RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 KIAA0753Q2KHM9 967 aa8.44□□□□□ -1.06
SPIDR-223ENST00000524033 LACTB2Q53H82 288 aaPredicted RBP8.44□□□□□ -1.06
SPIDR-223ENST00000524033 GNASQ5JWF2 1037 aa8.44□□□□□ -1.06
SPIDR-223ENST00000524033 CEP85LQ5SZL2 805 aa8.44□□□□□ -1.06
SPIDR-223ENST00000524033 KCTD16Q68DU8 428 aa8.44□□□□□ -1.06
SPIDR-223ENST00000524033 LIAT1Q6ZQX7 453 aa8.44□□□□□ -1.06
SPIDR-223ENST00000524033 TMC3Q7Z5M5 1100 aa8.44□□□□□ -1.06
SPIDR-223ENST00000524033 OTUD6BQ8N6M0 293 aa8.44□□□□□ -1.06
SPIDR-223ENST00000524033 METTL13Q8N6R0 699 aa8.44□□□□□ -1.06
SPIDR-223ENST00000524033 FAM133AQ8N9E0 248 aa8.44□□□□□ -1.06
SPIDR-223ENST00000524033 ATP8B4Q8TF62 1192 aa8.44□□□□□ -1.06
SPIDR-223ENST00000524033 CRYGNQ8WXF5 182 aa8.44□□□□□ -1.06
SPIDR-223ENST00000524033 TAF4BQ92750 862 aa8.44□□□□□ -1.06
SPIDR-223ENST00000524033 BADQ92934 168 aa8.44□□□□□ -1.06
SPIDR-223ENST00000524033 VTI1AQ96AJ9 217 aa8.44□□□□□ -1.06
SPIDR-223ENST00000524033 LENG1Q96BZ8 264 aaPredicted RBP8.44□□□□□ -1.06
SPIDR-223ENST00000524033 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.44□□□□□ -1.064e-7■□□□□ 9
SPIDR-223ENST00000524033 UBA5Q9GZZ9 404 aa8.44□□□□□ -1.06
SPIDR-223ENST00000524033 ABHD16BQ9H3Z7 469 aa8.44□□□□□ -1.06
SPIDR-223ENST00000524033 RABEP2Q9H5N1 569 aa8.44□□□□□ -1.06
SPIDR-223ENST00000524033 ACAD9Q9H845 621 aa8.44□□□□□ -1.06
SPIDR-223ENST00000524033 JMJD4Q9H9V9 463 aa8.44□□□□□ -1.06
SPIDR-223ENST00000524033 SPC25Q9HBM1 224 aa8.44□□□□□ -1.06
SPIDR-223ENST00000524033 CNOT8Q9UFF9 292 aaKnown RBP8.44□□□□□ -1.06
SPIDR-223ENST00000524033 AJAP1Q9UKB5 411 aaPredicted RBP8.44□□□□□ -1.06
SPIDR-223ENST00000524033 MTMR7Q9Y216 660 aa8.44□□□□□ -1.06
SPIDR-223ENST00000524033 NOC2LQ9Y3T9 749 aaKnown RBP8.44□□□□□ -1.06
SPIDR-223ENST00000524033 BZW2Q9Y6E2 419 aaKnown RBP8.44□□□□□ -1.06
SPIDR-223ENST00000524033 CAPN7Q9Y6W3 813 aa8.44□□□□□ -1.06
SPIDR-223ENST00000524033 VCANP13611 3396 aa8.44□□□□□ -1.06
SPIDR-223ENST00000524033 MYH11P35749 1972 aa8.44□□□□□ -1.06
SPIDR-223ENST00000524033 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.43□□□□□ -1.06
SPIDR-223ENST00000524033 GTPBP10A4D1E9 387 aaKnown RBP8.43□□□□□ -1.06
SPIDR-223ENST00000524033 DCDC2CA8MYV0 355 aa8.43□□□□□ -1.06
SPIDR-223ENST00000524033 F8VZ95 297 aa8.43□□□□□ -1.06
SPIDR-223ENST00000524033 DDX3XO00571 662 aaKnown RBP eCLIP8.43□□□□□ -1.06
SPIDR-223ENST00000524033 DDX3YO15523 660 aaKnown RBP8.43□□□□□ -1.06
SPIDR-223ENST00000524033 ADAMTS4O75173 837 aa8.43□□□□□ -1.06
SPIDR-223ENST00000524033 PPFIA2O75334 1257 aa8.43□□□□□ -1.06
SPIDR-223ENST00000524033 CLTBP09497 229 aa8.43□□□□□ -1.06
SPIDR-223ENST00000524033 C6orf222P0C671 652 aaPredicted RBP8.43□□□□□ -1.06
SPIDR-223ENST00000524033 GHRP10912 638 aa8.43□□□□□ -1.06
SPIDR-223ENST00000524033 ALAS1P13196 640 aa8.43□□□□□ -1.06
SPIDR-223ENST00000524033 UCHL3P15374 230 aa8.43□□□□□ -1.06
SPIDR-223ENST00000524033 DRD4P21917 467 aa8.43□□□□□ -1.06
SPIDR-223ENST00000524033 HOXD13P35453 343 aa8.43□□□□□ -1.06
SPIDR-223ENST00000524033 SHHQ15465 462 aa8.43□□□□□ -1.06
SPIDR-223ENST00000524033 UBE2SQ16763 222 aa8.43□□□□□ -1.06
SPIDR-223ENST00000524033 TKFCQ3LXA3 575 aa8.43□□□□□ -1.06
SPIDR-223ENST00000524033 ARSHQ5FYA8 562 aa8.43□□□□□ -1.06
SPIDR-223ENST00000524033 CCDC174Q6PII3 467 aa8.43□□□□□ -1.06
SPIDR-223ENST00000524033 ARMCX2Q7L311 632 aa8.43□□□□□ -1.06
SPIDR-223ENST00000524033 ANKRD33Q7Z3H0 272 aa8.43□□□□□ -1.06
SPIDR-223ENST00000524033 RPAINQ86UA6 219 aa8.43□□□□□ -1.06
SPIDR-223ENST00000524033 NT5DC3Q86UY8 548 aa8.43□□□□□ -1.06
SPIDR-223ENST00000524033 TAX1BP1Q86VP1 789 aa8.43□□□□□ -1.06
SPIDR-223ENST00000524033 GPBP1Q86WP2 473 aa8.43□□□□□ -1.06
SPIDR-223ENST00000524033 DEPDC4Q8N2C3 294 aa8.43□□□□□ -1.06
SPIDR-223ENST00000524033 PCSK9Q8NBP7 692 aaKnown RBP8.43□□□□□ -1.06
SPIDR-223ENST00000524033 KLHDC9Q8NEP7 349 aa8.43□□□□□ -1.06
SPIDR-223ENST00000524033 SLC30A5Q8TAD4 765 aa8.43□□□□□ -1.06
SPIDR-223ENST00000524033 DCAF4Q8WV16 495 aa8.43□□□□□ -1.06
SPIDR-223ENST00000524033 IFT81Q8WYA0 676 aa8.43□□□□□ -1.06
SPIDR-223ENST00000524033 PBXIP1Q96AQ6 731 aa8.43□□□□□ -1.06
SPIDR-223ENST00000524033 CENPTQ96BT3 561 aa8.43□□□□□ -1.06
SPIDR-223ENST00000524033 BORCS6Q96GS4 357 aa8.43□□□□□ -1.06
SPIDR-223ENST00000524033 HES6Q96HZ4 224 aa8.43□□□□□ -1.06
SPIDR-223ENST00000524033 TOX2Q96NM4 488 aa8.43□□□□□ -1.06
SPIDR-223ENST00000524033 MYCBPQ99417 103 aaPredicted RBP8.43□□□□□ -1.06
SPIDR-223ENST00000524033 EPB41L4BQ9H329 900 aa8.43□□□□□ -1.06
SPIDR-223ENST00000524033 STARD7Q9NQZ5 370 aa8.43□□□□□ -1.06
SPIDR-223ENST00000524033 PDLIM7Q9NR12 457 aa8.43□□□□□ -1.06
SPIDR-223ENST00000524033 RNF146Q9NTX7 359 aa8.43□□□□□ -1.06
SPIDR-223ENST00000524033 TMEM39AQ9NV64 488 aa8.43□□□□□ -1.06
SPIDR-223ENST00000524033 MTMR10Q9NXD2 777 aa8.43□□□□□ -1.06
SPIDR-223ENST00000524033 DDX25Q9UHL0 483 aaKnown RBP8.43□□□□□ -1.06
SPIDR-223ENST00000524033 NAGPAQ9UK23 515 aa8.43□□□□□ -1.06
SPIDR-223ENST00000524033 PRR12Q9ULL5 1215 aa8.43□□□□□ -1.06
SPIDR-223ENST00000524033 DOLKQ9UPQ8 538 aa8.43□□□□□ -1.06
SPIDR-223ENST00000524033 MAFBQ9Y5Q3 323 aaPredicted RBP8.43□□□□□ -1.06
SPIDR-223ENST00000524033 ZNF536O15090 1300 aa8.43□□□□□ -1.06
SPIDR-223ENST00000524033 FRMPD2Q68DX3 1309 aaPredicted RBP8.43□□□□□ -1.06
SPIDR-223ENST00000524033 PRUNE2Q8WUY3 3088 aa8.43□□□□□ -1.06
SPIDR-223ENST00000524033 CDH23Q9H251 3354 aa8.42□□□□□ -1.06
SPIDR-223ENST00000524033 GMNCA6NCL1 334 aa8.42□□□□□ -1.06
SPIDR-223ENST00000524033 ASB14A6NK59 587 aa8.42□□□□□ -1.06
SPIDR-223ENST00000524033 E9PMD0 336 aa8.42□□□□□ -1.06
SPIDR-223ENST00000524033 PDXKO00764 312 aa8.42□□□□□ -1.06
SPIDR-223ENST00000524033 KCNK3O14649 394 aa8.42□□□□□ -1.06
SPIDR-223ENST00000524033 CETN3O15182 167 aa8.42□□□□□ -1.06
SPIDR-223ENST00000524033 SART1O43290 800 aaKnown RBP8.42□□□□□ -1.06
SPIDR-223ENST00000524033 MED24O75448 989 aa8.42□□□□□ -1.06
SPIDR-223ENST00000524033 AFPP02771 609 aaKnown RBP8.42□□□□□ -1.06
SPIDR-223ENST00000524033 ASGR1P07306 291 aa8.42□□□□□ -1.06
SPIDR-223ENST00000524033 ACTN1P12814 892 aa8.42□□□□□ -1.06
SPIDR-223ENST00000524033 RAG1P15918 1043 aa8.42□□□□□ -1.06
SPIDR-223ENST00000524033 SLC9A1P19634 815 aa8.42□□□□□ -1.06
SPIDR-223ENST00000524033 PON1P27169 355 aa8.42□□□□□ -1.06
SPIDR-223ENST00000524033 SLC16A2P36021 539 aa8.42□□□□□ -1.06
SPIDR-223ENST00000524033 FLT3P36888 993 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms