RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 PLPP4Q5VZY2 271 aa13.66□□□□□ -0.22
VEGFA-225ENST00000523950 ARMCX5Q6P1M9 558 aa13.66□□□□□ -0.22
VEGFA-225ENST00000523950 FUT10Q6P4F1 479 aa13.66□□□□□ -0.22
VEGFA-225ENST00000523950 DCLRE1AQ6PJP8 1040 aa13.66□□□□□ -0.22
VEGFA-225ENST00000523950 CLEC17AQ6ZS10 378 aa13.66□□□□□ -0.22
VEGFA-225ENST00000523950 HS2ST1Q7LGA3 356 aa13.66□□□□□ -0.22
VEGFA-225ENST00000523950 NT5DC4Q86YG4 428 aa13.66□□□□□ -0.22
VEGFA-225ENST00000523950 MRPL43Q8N983 215 aaKnown RBP13.66□□□□□ -0.22
VEGFA-225ENST00000523950 GLIS3Q8NEA6 775 aa13.66□□□□□ -0.22
VEGFA-225ENST00000523950 GOLGA5Q8TBA6 731 aa13.66□□□□□ -0.22
VEGFA-225ENST00000523950 HLA-CQ95604 372 aa13.66□□□□□ -0.22
VEGFA-225ENST00000523950 PABPC5Q96DU9 382 aaKnown RBP13.66□□□□□ -0.22
VEGFA-225ENST00000523950 ZMAT2Q96NC0 199 aaKnown RBP13.66□□□□□ -0.22
VEGFA-225ENST00000523950 GTPBP4Q9BZE4 634 aaKnown RBP13.66□□□□□ -0.22
VEGFA-225ENST00000523950 CXCL16Q9H2A7 254 aa13.66□□□□□ -0.22
VEGFA-225ENST00000523950 KIAA1586Q9HCI6 787 aa13.66□□□□□ -0.22
VEGFA-225ENST00000523950 SLC39A2Q9NP94 309 aa13.66□□□□□ -0.22
VEGFA-225ENST00000523950 RMND1Q9NWS8 449 aa13.66□□□□□ -0.22
VEGFA-225ENST00000523950 UBQLN1Q9UMX0 589 aaKnown RBP13.66□□□□□ -0.22
VEGFA-225ENST00000523950 TISP43B9A030 160 aa13.65□□□□□ -0.22
VEGFA-225ENST00000523950 MEFVO15553 781 aaPredicted RBP13.65□□□□□ -0.22
VEGFA-225ENST00000523950 EXTL3O43909 919 aa13.65□□□□□ -0.22
VEGFA-225ENST00000523950 KINO60870 393 aaKnown RBP13.65□□□□□ -0.22
VEGFA-225ENST00000523950 IL18RAPO95256 599 aa13.65□□□□□ -0.22
VEGFA-225ENST00000523950 URODP06132 367 aa13.65□□□□□ -0.22
VEGFA-225ENST00000523950 PRR29P0C7W0 189 aa13.65□□□□□ -0.22
VEGFA-225ENST00000523950 PAX3P23760 479 aa13.65□□□□□ -0.22
VEGFA-225ENST00000523950 HOXD13P35453 343 aa13.65□□□□□ -0.22
VEGFA-225ENST00000523950 HYAL1Q12794 435 aa13.65□□□□□ -0.22
VEGFA-225ENST00000523950 ZBTB6Q15916 424 aa13.65□□□□□ -0.22
VEGFA-225ENST00000523950 DUSP6Q16828 381 aa13.65□□□□□ -0.22
VEGFA-225ENST00000523950 UPP1Q16831 310 aa13.65□□□□□ -0.22
VEGFA-225ENST00000523950 KNOP1Q1ED39 458 aaKnown RBP13.65□□□□□ -0.22
VEGFA-225ENST00000523950 AAK1Q2M2I8 961 aa13.65□□□□□ -0.22
VEGFA-225ENST00000523950 ZBTB41Q5SVQ8 909 aa13.65□□□□□ -0.22
VEGFA-225ENST00000523950 C12orf56Q8IXR9 622 aa13.65□□□□□ -0.22
VEGFA-225ENST00000523950 GPD1LQ8N335 351 aa13.65□□□□□ -0.22
VEGFA-225ENST00000523950 EFHBQ8N7U6 833 aa13.65□□□□□ -0.22
VEGFA-225ENST00000523950 KIAA0895Q8NCT3 520 aa13.65□□□□□ -0.22
VEGFA-225ENST00000523950 ATXN2LQ8WWM7 1075 aaKnown RBP13.65□□□□□ -0.22
VEGFA-225ENST00000523950 VN1R3Q9BXE9 311 aa13.65□□□□□ -0.22
VEGFA-225ENST00000523950 TLE6Q9H808 572 aa13.65□□□□□ -0.22
VEGFA-225ENST00000523950 C2CD2Q9Y426 696 aa13.65□□□□□ -0.22
VEGFA-225ENST00000523950 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.64□□□□□ -0.23
VEGFA-225ENST00000523950 C2orf71A6NGG8 1288 aa13.64□□□□□ -0.23
VEGFA-225ENST00000523950 LACTBL1A8MY62 500 aa13.64□□□□□ -0.23
VEGFA-225ENST00000523950 TGFB1I1O43294 461 aa13.64□□□□□ -0.23
VEGFA-225ENST00000523950 TRAPPC3O43617 180 aa13.64□□□□□ -0.23
VEGFA-225ENST00000523950 B3GAT3O94766 335 aa13.64□□□□□ -0.23
VEGFA-225ENST00000523950 CSPG5O95196 566 aa13.64□□□□□ -0.23
VEGFA-225ENST00000523950 KIF4AO95239 1232 aa13.64□□□□□ -0.23
