RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 RPL9P32969 192 aaKnown RBP16.44■□□□□ 0.22
SF3B2-202ENST00000524475 TNFSF9P41273 254 aa16.44■□□□□ 0.22
SF3B2-202ENST00000524475 ERVFC1P60507 584 aa16.44■□□□□ 0.22
SF3B2-202ENST00000524475 KNOP1Q1ED39 458 aaKnown RBP16.44■□□□□ 0.22
SF3B2-202ENST00000524475 TPRNQ4KMQ1 711 aa16.44■□□□□ 0.22
SF3B2-202ENST00000524475 SEZ6Q53EL9 994 aa16.44■□□□□ 0.22
SF3B2-202ENST00000524475 GLRA4Q5JXX5 417 aa16.44■□□□□ 0.22
SF3B2-202ENST00000524475 ZBTB41Q5SVQ8 909 aa16.44■□□□□ 0.22
SF3B2-202ENST00000524475 CRELD2Q6UXH1 353 aaPredicted RBP16.44■□□□□ 0.22
SF3B2-202ENST00000524475 HS2ST1Q7LGA3 356 aa16.44■□□□□ 0.22
SF3B2-202ENST00000524475 NT5DC4Q86YG4 428 aa16.44■□□□□ 0.22
SF3B2-202ENST00000524475 DDX27Q96GQ7 796 aaKnown RBP16.44■□□□□ 0.22
SF3B2-202ENST00000524475 FBXL18Q96ME1 805 aa16.44■□□□□ 0.22
SF3B2-202ENST00000524475 CDCA3Q99618 268 aaPredicted RBP16.44■□□□□ 0.22
SF3B2-202ENST00000524475 HERC2P3Q9BVR0 1158 aa16.44■□□□□ 0.22
SF3B2-202ENST00000524475 VN1R3Q9BXE9 311 aa16.44■□□□□ 0.22
SF3B2-202ENST00000524475 IKZF4Q9H2S9 585 aa16.44■□□□□ 0.22
SF3B2-202ENST00000524475 KIAA1586Q9HCI6 787 aa16.44■□□□□ 0.22
SF3B2-202ENST00000524475 RMND1Q9NWS8 449 aa16.44■□□□□ 0.22
SF3B2-202ENST00000524475 ADAM28Q9UKQ2 775 aa16.44■□□□□ 0.22
SF3B2-202ENST00000524475 PRG3Q9Y2Y8 225 aaPredicted RBP16.44■□□□□ 0.22
SF3B2-202ENST00000524475 C2CD2Q9Y426 696 aa16.44■□□□□ 0.22
SF3B2-202ENST00000524475 IL18RAPO95256 599 aa16.43■□□□□ 0.22
SF3B2-202ENST00000524475 SMC2O95347 1197 aa16.43■□□□□ 0.22
SF3B2-202ENST00000524475 LRPAP1P30533 357 aa16.43■□□□□ 0.22
SF3B2-202ENST00000524475 IRS1P35568 1242 aa16.43■□□□□ 0.22
SF3B2-202ENST00000524475 ELAVL2Q12926 359 aaKnown RBP16.43■□□□□ 0.22
SF3B2-202ENST00000524475 SMC1AQ14683 1233 aaKnown RBP16.43■□□□□ 0.22
SF3B2-202ENST00000524475 UPP1Q16831 310 aa16.43■□□□□ 0.22
SF3B2-202ENST00000524475 COBLL1Q53SF7 1204 aa16.43■□□□□ 0.22
SF3B2-202ENST00000524475 TCEAL5Q5H9L2 206 aa16.43■□□□□ 0.22
SF3B2-202ENST00000524475 ARMCX5Q6P1M9 558 aa16.43■□□□□ 0.22
SF3B2-202ENST00000524475 BRSK2Q8IWQ3 736 aa16.43■□□□□ 0.22
SF3B2-202ENST00000524475 TCF25Q9BQ70 676 aa16.43■□□□□ 0.22
SF3B2-202ENST00000524475 CBWD1Q9BRT8 395 aa16.43■□□□□ 0.22
SF3B2-202ENST00000524475 ENTPD7Q9NQZ7 604 aa16.43■□□□□ 0.22
SF3B2-202ENST00000524475 AGPAT3Q9NRZ7 376 aa16.43■□□□□ 0.22
SF3B2-202ENST00000524475 UBQLN1Q9UMX0 589 aaKnown RBP16.43■□□□□ 0.22
SF3B2-202ENST00000524475 SF3B1O75533 1304 aaKnown RBP eCLIP16.43■□□□□ 0.221e-6■■■■■ 64.6
SF3B2-202ENST00000524475 CASTOR2A6NHX0 329 aa16.42■□□□□ 0.22
SF3B2-202ENST00000524475 LACTBL1A8MY62 500 aa16.42■□□□□ 0.22
SF3B2-202ENST00000524475 ACOT2P49753 483 aa16.42■□□□□ 0.22
SF3B2-202ENST00000524475 SOX4Q06945 474 aaPredicted RBP16.42■□□□□ 0.22
SF3B2-202ENST00000524475 PNOCQ13519 176 aa16.42■□□□□ 0.22
SF3B2-202ENST00000524475 MYBPC2Q14324 1141 aa16.42■□□□□ 0.22
SF3B2-202ENST00000524475 FUT10Q6P4F1 479 aa16.42■□□□□ 0.22
SF3B2-202ENST00000524475 DCLRE1AQ6PJP8 1040 aa16.42■□□□□ 0.22
SF3B2-202ENST00000524475 TMC7Q7Z402 723 aa16.42■□□□□ 0.22
SF3B2-202ENST00000524475 SLC9A9Q8IVB4 645 aa16.42■□□□□ 0.22
SF3B2-202ENST00000524475 VPS52Q8N1B4 723 aa16.42■□□□□ 0.22
SF3B2-202ENST00000524475 GPD1LQ8N335 351 aa16.42■□□□□ 0.22
SF3B2-202ENST00000524475 MICALL1Q8N3F8 863 aa16.42■□□□□ 0.22
SF3B2-202ENST00000524475 GUF1Q8N442 669 aaKnown RBP16.42■□□□□ 0.22
SF3B2-202ENST00000524475 MRPL43Q8N983 215 aaKnown RBP16.42■□□□□ 0.22
SF3B2-202ENST00000524475 GBP4Q96PP9 640 aa16.42■□□□□ 0.22
SF3B2-202ENST00000524475 PAAF1Q9BRP4 392 aa16.42■□□□□ 0.22
SF3B2-202ENST00000524475 KCTD10Q9H3F6 313 aa16.42■□□□□ 0.22
SF3B2-202ENST00000524475 CHST7Q9NS84 486 aa16.42■□□□□ 0.22
SF3B2-202ENST00000524475 COG5Q9UP83 839 aa16.42■□□□□ 0.22
SF3B2-202ENST00000524475 SSX2IPQ9Y2D8 614 aa16.42■□□□□ 0.22
SF3B2-202ENST00000524475 PDXKO00764 312 aa16.41■□□□□ 0.22
SF3B2-202ENST00000524475 LILRB3O75022 631 aa16.41■□□□□ 0.22
SF3B2-202ENST00000524475 PRPF40AO75400 957 aaKnown RBP16.41■□□□□ 0.22
SF3B2-202ENST00000524475 TADA2AO75478 443 aa16.41■□□□□ 0.22
SF3B2-202ENST00000524475 KIF4AO95239 1232 aa16.41■□□□□ 0.22
SF3B2-202ENST00000524475 PAX3P23760 479 aa16.41■□□□□ 0.22
SF3B2-202ENST00000524475 CLCNKBP51801 687 aa16.41■□□□□ 0.22
SF3B2-202ENST00000524475 DSG1Q02413 1049 aa16.41■□□□□ 0.22
SF3B2-202ENST00000524475 NFIL3Q16649 462 aa16.41■□□□□ 0.22
SF3B2-202ENST00000524475 CTC1Q2NKJ3 1217 aa16.41■□□□□ 0.22
SF3B2-202ENST00000524475 SPATA1Q5VX52 437 aa16.41■□□□□ 0.22
SF3B2-202ENST00000524475 PABPC5Q96DU9 382 aaKnown RBP16.41■□□□□ 0.22
SF3B2-202ENST00000524475 KIF12Q96FN5 646 aa16.41■□□□□ 0.22
SF3B2-202ENST00000524475 FAM213AQ9BRX8 229 aa16.41■□□□□ 0.22
SF3B2-202ENST00000524475 HSPBP1Q9NZL4 362 aa16.41■□□□□ 0.22
SF3B2-202ENST00000524475 C2orf71A6NGG8 1288 aa16.4■□□□□ 0.22
SF3B2-202ENST00000524475 F8W810 466 aa16.4■□□□□ 0.22
SF3B2-202ENST00000524475 TRAPPC3O43617 180 aa16.4■□□□□ 0.22
SF3B2-202ENST00000524475 C1RP00736 705 aa16.4■□□□□ 0.22
SF3B2-202ENST00000524475 HYAL1Q12794 435 aa16.4■□□□□ 0.22
SF3B2-202ENST00000524475 TMEM132DQ14C87 1099 aa16.4■□□□□ 0.22
SF3B2-202ENST00000524475 PTPN14Q15678 1187 aa16.4■□□□□ 0.22
SF3B2-202ENST00000524475 CCDC85BQ15834 202 aaPredicted RBP16.4■□□□□ 0.22
SF3B2-202ENST00000524475 DUSP6Q16828 381 aa16.4■□□□□ 0.22
SF3B2-202ENST00000524475 USP41Q3LFD5 358 aa16.4■□□□□ 0.22
SF3B2-202ENST00000524475 PLPP4Q5VZY2 271 aa16.4■□□□□ 0.22
SF3B2-202ENST00000524475 CD300LGQ6UXG3 332 aa16.4■□□□□ 0.22
SF3B2-202ENST00000524475 NELFCDQ8IXH7 590 aa16.4■□□□□ 0.22
SF3B2-202ENST00000524475 XXYLT1Q8NBI6 393 aa16.4■□□□□ 0.22
SF3B2-202ENST00000524475 BEST2Q8NFU1 509 aa16.4■□□□□ 0.22
SF3B2-202ENST00000524475 MICAL1Q8TDZ2 1067 aa16.4■□□□□ 0.22
SF3B2-202ENST00000524475 SMARCE1Q969G3 411 aa16.4■□□□□ 0.22
SF3B2-202ENST00000524475 C18orf25Q96B23 403 aaPredicted RBP16.4■□□□□ 0.22
SF3B2-202ENST00000524475 SAAL1Q96ER3 474 aa16.4■□□□□ 0.22
SF3B2-202ENST00000524475 GOLGA2P5Q9HBQ8 144 aa16.4■□□□□ 0.22
SF3B2-202ENST00000524475 DMAC2Q9NW81 257 aa16.4■□□□□ 0.22
SF3B2-202ENST00000524475 RBAKQ9NYW8 714 aaPredicted RBP16.4■□□□□ 0.22
SF3B2-202ENST00000524475 TRAF3IP3Q9Y228 551 aa16.4■□□□□ 0.22
SF3B2-202ENST00000524475 PCDHA5Q9Y5H7 936 aa16.4■□□□□ 0.22
SF3B2-202ENST00000524475 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms