RNA–Protein interactions for RNA: ENST00000523655.1

SREK1-213, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 5

Gene SREK1, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-213	ENST00000523655	MFSD5	Q6N075	450 aa		5.96	□□□□□ -1.46
SREK1-213	ENST00000523655	LHFPL2	Q6ZUX7	228 aa		5.96	□□□□□ -1.46
SREK1-213	ENST00000523655	C14orf80	Q86SX3	495 aa		5.96	□□□□□ -1.46
SREK1-213	ENST00000523655	VRK3	Q8IV63	474 aa		5.96	□□□□□ -1.46
SREK1-213	ENST00000523655	SLC41A1	Q8IVJ1	513 aa		5.96	□□□□□ -1.46
SREK1-213	ENST00000523655	CMIP	Q8IY22	773 aa		5.96	□□□□□ -1.46
SREK1-213	ENST00000523655	ZNF276	Q8N554	614 aa		5.96	□□□□□ -1.46
SREK1-213	ENST00000523655	AMER2	Q8N7J2	671 aa		5.96	□□□□□ -1.46
SREK1-213	ENST00000523655	WDR66	Q8TBY9	1149 aa		5.96	□□□□□ -1.46
SREK1-213	ENST00000523655	CPT1C	Q8TCG5	803 aa		5.96	□□□□□ -1.46
SREK1-213	ENST00000523655	SLC5A5	Q92911	643 aa		5.96	□□□□□ -1.46
SREK1-213	ENST00000523655	CAMKK2	Q96RR4	588 aa		5.96	□□□□□ -1.46
SREK1-213	ENST00000523655	AGAP2	Q99490	1192 aa		5.96	□□□□□ -1.46
SREK1-213	ENST00000523655	TTPAL	Q9BTX7	342 aa		5.96	□□□□□ -1.46
SREK1-213	ENST00000523655	CDH19	Q9H159	772 aa		5.96	□□□□□ -1.46
SREK1-213	ENST00000523655	ZIM2	Q9NZV7	527 aa		5.96	□□□□□ -1.46
SREK1-213	ENST00000523655	C11orf21	Q9P2W6	132 aa		5.96	□□□□□ -1.46
SREK1-213	ENST00000523655	PRSS50	Q9UI38	385 aa		5.96	□□□□□ -1.46
SREK1-213	ENST00000523655	KDM5C	P41229	1560 aa		5.96	□□□□□ -1.46
SREK1-213	ENST00000523655	E2F8	A0AVK6	867 aa		5.95	□□□□□ -1.46
SREK1-213	ENST00000523655	GPR39	O43194	453 aa		5.95	□□□□□ -1.46
SREK1-213	ENST00000523655	IPO13	O94829	963 aa	Known RBP	5.95	□□□□□ -1.46
SREK1-213	ENST00000523655	MYL1	P05976	194 aa		5.95	□□□□□ -1.46
SREK1-213	ENST00000523655	ATF3	P18847	181 aa		5.95	□□□□□ -1.46
SREK1-213	ENST00000523655	STRN3	Q13033	797 aa		5.95	□□□□□ -1.46
SREK1-213	ENST00000523655	MRPL49	Q13405	166 aa	Known RBP	5.95	□□□□□ -1.46
SREK1-213	ENST00000523655	ANKS6	Q68DC2	871 aa		5.95	□□□□□ -1.46
SREK1-213	ENST00000523655	FRMD7	Q6ZUT3	714 aa		5.95	□□□□□ -1.46
SREK1-213	ENST00000523655	HTR3D	Q70Z44	454 aa		5.95	□□□□□ -1.46
SREK1-213	ENST00000523655	TAS1R1	Q7RTX1	841 aa		5.95	□□□□□ -1.46
SREK1-213	ENST00000523655	MRGPRE	Q86SM8	312 aa		5.95	□□□□□ -1.46
SREK1-213	ENST00000523655	SAMD3	Q8N6K7	520 aa		5.95	□□□□□ -1.46
SREK1-213	ENST00000523655	TTC8	Q8TAM2	541 aa		5.95	□□□□□ -1.46
SREK1-213	ENST00000523655	SLC25A43	Q8WUT9	341 aa	Predicted RBP	5.95	□□□□□ -1.46
SREK1-213	ENST00000523655	ZNF700	Q9H0M5	742 aa		5.95	□□□□□ -1.46
SREK1-213	ENST00000523655	TOPORS	Q9NS56	1045 aa	Predicted RBP	5.95	□□□□□ -1.46
SREK1-213	ENST00000523655	USP36	Q9P275	1121 aa	Known RBP	5.95	□□□□□ -1.46
SREK1-213	ENST00000523655	MSH6	P52701	1360 aa		5.94	□□□□□ -1.46
SREK1-213	ENST00000523655	GOLGA6L6	A8MZA4	724 aa		5.94	□□□□□ -1.46
SREK1-213	ENST00000523655	AHRR	A9YTQ3	701 aa		5.94	□□□□□ -1.46
SREK1-213	ENST00000523655	LEFTY2	O00292	366 aa		5.94	□□□□□ -1.46
SREK1-213	ENST00000523655	NEMP1	O14524	444 aa		5.94	□□□□□ -1.46
SREK1-213	ENST00000523655	BRINP1	O60477	761 aa		5.94	□□□□□ -1.46
SREK1-213	ENST00000523655	PRAMEF4	O60810	478 aa		5.94	□□□□□ -1.46
SREK1-213	ENST00000523655	TMEM127	O75204	238 aa		5.94	□□□□□ -1.46
SREK1-213	ENST00000523655	SCAF4	O95104	1147 aa	Known RBP	5.94	□□□□□ -1.46
SREK1-213	ENST00000523655	APOBEC3A	P31941	199 aa	Predicted RBP	5.94	□□□□□ -1.46
SREK1-213	ENST00000523655	LGALS4	P56470	323 aa		5.94	□□□□□ -1.46
SREK1-213	ENST00000523655	OS9	Q13438	667 aa	Predicted RBP	5.94	□□□□□ -1.46
SREK1-213	ENST00000523655	PIN1	Q13526	163 aa	Predicted RBP	5.94	□□□□□ -1.46
SREK1-213	ENST00000523655	STAT4	Q14765	748 aa		5.94	□□□□□ -1.46
SREK1-213	ENST00000523655	ATP13A4	Q4VNC1	1196 aa		5.94	□□□□□ -1.46
SREK1-213	ENST00000523655	C4orf46	Q504U0	113 aa		5.94	□□□□□ -1.46
SREK1-213	ENST00000523655	NXN	Q6DKJ4	435 aa		5.94	□□□□□ -1.46
SREK1-213	ENST00000523655	PCSK4	Q6UW60	755 aa		5.94	□□□□□ -1.46
SREK1-213	ENST00000523655	LMBR1L	Q6UX01	489 aa		5.94	□□□□□ -1.46
SREK1-213	ENST00000523655	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	5.94	□□□□□ -1.46
SREK1-213	ENST00000523655	LILRA3	Q8N6C8	439 aa	Predicted RBP	5.94	□□□□□ -1.46
SREK1-213	ENST00000523655	EAF2	Q96CJ1	260 aa	Predicted RBP	5.94	□□□□□ -1.46
SREK1-213	ENST00000523655	EVI5L	Q96CN4	794 aa		5.94	□□□□□ -1.46
SREK1-213	ENST00000523655	TEX101	Q9BY14	249 aa		5.94	□□□□□ -1.46
SREK1-213	ENST00000523655	PUS7L	Q9H0K6	701 aa	Known RBP	5.94	□□□□□ -1.46
SREK1-213	ENST00000523655	KCTD10	Q9H3F6	313 aa		5.94	□□□□□ -1.46
SREK1-213	ENST00000523655	NOC2L	Q9Y3T9	749 aa	Known RBP	5.94	□□□□□ -1.46
SREK1-213	ENST00000523655	NUMBL	Q9Y6R0	609 aa		5.94	□□□□□ -1.46
SREK1-213	ENST00000523655	SCAF11	Q99590	1463 aa	Known RBP	5.94	□□□□□ -1.46
SREK1-213	ENST00000523655	SHPRH	Q149N8	1683 aa		5.94	□□□□□ -1.46
SREK1-213	ENST00000523655	ITSN2	Q9NZM3	1697 aa		5.94	□□□□□ -1.46
SREK1-213	ENST00000523655	WDR33	Q9C0J8	1336 aa	Known RBP	5.94	□□□□□ -1.46
SREK1-213	ENST00000523655	UGGT1	Q9NYU2	1555 aa		5.93	□□□□□ -1.46
SREK1-213	ENST00000523655	RTEL1-TNFRSF6B	F6WH68	1400 aa		5.93	□□□□□ -1.46
SREK1-213	ENST00000523655	LPXN	O60711	386 aa		5.93	□□□□□ -1.46
SREK1-213	ENST00000523655	XPA	P23025	273 aa	Predicted RBP	5.93	□□□□□ -1.46
SREK1-213	ENST00000523655	INHBC	P55103	352 aa		5.93	□□□□□ -1.46
SREK1-213	ENST00000523655	CCT2	P78371	535 aa	Known RBP	5.93	□□□□□ -1.46
SREK1-213	ENST00000523655	DUSP2	Q05923	314 aa		5.93	□□□□□ -1.46
SREK1-213	ENST00000523655	ITK	Q08881	620 aa		5.93	□□□□□ -1.46
SREK1-213	ENST00000523655	KRTAP15-1	Q3LI76	137 aa		5.93	□□□□□ -1.46
SREK1-213	ENST00000523655	C11orf74	Q86VG3	221 aa		5.93	□□□□□ -1.46
SREK1-213	ENST00000523655	SPATS2	Q86XZ4	545 aa	Known RBP	5.93	□□□□□ -1.46
SREK1-213	ENST00000523655	TCEAL8	Q8IYN2	117 aa		5.93	□□□□□ -1.46
SREK1-213	ENST00000523655	OR52N2	Q8NGI0	321 aa		5.93	□□□□□ -1.46
SREK1-213	ENST00000523655	GPR150	Q8NGU9	434 aa		5.93	□□□□□ -1.46
SREK1-213	ENST00000523655	CHMP4C	Q96CF2	233 aa		5.93	□□□□□ -1.46
SREK1-213	ENST00000523655	HOOK2	Q96ED9	719 aa		5.93	□□□□□ -1.46
SREK1-213	ENST00000523655	MTMR8	Q96EF0	704 aa		5.93	□□□□□ -1.46
SREK1-213	ENST00000523655	IL17RA	Q96F46	866 aa		5.93	□□□□□ -1.46
SREK1-213	ENST00000523655	RTFDC1	Q9BY42	306 aa	Predicted RBP	5.93	□□□□□ -1.46
SREK1-213	ENST00000523655	CCDC8	Q9H0W5	538 aa	Predicted RBP	5.93	□□□□□ -1.46
SREK1-213	ENST00000523655	VTA1	Q9NP79	307 aa		5.93	□□□□□ -1.46
SREK1-213	ENST00000523655	CHST12	Q9NRB3	414 aa		5.93	□□□□□ -1.46
SREK1-213	ENST00000523655	DMRT1	Q9Y5R6	373 aa		5.93	□□□□□ -1.46
SREK1-213	ENST00000523655	NUP153	P49790	1475 aa	Known RBP	5.92	□□□□□ -1.46
SREK1-213	ENST00000523655	WNT10B	O00744	389 aa		5.92	□□□□□ -1.46
SREK1-213	ENST00000523655	HSPA6	P17066	643 aa		5.92	□□□□□ -1.46
SREK1-213	ENST00000523655	BPI	P17213	487 aa		5.92	□□□□□ -1.46
SREK1-213	ENST00000523655	GZMK	P49863	264 aa		5.92	□□□□□ -1.46
SREK1-213	ENST00000523655	OCRL	Q01968	901 aa		5.92	□□□□□ -1.46
SREK1-213	ENST00000523655	VPS72	Q15906	364 aa		5.92	□□□□□ -1.46
SREK1-213	ENST00000523655	SYCP2L	Q5T4T6	812 aa		5.92	□□□□□ -1.46

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