VEGFA-225ENST00000523950 SMC2O95347 1197 aa13.64□□□□□ -0.23
VEGFA-225ENST00000523950 CXCL14O95715 111 aa13.64□□□□□ -0.23
VEGFA-225ENST00000523950 SRGAP2BP0DMP2 458 aa13.64□□□□□ -0.23
VEGFA-225ENST00000523950 LRPAP1P30533 357 aa13.64□□□□□ -0.23
VEGFA-225ENST00000523950 GLUD2P49448 558 aa13.64□□□□□ -0.23
VEGFA-225ENST00000523950 ACOT2P49753 483 aa13.64□□□□□ -0.23
VEGFA-225ENST00000523950 CLCNKBP51801 687 aa13.64□□□□□ -0.23
VEGFA-225ENST00000523950 DSG1Q02413 1049 aa13.64□□□□□ -0.23
VEGFA-225ENST00000523950 CREMQ03060 361 aa13.64□□□□□ -0.23
VEGFA-225ENST00000523950 STK4Q13043 487 aa13.64□□□□□ -0.23
VEGFA-225ENST00000523950 SURF1Q15526 300 aa13.64□□□□□ -0.23
VEGFA-225ENST00000523950 PTPN14Q15678 1187 aa13.64□□□□□ -0.23
VEGFA-225ENST00000523950 CTC1Q2NKJ3 1217 aa13.64□□□□□ -0.23
VEGFA-225ENST00000523950 USP41Q3LFD5 358 aa13.64□□□□□ -0.23
VEGFA-225ENST00000523950 PDXDC1Q6P996 788 aa13.64□□□□□ -0.23
VEGFA-225ENST00000523950 CRELD2Q6UXH1 353 aaPredicted RBP13.64□□□□□ -0.23
VEGFA-225ENST00000523950 ADGRD2Q7Z7M1 963 aa13.64□□□□□ -0.23
VEGFA-225ENST00000523950 BRSK2Q8IWQ3 736 aa13.64□□□□□ -0.23
VEGFA-225ENST00000523950 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.64□□□□□ -0.233e-13■■□□□ 13.7
VEGFA-225ENST00000523950 BEST2Q8NFU1 509 aa13.64□□□□□ -0.23
VEGFA-225ENST00000523950 TMEM174Q8WUU8 243 aa13.64□□□□□ -0.23
VEGFA-225ENST00000523950 KIF12Q96FN5 646 aa13.64□□□□□ -0.23
VEGFA-225ENST00000523950 GSDMAQ96QA5 445 aa13.64□□□□□ -0.23
VEGFA-225ENST00000523950 PAAF1Q9BRP4 392 aa13.64□□□□□ -0.23
VEGFA-225ENST00000523950 CBWD1Q9BRT8 395 aa13.64□□□□□ -0.23
VEGFA-225ENST00000523950 FAM213AQ9BRX8 229 aa13.64□□□□□ -0.23
VEGFA-225ENST00000523950 EMILIN2Q9BXX0 1053 aa13.64□□□□□ -0.23
VEGFA-225ENST00000523950 IKZF4Q9H2S9 585 aa13.64□□□□□ -0.23
VEGFA-225ENST00000523950 UBE2ZQ9H832 354 aaPredicted RBP13.64□□□□□ -0.23
VEGFA-225ENST00000523950 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.64□□□□□ -0.23
VEGFA-225ENST00000523950 MRPL17Q9NRX2 175 aaKnown RBP13.64□□□□□ -0.23
VEGFA-225ENST00000523950 AGPAT3Q9NRZ7 376 aa13.64□□□□□ -0.23
VEGFA-225ENST00000523950 CHST7Q9NS84 486 aa13.64□□□□□ -0.23
VEGFA-225ENST00000523950 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.63□□□□□ -0.23
VEGFA-225ENST00000523950 PODXLO00592 558 aa13.63□□□□□ -0.23
VEGFA-225ENST00000523950 C1RP00736 705 aa13.63□□□□□ -0.23
VEGFA-225ENST00000523950 NRIP1P48552 1158 aa13.63□□□□□ -0.23
VEGFA-225ENST00000523950 SOX4Q06945 474 aaPredicted RBP13.63□□□□□ -0.23
VEGFA-225ENST00000523950 TMEM132DQ14C87 1099 aa13.63□□□□□ -0.23
VEGFA-225ENST00000523950 SPATA1Q5VX52 437 aa13.63□□□□□ -0.23
VEGFA-225ENST00000523950 KIAA1841Q6NSI8 718 aa13.63□□□□□ -0.23
VEGFA-225ENST00000523950 TMEM184AQ6ZMB5 413 aa13.63□□□□□ -0.23
VEGFA-225ENST00000523950 PPFIBP1Q86W92 1011 aa13.63□□□□□ -0.23
VEGFA-225ENST00000523950 NELFCDQ8IXH7 590 aa13.63□□□□□ -0.23
VEGFA-225ENST00000523950 FBXL18Q96ME1 805 aa13.63□□□□□ -0.23
VEGFA-225ENST00000523950 GBP4Q96PP9 640 aa13.63□□□□□ -0.23
VEGFA-225ENST00000523950 RBAKQ9NYW8 714 aaPredicted RBP13.63□□□□□ -0.23
VEGFA-225ENST00000523950 HSPBP1Q9NZL4 362 aa13.63□□□□□ -0.23
VEGFA-225ENST00000523950 ZNF233A6NK53 670 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms