0.03
CD44-224ENST00000526669 CASTOR2A6NHX0 329 aa14.86□□□□□ -0.03
CD44-224ENST00000526669 KCNJ18B7U540 433 aa14.86□□□□□ -0.03
CD44-224ENST00000526669 IKBKBO14920 756 aa14.86□□□□□ -0.03
CD44-224ENST00000526669 MAPK13O15264 365 aa14.86□□□□□ -0.03
CD44-224ENST00000526669 DDHD2O94830 711 aa14.86□□□□□ -0.03
CD44-224ENST00000526669 THP07101 528 aa14.86□□□□□ -0.03
CD44-224ENST00000526669 TMEM191BP0C7N4 346 aa14.86□□□□□ -0.03
CD44-224ENST00000526669 SOX4Q06945 474 aaPredicted RBP14.86□□□□□ -0.03
CD44-224ENST00000526669 GRIK3Q13003 919 aa14.86□□□□□ -0.03
CD44-224ENST00000526669 BTG3Q14201 252 aaPredicted RBP14.86□□□□□ -0.03
CD44-224ENST00000526669 KCNJ12Q14500 433 aa14.86□□□□□ -0.03
CD44-224ENST00000526669 HSP90AA2PQ14568 343 aaPredicted RBP14.86□□□□□ -0.03
CD44-224ENST00000526669 XKR4Q5GH76 650 aa14.86□□□□□ -0.03
CD44-224ENST00000526669 C1orf220Q5T0J3 134 aa14.86□□□□□ -0.03
CD44-224ENST00000526669 SPOUT1Q5T280 376 aaKnown RBP14.86□□□□□ -0.03
CD44-224ENST00000526669 INTS8Q75QN2 995 aaKnown RBP14.86□□□□□ -0.03
CD44-224ENST00000526669 FRMD5Q7Z6J6 570 aa14.86□□□□□ -0.03
CD44-224ENST00000526669 ZNF280BQ86YH2 543 aa14.86□□□□□ -0.03
CD44-224ENST00000526669 FAM114A1Q8IWE2 563 aa14.86□□□□□ -0.03
CD44-224ENST00000526669 OR5B17Q8NGF7 314 aa14.86□□□□□ -0.03
CD44-224ENST00000526669 PHOSPHO2Q8TCD6 241 aa14.86□□□□□ -0.03
CD44-224ENST00000526669 RABGGTAQ92696 567 aa14.86□□□□□ -0.03
CD44-224ENST00000526669 ZNF689Q96CS4 500 aaPredicted RBP14.86□□□□□ -0.03
CD44-224ENST00000526669 BORCS6Q96GS4 357 aa14.86□□□□□ -0.03
CD44-224ENST00000526669 FAM193BQ96PV7 902 aaPredicted RBP14.86□□□□□ -0.03
CD44-224ENST00000526669 PPP1R10Q96QC0 940 aaKnown RBP14.86□□□□□ -0.03
CD44-224ENST00000526669 MTMR12Q9C0I1 747 aa14.86□□□□□ -0.03
CD44-224ENST00000526669 HSD3B7Q9H2F3 369 aa14.86□□□□□ -0.03
CD44-224ENST00000526669 ASB7Q9H672 318 aa14.86□□□□□ -0.03
CD44-224ENST00000526669 PLEKHA5Q9HAU0 1116 aa14.86□□□□□ -0.03
CD44-224ENST00000526669 MAGEC2Q9UBF1 373 aaPredicted RBP14.86□□□□□ -0.03
CD44-224ENST00000526669 ZC3H11AO75152 810 aaKnown RBP eCLIP14.85□□□□□ -0.03
CD44-224ENST00000526669 GNA14O95837 355 aa14.85□□□□□ -0.03
CD44-224ENST00000526669 ATP1A3P13637 1013 aa14.85□□□□□ -0.03
CD44-224ENST00000526669 KCNE1P15382 129 aa14.85□□□□□ -0.03
CD44-224ENST00000526669 HTRA4P83105 476 aaPredicted RBP14.85□□□□□ -0.03
CD44-224ENST00000526669 SURF1Q15526 300 aa14.85□□□□□ -0.03
CD44-224ENST00000526669 CDKAL1Q5VV42 579 aa14.85□□□□□ -0.03
CD44-224ENST00000526669 SCARA3Q6AZY7 606 aa14.85□□□□□ -0.03
CD44-224ENST00000526669 CD302Q8IX05 232 aa14.85□□□□□ -0.03
CD44-224ENST00000526669 LRRC43Q8N309 656 aa14.85□□□□□ -0.03
CD44-224ENST00000526669 TMC2Q8TDI7 906 aa14.85□□□□□ -0.03
CD44-224ENST00000526669 ZNF516Q92618 1163 aa14.85□□□□□ -0.03
CD44-224ENST00000526669 ANKRD36BP1Q96IX9 119 aa14.85□□□□□ -0.03
CD44-224ENST00000526669 MRPL9Q9BYD2 267 aaKnown RBP14.85□□□□□ -0.03
CD44-224ENST00000526669 PRO3102Q9H379 93 aa14.85□□□□□ -0.03
CD44-224ENST00000526669 NRDE2Q9H7Z3 1164 aa14.85□□□□□ -0.03
CD44-224ENST00000526669 METTL14Q9HCE5 456 aaKnown RBP14.85□□□□□ -0.03
CD44-224ENST00000526669 TAB2Q9NYJ8 693 aa14.85□□□□□ -0.03
CD44-224ENST00000526669 DNAJB4Q9UDY4 337 aa14.85□□□□□ -0.03
CD44-224ENST00000526669 MRPL42Q9Y6G3 142 aaKnown RBP14.85□□□□□ -0.03
CD44-224ENST00000526669 GOLGA6L19H0YKK7 550 aa14.84□□□□□ -0.03
CD44-224ENST00000526669 PES1O00541 588 aaKnown RBP14.84□□□□□ -0.03
CD44-224ENST00000526669 INPPL1O15357 1258 aa14.84□□□□□ -0.03
CD44-224ENST00000526669 ARHGEF15O94989 841 aa14.84□□□□□ -0.03
CD44-224ENST00000526669 CAVIN2O95810 425 aa14.84□□□□□ -0.03
CD44-224ENST00000526669 TNNC2P02585 160 aa14.84□□□□□ -0.03
CD44-224ENST00000526669 PRKCSHP14314 528 aaPredicted RBP14.84□□□□□ -0.03
CD44-224ENST00000526669 CDK11BP21127 795 aaKnown RBP14.84□□□□□ -0.03
CD44-224ENST00000526669 PBX2P40425 430 aa14.84□□□□□ -0.03
CD44-224ENST00000526669 PBX3P40426 434 aa14.84□□□□□ -0.03
CD44-224ENST00000526669 GCLMP48507 274 aa14.84□□□□□ -0.03
CD44-224ENST00000526669 POU5F1Q01860 360 aaKnown RBP14.84□□□□□ -0.03
CD44-224ENST00000526669 PPP3CAQ08209 521 aa14.84□□□□□ -0.03
CD44-224ENST00000526669 NAB2Q15742 525 aa14.84□□□□□ -0.03
CD44-224ENST00000526669 TCP11X2Q5H9J9 407 aa14.84□□□□□ -0.03
CD44-224ENST00000526669 WDR49Q8IV35 697 aa14.84□□□□□ -0.03
CD44-224ENST00000526669 TRIM59Q8IWR1 403 aa14.84□□□□□ -0.03
CD44-224ENST00000526669 CMTR2Q8IYT2 770 aaKnown RBP14.84□□□□□ -0.03
CD44-224ENST00000526669 BEST2Q8NFU1 509 aa14.84□□□□□ -0.03
CD44-224ENST00000526669 RAD9AQ99638 391 aa14.84□□□□□ -0.03
CD44-224ENST00000526669 PAAF1Q9BRP4 392 aa14.84□□□□□ -0.03
CD44-224ENST00000526669 ANP32EQ9BTT0 268 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms