RNA–Protein interactions for RNA: ENST00000523004.1

GM2A-202, Transcript of GM2 ganglioside activator, humanhuman

TSL 1 (best)

Gene GM2A, Length 643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GM2A-202ENST00000523004 RTL10Q7L3V2 364 aa8.68□□□□□ -1.02
GM2A-202ENST00000523004 C1orf210Q8IVY1 113 aa8.68□□□□□ -1.02
GM2A-202ENST00000523004 ERMNQ8TAM6 284 aa8.68□□□□□ -1.02
GM2A-202ENST00000523004 DEPTORQ8TB45 409 aa8.68□□□□□ -1.02
GM2A-202ENST00000523004 SLC7A14Q8TBB6 771 aa8.68□□□□□ -1.02
GM2A-202ENST00000523004 SHDQ96IW2 340 aa8.68□□□□□ -1.02
GM2A-202ENST00000523004 PPP1R10Q96QC0 940 aaKnown RBP8.68□□□□□ -1.02
GM2A-202ENST00000523004 DDX23Q9BUQ8 820 aaKnown RBP8.68□□□□□ -1.02
GM2A-202ENST00000523004 FOXQ1Q9C009 403 aa8.68□□□□□ -1.02
GM2A-202ENST00000523004 MTRRQ9UBK8 725 aa8.68□□□□□ -1.02
GM2A-202ENST00000523004 GDAQ9Y2T3 454 aa8.68□□□□□ -1.02
GM2A-202ENST00000523004 R4GN57 208 aa8.68□□□□□ -1.02
GM2A-202ENST00000523004 KANSL1LA0AUZ9 987 aa8.67□□□□□ -1.02
GM2A-202ENST00000523004 GOLGA6L22H0YM25 854 aa8.67□□□□□ -1.02
GM2A-202ENST00000523004 B3GAT3O94766 335 aa8.67□□□□□ -1.02
GM2A-202ENST00000523004 OR52Z1P0C646 297 aa8.67□□□□□ -1.02
GM2A-202ENST00000523004 IGFBP6P24592 240 aaPredicted RBP8.67□□□□□ -1.02
GM2A-202ENST00000523004 NEK4P51957 841 aa8.67□□□□□ -1.02
GM2A-202ENST00000523004 NUCB2P80303 420 aa8.67□□□□□ -1.02
GM2A-202ENST00000523004 SNW1Q13573 536 aaKnown RBP8.67□□□□□ -1.02
GM2A-202ENST00000523004 SAFBQ15424 915 aaKnown RBP eCLIP8.67□□□□□ -1.02
GM2A-202ENST00000523004 NFKBIBQ15653 356 aa8.67□□□□□ -1.02
GM2A-202ENST00000523004 ECM1Q16610 540 aa8.67□□□□□ -1.02
GM2A-202ENST00000523004 UPP1Q16831 310 aa8.67□□□□□ -1.02
GM2A-202ENST00000523004 DCAF4L1Q3SXM0 396 aa8.67□□□□□ -1.02
GM2A-202ENST00000523004 NT5DC1Q5TFE4 455 aa8.67□□□□□ -1.02
GM2A-202ENST00000523004 ATF7IP2Q5U623 682 aa8.67□□□□□ -1.02
GM2A-202ENST00000523004 ZC3H14Q6PJT7 736 aaKnown RBP8.67□□□□□ -1.02
GM2A-202ENST00000523004 RSPO2Q6UXX9 243 aaPredicted RBP8.67□□□□□ -1.02
GM2A-202ENST00000523004 ANKS3Q6ZW76 656 aa8.67□□□□□ -1.02
GM2A-202ENST00000523004 NPAS3Q8IXF0 933 aa8.67□□□□□ -1.02
GM2A-202ENST00000523004 MAML2Q8IZL2 1156 aaPredicted RBP8.67□□□□□ -1.02
GM2A-202ENST00000523004 ITFG1Q8TB96 612 aa8.67□□□□□ -1.02
GM2A-202ENST00000523004 KCNG4Q8TDN1 519 aa8.67□□□□□ -1.02
GM2A-202ENST00000523004 KIFAP3Q92845 792 aa8.67□□□□□ -1.02
GM2A-202ENST00000523004 UROC1Q96N76 676 aa8.67□□□□□ -1.02
GM2A-202ENST00000523004 KIF2CQ99661 725 aa8.67□□□□□ -1.02
GM2A-202ENST00000523004 KIFC3Q9BVG8 833 aa8.67□□□□□ -1.02
GM2A-202ENST00000523004 OSBPL6Q9BZF3 934 aa8.67□□□□□ -1.02
GM2A-202ENST00000523004 HCFC1R1Q9NWW0 138 aa8.67□□□□□ -1.02
GM2A-202ENST00000523004 DNMT3BQ9UBC3 853 aaKnown RBP8.67□□□□□ -1.02
GM2A-202ENST00000523004 KCNH3Q9ULD8 1083 aa8.67□□□□□ -1.02
GM2A-202ENST00000523004 POLIQ9UNA4 740 aa8.67□□□□□ -1.02
GM2A-202ENST00000523004 TNFSF13BQ9Y275 285 aa8.67□□□□□ -1.02
GM2A-202ENST00000523004 BACE2Q9Y5Z0 518 aa8.67□□□□□ -1.02
GM2A-202ENST00000523004 PATJQ8NI35 1801 aa8.66□□□□□ -1.02
GM2A-202ENST00000523004 SMIM28A0A1B0GU29 152 aa8.66□□□□□ -1.02
GM2A-202ENST00000523004 TRAPPC3O43617 180 aa8.66□□□□□ -1.02
GM2A-202ENST00000523004 LRRN2O75325 713 aa8.66□□□□□ -1.02
GM2A-202ENST00000523004 LIG1P18858 919 aa8.66□□□□□ -1.02
GM2A-202ENST00000523004 TKTP29401 623 aaKnown RBP8.66□□□□□ -1.02
GM2A-202ENST00000523004 FXR2P51116 673 aaKnown RBP eCLIP8.66□□□□□ -1.02
GM2A-202ENST00000523004 CLCNKBP51801 687 aa8.66□□□□□ -1.02
GM2A-202ENST00000523004 PFKPQ01813 784 aa8.66□□□□□ -1.02
GM2A-202ENST00000523004 GUCY1B3Q02153 619 aa8.66□□□□□ -1.02
GM2A-202ENST00000523004 PRKCQQ04759 706 aa8.66□□□□□ -1.02
GM2A-202ENST00000523004 PDIA5Q14554 519 aa8.66□□□□□ -1.02
GM2A-202ENST00000523004 ZNF174Q15697 407 aa8.66□□□□□ -1.02
GM2A-202ENST00000523004 MLF2Q15773 248 aaPredicted RBP8.66□□□□□ -1.02
GM2A-202ENST00000523004 ZNF528Q3MIS6 628 aa8.66□□□□□ -1.02
GM2A-202ENST00000523004 PABPC1LQ4VXU2 614 aaKnown RBP8.66□□□□□ -1.02
GM2A-202ENST00000523004 SLC44A4Q53GD3 710 aa8.66□□□□□ -1.02
GM2A-202ENST00000523004 XKR4Q5GH76 650 aa8.66□□□□□ -1.02
GM2A-202ENST00000523004 GLRA4Q5JXX5 417 aa8.66□□□□□ -1.02
GM2A-202ENST00000523004 HAUS3Q68CZ6 603 aa8.66□□□□□ -1.02
GM2A-202ENST00000523004 ALKAL1Q6UXT8 129 aa8.66□□□□□ -1.02
GM2A-202ENST00000523004 C4orf32Q8N8J7 132 aa8.66□□□□□ -1.02
GM2A-202ENST00000523004 SUMF1Q8NBK3 374 aa8.66□□□□□ -1.02
GM2A-202ENST00000523004 C3orf58Q8NDZ4 430 aa8.66□□□□□ -1.02
GM2A-202ENST00000523004 DDX27Q96GQ7 796 aaKnown RBP8.66□□□□□ -1.02
GM2A-202ENST00000523004 IFT74Q96LB3 600 aa8.66□□□□□ -1.02
GM2A-202ENST00000523004 BHMT2Q9H2M3 363 aa8.66□□□□□ -1.02
GM2A-202ENST00000523004 FOXP1Q9H334 677 aaPredicted RBP8.66□□□□□ -1.02
GM2A-202ENST00000523004 GOLGA2P5Q9HBQ8 144 aa8.66□□□□□ -1.02
GM2A-202ENST00000523004 POLD4Q9HCU8 107 aa8.66□□□□□ -1.02
GM2A-202ENST00000523004 PTPRHQ9HD43 1115 aa8.66□□□□□ -1.02
GM2A-202ENST00000523004 AVENQ9NQS1 362 aaPredicted RBP8.66□□□□□ -1.02
GM2A-202ENST00000523004 CDY1Q9Y6F8 540 aa8.66□□□□□ -1.02
GM2A-202ENST00000523004 SPTBN2O15020 2390 aa8.66□□□□□ -1.02
GM2A-202ENST00000523004 COL4A3Q01955 1670 aa8.65□□□□□ -1.02
GM2A-202ENST00000523004 TPRP12270 2363 aaKnown RBP8.65□□□□□ -1.02
GM2A-202ENST00000523004 ARHGEF37A1IGU5 675 aa8.65□□□□□ -1.02
GM2A-202ENST00000523004 FAM170BA6NMN3 283 aa8.65□□□□□ -1.02
GM2A-202ENST00000523004 K7ERI5 159 aa8.65□□□□□ -1.02
GM2A-202ENST00000523004 ABLIM3O94929 683 aa8.65□□□□□ -1.02
GM2A-202ENST00000523004 RHOP08100 348 aa8.65□□□□□ -1.02
GM2A-202ENST00000523004 CCT6AP40227 531 aaKnown RBP8.65□□□□□ -1.02
GM2A-202ENST00000523004 GRM5P41594 1212 aa8.65□□□□□ -1.02
GM2A-202ENST00000523004 BRCC3P46736 316 aa8.65□□□□□ -1.02
GM2A-202ENST00000523004 TRAPPC10P48553 1259 aa8.65□□□□□ -1.02
GM2A-202ENST00000523004 SOX4Q06945 474 aaPredicted RBP8.65□□□□□ -1.02
GM2A-202ENST00000523004 SLC5A9Q2M3M2 681 aa8.65□□□□□ -1.02
GM2A-202ENST00000523004 TTC38Q5R3I4 469 aa8.65□□□□□ -1.02
GM2A-202ENST00000523004 SLC8B1Q6J4K2 584 aa8.65□□□□□ -1.02
GM2A-202ENST00000523004 POTEHQ6S545 545 aa8.65□□□□□ -1.02
GM2A-202ENST00000523004 APBB1IPQ7Z5R6 666 aaPredicted RBP8.65□□□□□ -1.02
GM2A-202ENST00000523004 KIAA2013Q8IYS2 634 aa8.65□□□□□ -1.02
GM2A-202ENST00000523004 CEP120Q8N960 986 aa8.65□□□□□ -1.02
GM2A-202ENST00000523004 IGSF22Q8N9C0 903 aa8.65□□□□□ -1.02
GM2A-202ENST00000523004 FBXO18Q8NFZ0 1043 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms